RNA–Protein interactions for RNA: ENSMUST00000188167.1

Gm28955-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28955, Length 2,166 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28955-201ENSMUST00000188167 Chic1Q8CBW7 227 aa16.6■□□□□ 0.25
Gm28955-201ENSMUST00000188167 Mapk8ip2Q9ERE9 830 aa16■□□□□ 0.15
Gm28955-201ENSMUST00000188167 Phf23Q8BSN5 401 aa14.95□□□□□ -0.02
Gm28955-201ENSMUST00000188167 NischQ80TM9 1593 aa14.87□□□□□ -0.03
Gm28955-201ENSMUST00000188167 Gm35339A0A140LHH9 1649 aa14.77□□□□□ -0.04
Gm28955-201ENSMUST00000188167 Plppr3Q7TPB0 716 aa14.51□□□□□ -0.09
Gm28955-201ENSMUST00000188167 Ube2uB1AUC4 352 aa14.49□□□□□ -0.09
Gm28955-201ENSMUST00000188167 DiexfQ8BTT6 772 aaKnown RBP14.46□□□□□ -0.09
Gm28955-201ENSMUST00000188167 Abcc9P70170 1546 aa14.4□□□□□ -0.1
Gm28955-201ENSMUST00000188167 Gab3Q8BSM5 595 aa14.32□□□□□ -0.12
Gm28955-201ENSMUST00000188167 Abcc8B2RUS7 1588 aa14.24□□□□□ -0.13
Gm28955-201ENSMUST00000188167 CatipB9EKE5 520 aa13.9□□□□□ -0.18
Gm28955-201ENSMUST00000188167 Ttbk1Q6PCN3 1308 aa13.78□□□□□ -0.2
Gm28955-201ENSMUST00000188167 Senp3Q9EP97 568 aaKnown RBP13.74□□□□□ -0.21
Gm28955-201ENSMUST00000188167 Rhox8Q6VSS7 320 aa13.66□□□□□ -0.22
Gm28955-201ENSMUST00000188167 ScribQ80U72 1612 aa13.46□□□□□ -0.25
Gm28955-201ENSMUST00000188167 Amer1Q7TS75 1132 aa13.41□□□□□ -0.26
Gm28955-201ENSMUST00000188167 Kcna4Q61423 654 aa13.38□□□□□ -0.27
Gm28955-201ENSMUST00000188167 Myt1Q8CFC2 1127 aa13.31□□□□□ -0.28
Gm28955-201ENSMUST00000188167 ArxO35085 564 aa13.28□□□□□ -0.28
Gm28955-201ENSMUST00000188167 Dcaf1Q80TR8 1506 aa13.18□□□□□ -0.3
Gm28955-201ENSMUST00000188167 Rpgrip1Q9EPQ2 1331 aa13.15□□□□□ -0.3
Gm28955-201ENSMUST00000188167 Ehmt2Q9Z148 1263 aaKnown RBP13.14□□□□□ -0.31
Gm28955-201ENSMUST00000188167 Kdm5dQ62240 1548 aa13.14□□□□□ -0.31
Gm28955-201ENSMUST00000188167 NacadQ5SWP3 1504 aa13.11□□□□□ -0.31
Gm28955-201ENSMUST00000188167 Rb1cc1Q9ESK9 1588 aa13□□□□□ -0.33
Gm28955-201ENSMUST00000188167 Bcl11aQ9QYE3 773 aa12.93□□□□□ -0.34
Gm28955-201ENSMUST00000188167 Aplp2Q06335 707 aa12.88□□□□□ -0.35
Gm28955-201ENSMUST00000188167 Sycp2Q9CUU3 1500 aa12.83□□□□□ -0.36
Gm28955-201ENSMUST00000188167 Baz1aO88379 1555 aa12.82□□□□□ -0.36
Gm28955-201ENSMUST00000188167 CenpbP27790 599 aa12.82□□□□□ -0.36
Gm28955-201ENSMUST00000188167 Pcgf6Q99NA9 353 aa12.82□□□□□ -0.36
Gm28955-201ENSMUST00000188167 Ccdc180J3QNE4 1664 aa12.78□□□□□ -0.36
Gm28955-201ENSMUST00000188167 Rtl1Q7M732 1744 aa12.71□□□□□ -0.38
Gm28955-201ENSMUST00000188167 Crybg2B7ZCC2 1516 aa12.67□□□□□ -0.38
Gm28955-201ENSMUST00000188167 Zcchc6Q5BLK4 1491 aaKnown RBP12.65□□□□□ -0.38
Gm28955-201ENSMUST00000188167 Gtf3c5Q8R2T8 520 aa12.65□□□□□ -0.38
Gm28955-201ENSMUST00000188167 BicraF8VPZ9 1578 aa12.58□□□□□ -0.4
Gm28955-201ENSMUST00000188167 BccipQ9CWI3 316 aa12.57□□□□□ -0.4
Gm28955-201ENSMUST00000188167 PrkcshO08795 521 aa12.54□□□□□ -0.4
Gm28955-201ENSMUST00000188167 Ccdc136Q3TVA9 1136 aa12.51□□□□□ -0.41
Gm28955-201ENSMUST00000188167 Slc4a1apE9PX68 744 aa12.49□□□□□ -0.41
Gm28955-201ENSMUST00000188167 Smarca2Q6DIC0 1577 aa12.49□□□□□ -0.41
Gm28955-201ENSMUST00000188167 Las1lA2BE28 776 aaKnown RBP12.48□□□□□ -0.41
Gm28955-201ENSMUST00000188167 Ncbp3Q8BZR9 615 aaKnown RBP12.47□□□□□ -0.41
Gm28955-201ENSMUST00000188167 TimelessQ9R1X4 1197 aa12.44□□□□□ -0.42
Gm28955-201ENSMUST00000188167 UbtfP25976 765 aaKnown RBP12.43□□□□□ -0.42
Gm28955-201ENSMUST00000188167 Rsph4aQ8BYM7 716 aa12.43□□□□□ -0.42
Gm28955-201ENSMUST00000188167 Q8BT18 775 aa12.42□□□□□ -0.42
Gm28955-201ENSMUST00000188167 Arid3aQ62431 601 aa12.36□□□□□ -0.43
Gm28955-201ENSMUST00000188167 Eif5bQ05D44 1216 aaKnown RBP12.35□□□□□ -0.43
Gm28955-201ENSMUST00000188167 Cecr2E9Q2Z1 1453 aa12.34□□□□□ -0.43
Gm28955-201ENSMUST00000188167 Pknox2Q8BG99 474 aa12.28□□□□□ -0.44
Gm28955-201ENSMUST00000188167 Vsig10D3YX43 558 aa12.26□□□□□ -0.45
Gm28955-201ENSMUST00000188167 4930567H17RikQ3V0K5 233 aa12.26□□□□□ -0.45
Gm28955-201ENSMUST00000188167 Trim41Q5NCC3 630 aa12.26□□□□□ -0.45
Gm28955-201ENSMUST00000188167 HrcG5E8J6 738 aa12.22□□□□□ -0.45
Gm28955-201ENSMUST00000188167 Brd4Q9ESU6 1400 aaKnown RBP12.21□□□□□ -0.45
Gm28955-201ENSMUST00000188167 Dnajc5bQ9CQ94 199 aa12.2□□□□□ -0.46
Gm28955-201ENSMUST00000188167 Cdk11bP24788 784 aaKnown RBP12.19□□□□□ -0.46
Gm28955-201ENSMUST00000188167 Smarca4Q3TKT4 1613 aaKnown RBP12.18□□□□□ -0.46
Gm28955-201ENSMUST00000188167 Taok2Q6ZQ29 1240 aa12.18□□□□□ -0.46
Gm28955-201ENSMUST00000188167 Pds5bQ4VA53 1446 aaKnown RBP12.16□□□□□ -0.46
Gm28955-201ENSMUST00000188167 Znf316Q6PGE4 1016 aa12.13□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Synj1Q8CHC4 1574 aa12.13□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Prdm16A2A935 1275 aa12.13□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Atad2bE9Q166 1460 aaKnown RBP12.13□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Ppargc1bQ8VHJ7 1014 aa12.11□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Acin1Q9JIX8 1338 aaKnown RBP12.11□□□□□ -0.47
Gm28955-201ENSMUST00000188167 CftrP26361 1476 aa12.11□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Hoxd11P23813 323 aa12.09□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Trap1aP19473 224 aa12.09□□□□□ -0.47
Gm28955-201ENSMUST00000188167 Iqgap2Q3UQ44 1575 aa12.07□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Pelp1Q9DBD5 1123 aaKnown RBP12.06□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Esf1Q3V1V3 845 aaKnown RBP12.05□□□□□ -0.48
Gm28955-201ENSMUST00000188167 NrdcQ8BHG1 1161 aa12.05□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Cttnbp2B9EJA2 1648 aa12.05□□□□□ -0.48
Gm28955-201ENSMUST00000188167 1700123L14RikQ3V2K7 440 aa12.04□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Ube2q2Q8K2Z8 378 aa12.04□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Scaf1Q5U4C3 1256 aaKnown RBP12.03□□□□□ -0.48
Gm28955-201ENSMUST00000188167 Gm38655A0A286YDK6 273 aa12.01□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Fgd1P52734 960 aa12□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Cngb1E1AZ71 1325 aa12□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Neurod1Q60867 357 aa11.99□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Znf326O88291 580 aa11.99□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Dnajc5P60904 198 aa11.99□□□□□ -0.49
Gm28955-201ENSMUST00000188167 Dmrt2Q8BG36 561 aa11.96□□□□□ -0.5
Gm28955-201ENSMUST00000188167 Golga3P55937 1487 aa11.93□□□□□ -0.5
Gm28955-201ENSMUST00000188167 Ercc6F8VPZ5 1481 aa11.92□□□□□ -0.5
Gm28955-201ENSMUST00000188167 Frmpd1A2AKB4 1549 aa11.89□□□□□ -0.51
Gm28955-201ENSMUST00000188167 Prdm10Q3UTQ7 1184 aa11.89□□□□□ -0.51
Gm28955-201ENSMUST00000188167 Wdr62Q3U3T8 1523 aa11.89□□□□□ -0.51
Gm28955-201ENSMUST00000188167 Fbxo3Q9DC63 480 aa11.85□□□□□ -0.51
Gm28955-201ENSMUST00000188167 Thoc2B1AZI6 1594 aaKnown RBP11.85□□□□□ -0.51
Gm28955-201ENSMUST00000188167 Top2bQ64511 1612 aa11.81□□□□□ -0.52
Gm28955-201ENSMUST00000188167 Ripply1Q2WG77 201 aa11.81□□□□□ -0.52
Gm28955-201ENSMUST00000188167 Rsf1E9PWW9 1441 aaKnown RBP11.78□□□□□ -0.52
Gm28955-201ENSMUST00000188167 Ccdc88bQ4QRL3 1481 aa11.76□□□□□ -0.53
Gm28955-201ENSMUST00000188167 Fam163aQ8CAA5 168 aa11.76□□□□□ -0.53
Gm28955-201ENSMUST00000188167 NclP09405 707 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms