RNA–Protein interactions for RNA: ENSMUST00000187780.1

Gm28945-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28945, Length 2,165 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28945-201ENSMUST00000187780 Gm35339A0A140LHH9 1649 aa17.12■□□□□ 0.33
Gm28945-201ENSMUST00000187780 NischQ80TM9 1593 aa16.85■□□□□ 0.29
Gm28945-201ENSMUST00000187780 Chic1Q8CBW7 227 aa16.78■□□□□ 0.28
Gm28945-201ENSMUST00000187780 Mapk8ip2Q9ERE9 830 aa16.67■□□□□ 0.26
Gm28945-201ENSMUST00000187780 Abcc8B2RUS7 1588 aa16.35■□□□□ 0.21
Gm28945-201ENSMUST00000187780 Abcc9P70170 1546 aa16.3■□□□□ 0.2
Gm28945-201ENSMUST00000187780 ScribQ80U72 1612 aa15.88■□□□□ 0.13
Gm28945-201ENSMUST00000187780 Rpgrip1Q9EPQ2 1331 aa15.67■□□□□ 0.1
Gm28945-201ENSMUST00000187780 NacadQ5SWP3 1504 aa15.4■□□□□ 0.06
Gm28945-201ENSMUST00000187780 Kdm5dQ62240 1548 aa15.33■□□□□ 0.04
Gm28945-201ENSMUST00000187780 Phf23Q8BSN5 401 aa15.22■□□□□ 0.03
Gm28945-201ENSMUST00000187780 Sycp2Q9CUU3 1500 aa15.1■□□□□ 0.01
Gm28945-201ENSMUST00000187780 Pcgf6Q99NA9 353 aa15.09■□□□□ 0.01
Gm28945-201ENSMUST00000187780 Dcaf1Q80TR8 1506 aa14.96□□□□□ -0.01
Gm28945-201ENSMUST00000187780 Dnajc5bQ9CQ94 199 aa14.91□□□□□ -0.02
Gm28945-201ENSMUST00000187780 BicraF8VPZ9 1578 aa14.91□□□□□ -0.02
Gm28945-201ENSMUST00000187780 Myt1Q8CFC2 1127 aa14.88□□□□□ -0.03
Gm28945-201ENSMUST00000187780 Acin1Q9JIX8 1338 aaKnown RBP14.75□□□□□ -0.05
Gm28945-201ENSMUST00000187780 DiexfQ8BTT6 772 aaKnown RBP14.73□□□□□ -0.05
Gm28945-201ENSMUST00000187780 Rb1cc1Q9ESK9 1588 aa14.66□□□□□ -0.06
Gm28945-201ENSMUST00000187780 Las1lA2BE28 776 aaKnown RBP14.66□□□□□ -0.06
Gm28945-201ENSMUST00000187780 CenpbP27790 599 aa14.62□□□□□ -0.07
Gm28945-201ENSMUST00000187780 Pds5bQ4VA53 1446 aaKnown RBP14.6□□□□□ -0.07
Gm28945-201ENSMUST00000187780 Thoc2B1AZI6 1594 aaKnown RBP14.52□□□□□ -0.09
Gm28945-201ENSMUST00000187780 Baz1aO88379 1555 aa14.43□□□□□ -0.1
Gm28945-201ENSMUST00000187780 Crybg2B7ZCC2 1516 aa14.42□□□□□ -0.1
Gm28945-201ENSMUST00000187780 Rhox8Q6VSS7 320 aa14.41□□□□□ -0.1
Gm28945-201ENSMUST00000187780 Atad2bE9Q166 1460 aaKnown RBP14.4□□□□□ -0.1
Gm28945-201ENSMUST00000187780 Neurod1Q60867 357 aa14.39□□□□□ -0.11
Gm28945-201ENSMUST00000187780 Bcl11aQ9QYE3 773 aa14.35□□□□□ -0.11
Gm28945-201ENSMUST00000187780 Ccdc180J3QNE4 1664 aa14.35□□□□□ -0.11
Gm28945-201ENSMUST00000187780 Plppr3Q7TPB0 716 aa14.34□□□□□ -0.11
Gm28945-201ENSMUST00000187780 Gab3Q8BSM5 595 aa14.34□□□□□ -0.11
Gm28945-201ENSMUST00000187780 Zcchc6Q5BLK4 1491 aaKnown RBP14.31□□□□□ -0.12
Gm28945-201ENSMUST00000187780 Cc2d2aQ8CFW7 1633 aa14.3□□□□□ -0.12
Gm28945-201ENSMUST00000187780 Ercc6F8VPZ5 1481 aa14.29□□□□□ -0.12
Gm28945-201ENSMUST00000187780 1700123L14RikQ3V2K7 440 aa14.29□□□□□ -0.12
Gm28945-201ENSMUST00000187780 Rtl1Q7M732 1744 aa14.25□□□□□ -0.13
Gm28945-201ENSMUST00000187780 Trim41Q5NCC3 630 aa14.23□□□□□ -0.13
Gm28945-201ENSMUST00000187780 Smarca2Q6DIC0 1577 aa14.19□□□□□ -0.14
Gm28945-201ENSMUST00000187780 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
Gm28945-201ENSMUST00000187780 Fam135aQ6NS59 1506 aa14.15□□□□□ -0.14
Gm28945-201ENSMUST00000187780 Iqgap2Q3UQ44 1575 aa14.12□□□□□ -0.15
Gm28945-201ENSMUST00000187780 Supt5hO55201 1082 aaKnown RBP14.12□□□□□ -0.15
Gm28945-201ENSMUST00000187780 Amer1Q7TS75 1132 aa14.08□□□□□ -0.16
Gm28945-201ENSMUST00000187780 Cecr2E9Q2Z1 1453 aa14.05□□□□□ -0.16
Gm28945-201ENSMUST00000187780 Phldb1Q6PDH0 1371 aaKnown RBP14.04□□□□□ -0.16
Gm28945-201ENSMUST00000187780 Wdr62Q3U3T8 1523 aa14.04□□□□□ -0.16
Gm28945-201ENSMUST00000187780 Frmpd1A2AKB4 1549 aa14.03□□□□□ -0.16
Gm28945-201ENSMUST00000187780 Baz1bQ9Z277 1479 aa14□□□□□ -0.17
Gm28945-201ENSMUST00000187780 Aplp2Q06335 707 aa13.97□□□□□ -0.17
Gm28945-201ENSMUST00000187780 Ubl4bQ9CQ84 188 aa13.96□□□□□ -0.17
Gm28945-201ENSMUST00000187780 Anks4bQ8K3X6 423 aa13.96□□□□□ -0.18
Gm28945-201ENSMUST00000187780 PrkcshO08795 521 aa13.95□□□□□ -0.18
Gm28945-201ENSMUST00000187780 Csrnp3P59055 597 aa13.92□□□□□ -0.18
Gm28945-201ENSMUST00000187780 Mrc2Q64449 1479 aa13.85□□□□□ -0.19
Gm28945-201ENSMUST00000187780 Senp3Q9EP97 568 aaKnown RBP13.81□□□□□ -0.2
Gm28945-201ENSMUST00000187780 Ube2uB1AUC4 352 aa13.77□□□□□ -0.21
Gm28945-201ENSMUST00000187780 Dnajc5P60904 198 aa13.77□□□□□ -0.21
Gm28945-201ENSMUST00000187780 Unc13aQ4KUS2 1712 aa13.77□□□□□ -0.21
Gm28945-201ENSMUST00000187780 Ehmt2Q9Z148 1263 aaKnown RBP13.71□□□□□ -0.21
Gm28945-201ENSMUST00000187780 CftrP26361 1476 aa13.69□□□□□ -0.22
Gm28945-201ENSMUST00000187780 Cngb1E1AZ71 1325 aa13.68□□□□□ -0.22
Gm28945-201ENSMUST00000187780 Cttnbp2B9EJA2 1648 aa13.67□□□□□ -0.22
Gm28945-201ENSMUST00000187780 Synj1Q8CHC4 1574 aa13.62□□□□□ -0.23
Gm28945-201ENSMUST00000187780 Brd4Q9ESU6 1400 aaKnown RBP13.61□□□□□ -0.23
Gm28945-201ENSMUST00000187780 Lrriq1Q0P5X1 1673 aa13.53□□□□□ -0.24
Gm28945-201ENSMUST00000187780 Esf1Q3V1V3 845 aaKnown RBP13.53□□□□□ -0.24
Gm28945-201ENSMUST00000187780 Cux2P70298 1426 aa13.52□□□□□ -0.24
Gm28945-201ENSMUST00000187780 Ccdc136Q3TVA9 1136 aa13.52□□□□□ -0.25
Gm28945-201ENSMUST00000187780 Ifnlr1Q8CGK5 535 aa13.51□□□□□ -0.25
Gm28945-201ENSMUST00000187780 Rsf1E9PWW9 1441 aaKnown RBP13.51□□□□□ -0.25
Gm28945-201ENSMUST00000187780 Kif15Q6P9L6 1387 aa13.48□□□□□ -0.25
Gm28945-201ENSMUST00000187780 Kif21aQ9QXL2 1672 aa13.43□□□□□ -0.26
Gm28945-201ENSMUST00000187780 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Gm28945-201ENSMUST00000187780 Fam71e1A1L3C1 212 aa13.39□□□□□ -0.27
Gm28945-201ENSMUST00000187780 CatipB9EKE5 520 aa13.38□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Sall2Q9QX96 1004 aa13.38□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Fgd1P52734 960 aa13.35□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Eif4g3Q80XI3 1579 aaKnown RBP13.34□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Pknox2Q8BG99 474 aa13.34□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Lamc3Q9R0B6 1581 aa13.34□□□□□ -0.27
Gm28945-201ENSMUST00000187780 Shroom2A2ALU4 1481 aa13.33□□□□□ -0.28
Gm28945-201ENSMUST00000187780 Cep164Q5DU05 1446 aa13.32□□□□□ -0.28
Gm28945-201ENSMUST00000187780 NrdcQ8BHG1 1161 aa13.31□□□□□ -0.28
Gm28945-201ENSMUST00000187780 Gm38655A0A286YDK6 273 aa13.3□□□□□ -0.28
Gm28945-201ENSMUST00000187780 Cdk11bP24788 784 aaKnown RBP13.28□□□□□ -0.28
Gm28945-201ENSMUST00000187780 Zeb1Q64318 1117 aa13.28□□□□□ -0.28
Gm28945-201ENSMUST00000187780 Hdac5Q9Z2V6 1113 aa13.28□□□□□ -0.28
Gm28945-201ENSMUST00000187780 HrcG5E8J6 738 aa13.25□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Rtl5Q5DTT4 599 aa13.25□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Urb2E9Q7L1 1524 aaKnown RBP13.24□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Ttbk1Q6PCN3 1308 aa13.23□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Dhx29Q6PGC1 1365 aaKnown RBP13.22□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Pabpn1Q8CCS6 302 aaKnown RBP13.22□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Il27Q8K3I6 234 aa13.22□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Plb1Q3TTY0 1478 aa13.21□□□□□ -0.29
Gm28945-201ENSMUST00000187780 Col17a1Q07563 1470 aa13.2□□□□□ -0.3
Gm28945-201ENSMUST00000187780 NefmP08553 848 aa13.2□□□□□ -0.3
Gm28945-201ENSMUST00000187780 Ccdc18Q640L5 1455 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms