RNA–Protein interactions for RNA: ENSMUST00000187560.1

Gm28240-201, mousemouse

BASIC

Gene Gm28240, Length 2,053 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28240-201ENSMUST00000187560 Chic1Q8CBW7 227 aa22.13■■□□□ 1.13
Gm28240-201ENSMUST00000187560 Mapk8ip2Q9ERE9 830 aa20.5■□□□□ 0.87
Gm28240-201ENSMUST00000187560 Plppr3Q7TPB0 716 aa20.15■□□□□ 0.82
Gm28240-201ENSMUST00000187560 Phf23Q8BSN5 401 aa20.09■□□□□ 0.81
Gm28240-201ENSMUST00000187560 Gab3Q8BSM5 595 aa19.49■□□□□ 0.71
Gm28240-201ENSMUST00000187560 Kcna4Q61423 654 aa19.19■□□□□ 0.66
Gm28240-201ENSMUST00000187560 Senp3Q9EP97 568 aaKnown RBP18.78■□□□□ 0.6
Gm28240-201ENSMUST00000187560 Ube2uB1AUC4 352 aa17.79■□□□□ 0.44
Gm28240-201ENSMUST00000187560 Ppargc1bQ8VHJ7 1014 aa17.75■□□□□ 0.43
Gm28240-201ENSMUST00000187560 Dmrt2Q8BG36 561 aa17.18■□□□□ 0.34
Gm28240-201ENSMUST00000187560 Slc4a1apE9PX68 744 aa16.92■□□□□ 0.3
Gm28240-201ENSMUST00000187560 Trap1aP19473 224 aa16.56■□□□□ 0.24
Gm28240-201ENSMUST00000187560 Fam71e1A1L3C1 212 aa16.43■□□□□ 0.22
Gm28240-201ENSMUST00000187560 Ehmt2Q9Z148 1263 aaKnown RBP16.22■□□□□ 0.19
Gm28240-201ENSMUST00000187560 Hoxd11P23813 323 aa16.18■□□□□ 0.18
Gm28240-201ENSMUST00000187560 Atf5O70191 283 aa16.01■□□□□ 0.15
Gm28240-201ENSMUST00000187560 1700123L14RikQ3V2K7 440 aa15.81■□□□□ 0.12
Gm28240-201ENSMUST00000187560 Ppp4r2Q0VGB7 417 aa15.79■□□□□ 0.12
Gm28240-201ENSMUST00000187560 AcrbpQ3V140 540 aa15.78■□□□□ 0.12
Gm28240-201ENSMUST00000187560 Nlrp6Q91WS2 869 aa15.75■□□□□ 0.11
Gm28240-201ENSMUST00000187560 Pde4cQ3UEI1 686 aa15.73■□□□□ 0.11
Gm28240-201ENSMUST00000187560 Dnajc5bQ9CQ94 199 aa15.72■□□□□ 0.11
Gm28240-201ENSMUST00000187560 Hs6st3Q9QYK4 470 aa15.71■□□□□ 0.1
Gm28240-201ENSMUST00000187560 Cdca7Q9D0M2 382 aa15.55■□□□□ 0.08
Gm28240-201ENSMUST00000187560 Chrna2Q91X60 512 aa15.53■□□□□ 0.08
Gm28240-201ENSMUST00000187560 Rtn4Q99P72 1162 aaKnown RBP15.52■□□□□ 0.07
Gm28240-201ENSMUST00000187560 Tshz2Q68FE9 1030 aa15.38■□□□□ 0.05
Gm28240-201ENSMUST00000187560 Rsph4aQ8BYM7 716 aa15.33■□□□□ 0.04
Gm28240-201ENSMUST00000187560 Znf219Q6IQX8 726 aa15.32■□□□□ 0.04
Gm28240-201ENSMUST00000187560 Prm3Q62100 101 aa15.27■□□□□ 0.03
Gm28240-201ENSMUST00000187560 Prdm10Q3UTQ7 1184 aa15.19■□□□□ 0.02
Gm28240-201ENSMUST00000187560 Ecm2Q5FW85 670 aa15.13■□□□□ 0.01
Gm28240-201ENSMUST00000187560 Rimbp2Q80U40 1072 aa15.12■□□□□ 0.01
Gm28240-201ENSMUST00000187560 Npm2Q80W85 207 aa14.94□□□□□ -0.02
Gm28240-201ENSMUST00000187560 Riok3Q9DBU3 519 aaKnown RBP14.89□□□□□ -0.03
Gm28240-201ENSMUST00000187560 Styxl1Q9DAR2 321 aa14.89□□□□□ -0.03
Gm28240-201ENSMUST00000187560 MyclP10166 368 aa14.87□□□□□ -0.03
Gm28240-201ENSMUST00000187560 C1qtnf12Q8R2Z0 308 aa14.87□□□□□ -0.03
Gm28240-201ENSMUST00000187560 Bach1P97302 739 aa14.85□□□□□ -0.03
Gm28240-201ENSMUST00000187560 Fam163aQ8CAA5 168 aa14.78□□□□□ -0.04
Gm28240-201ENSMUST00000187560 WdpcpQ8C456 722 aa14.59□□□□□ -0.07
Gm28240-201ENSMUST00000187560 Prdm16A2A935 1275 aa14.56□□□□□ -0.08
Gm28240-201ENSMUST00000187560 Taok2Q6ZQ29 1240 aa14.53□□□□□ -0.08
Gm28240-201ENSMUST00000187560 ArsiQ32KI9 573 aa14.51□□□□□ -0.09
Gm28240-201ENSMUST00000187560 Arid3aQ62431 601 aa14.5□□□□□ -0.09
Gm28240-201ENSMUST00000187560 CatipB9EKE5 520 aa14.5□□□□□ -0.09
Gm28240-201ENSMUST00000187560 Slc34a2Q9DBP0 697 aa14.46□□□□□ -0.09
Gm28240-201ENSMUST00000187560 Ms4a5Q810P8 197 aa14.43□□□□□ -0.1
Gm28240-201ENSMUST00000187560 Akt1s1Q9D1F4 257 aa14.43□□□□□ -0.1
Gm28240-201ENSMUST00000187560 Trim41Q5NCC3 630 aa14.43□□□□□ -0.1
Gm28240-201ENSMUST00000187560 Sox12Q04890 314 aa14.4□□□□□ -0.1
Gm28240-201ENSMUST00000187560 Tcf3P15806 651 aa14.28□□□□□ -0.12
Gm28240-201ENSMUST00000187560 G430095P16RikE9Q913 147 aa13.95□□□□□ -0.18
Gm28240-201ENSMUST00000187560 MpndQ3TV65 487 aa13.87□□□□□ -0.19
Gm28240-201ENSMUST00000187560 Ppp1r37Q8BKR5 712 aa13.85□□□□□ -0.19
Gm28240-201ENSMUST00000187560 Ppp6r1Q7TSI3 856 aa13.84□□□□□ -0.19
Gm28240-201ENSMUST00000187560 Skap1Q3UUV5 355 aa13.84□□□□□ -0.19
Gm28240-201ENSMUST00000187560 Ifnlr1Q8CGK5 535 aa13.8□□□□□ -0.2
Gm28240-201ENSMUST00000187560 Npm3Q9CPP0 175 aaKnown RBP13.71□□□□□ -0.21
Gm28240-201ENSMUST00000187560 Fbln2P37889 1221 aa13.71□□□□□ -0.21
Gm28240-201ENSMUST00000187560 Vsig10D3YX43 558 aa13.7□□□□□ -0.22
Gm28240-201ENSMUST00000187560 Esf1Q3V1V3 845 aaKnown RBP13.69□□□□□ -0.22
Gm28240-201ENSMUST00000187560 Spock2Q9ER58 423 aa13.64□□□□□ -0.23
Gm28240-201ENSMUST00000187560 Zbtb22Q9Z0G7 638 aa13.6□□□□□ -0.23
Gm28240-201ENSMUST00000187560 Zbtb12Q9Z150 459 aa13.57□□□□□ -0.24
Gm28240-201ENSMUST00000187560 Zbtb7aO88939 569 aaKnown RBP13.56□□□□□ -0.24
Gm28240-201ENSMUST00000187560 Mkrn3Q60764 544 aa13.54□□□□□ -0.24
Gm28240-201ENSMUST00000187560 Slc4a2P13808 1237 aaKnown RBP13.49□□□□□ -0.25
Gm28240-201ENSMUST00000187560 Egfem1Q8C088 590 aa13.46□□□□□ -0.25
Gm28240-201ENSMUST00000187560 Zeb1Q64318 1117 aa13.45□□□□□ -0.26
Gm28240-201ENSMUST00000187560 Slc24a1Q91WD8 1130 aa13.44□□□□□ -0.26
Gm28240-201ENSMUST00000187560 Gtpbp6Q3U6U5 514 aa13.44□□□□□ -0.26
Gm28240-201ENSMUST00000187560 Skida1Q80YR3 822 aa13.43□□□□□ -0.26
Gm28240-201ENSMUST00000187560 Rnf216P58283 853 aa13.4□□□□□ -0.27
Gm28240-201ENSMUST00000187560 MycnP03966 462 aaKnown RBP13.38□□□□□ -0.27
Gm28240-201ENSMUST00000187560 Ferd3lQ923Z4 168 aa13.38□□□□□ -0.27
Gm28240-201ENSMUST00000187560 Ubap1lG3UW59 384 aa13.33□□□□□ -0.28
Gm28240-201ENSMUST00000187560 TimelessQ9R1X4 1197 aa13.33□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Grwd1Q810D6 446 aaKnown RBP13.31□□□□□ -0.28
Gm28240-201ENSMUST00000187560 ArxO35085 564 aa13.3□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Lrrc43Q3V0L5 667 aa13.3□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Abcb7Q61102 752 aaKnown RBP13.3□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Spryd3E9Q9B3 442 aa13.28□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Noa1Q9JJG9 693 aaKnown RBP13.28□□□□□ -0.28
Gm28240-201ENSMUST00000187560 Jarid2Q62315 1234 aa13.22□□□□□ -0.29
Gm28240-201ENSMUST00000187560 P3h3Q8CG70 732 aa13.2□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Dnajc5P60904 198 aa13.19□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Zbtb38Q3LR78 1197 aa13.19□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Rgl2Q61193 778 aa13.19□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Stag3O70576 1240 aa13.17□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Tmem132aQ922P8 1018 aa13.17□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Fam117bQ3U3E2 584 aa13.16□□□□□ -0.3
Gm28240-201ENSMUST00000187560 Nkx1-1G3UXB3 402 aa13.12□□□□□ -0.31
Gm28240-201ENSMUST00000187560 Hdac5Q9Z2V6 1113 aa13.11□□□□□ -0.31
Gm28240-201ENSMUST00000187560 Repin1Q5U4E2 545 aa13.1□□□□□ -0.31
Gm28240-201ENSMUST00000187560 Rsph6aQ8CDR2 708 aa13.09□□□□□ -0.31
Gm28240-201ENSMUST00000187560 UncxO08934 530 aa13.07□□□□□ -0.32
Gm28240-201ENSMUST00000187560 Pde4dQ01063 747 aa13.06□□□□□ -0.32
Gm28240-201ENSMUST00000187560 Map4k4P97820 1233 aaKnown RBP13.03□□□□□ -0.32
Gm28240-201ENSMUST00000187560 Ripply1Q2WG77 201 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms