RNA–Protein interactions for RNA: ENSMUST00000165679.7

Rnf43-209, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Rnf43, Length 4,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-209ENSMUST00000165679 Rhox8Q6VSS7 320 aa14.52□□□□□ -0.09
Rnf43-209ENSMUST00000165679 NischQ80TM9 1593 aa14.09□□□□□ -0.15
Rnf43-209ENSMUST00000165679 Rpgrip1Q9EPQ2 1331 aa14.06□□□□□ -0.16
Rnf43-209ENSMUST00000165679 Ehmt2Q9Z148 1263 aaKnown RBP13.75□□□□□ -0.21
Rnf43-209ENSMUST00000165679 Abcc9P70170 1546 aa13.32□□□□□ -0.28
Rnf43-209ENSMUST00000165679 Las1lA2BE28 776 aaKnown RBP13.31□□□□□ -0.28
Rnf43-209ENSMUST00000165679 Ccdc136Q3TVA9 1136 aa13.28□□□□□ -0.28
Rnf43-209ENSMUST00000165679 Abcc8B2RUS7 1588 aa13.16□□□□□ -0.3
Rnf43-209ENSMUST00000165679 Acin1Q9JIX8 1338 aaKnown RBP13.14□□□□□ -0.31
Rnf43-209ENSMUST00000165679 Zeb1Q64318 1117 aa13.09□□□□□ -0.31
Rnf43-209ENSMUST00000165679 Pcgf6Q99NA9 353 aa13.02□□□□□ -0.32
Rnf43-209ENSMUST00000165679 Cngb1E1AZ71 1325 aa13.01□□□□□ -0.33
Rnf43-209ENSMUST00000165679 Gm35339A0A140LHH9 1649 aa12.96□□□□□ -0.33
Rnf43-209ENSMUST00000165679 Wdr66E9Q743 1299 aa12.92□□□□□ -0.34
Rnf43-209ENSMUST00000165679 Esf1Q3V1V3 845 aaKnown RBP12.85□□□□□ -0.35
Rnf43-209ENSMUST00000165679 Ccdc180J3QNE4 1664 aa12.78□□□□□ -0.36
Rnf43-209ENSMUST00000165679 CenpbP27790 599 aa12.75□□□□□ -0.37
Rnf43-209ENSMUST00000165679 Trim41Q5NCC3 630 aa12.73□□□□□ -0.37
Rnf43-209ENSMUST00000165679 Supt5hO55201 1082 aaKnown RBP12.7□□□□□ -0.38
Rnf43-209ENSMUST00000165679 Gab3Q8BSM5 595 aa12.68□□□□□ -0.38
Rnf43-209ENSMUST00000165679 Rtl1Q7M732 1744 aa12.66□□□□□ -0.38
Rnf43-209ENSMUST00000165679 Zcchc6Q5BLK4 1491 aaKnown RBP12.65□□□□□ -0.38
Rnf43-209ENSMUST00000165679 NefmP08553 848 aa12.61□□□□□ -0.39
Rnf43-209ENSMUST00000165679 Myt1Q8CFC2 1127 aa12.61□□□□□ -0.39
Rnf43-209ENSMUST00000165679 HrcG5E8J6 738 aa12.58□□□□□ -0.4
Rnf43-209ENSMUST00000165679 Pelp1Q9DBD5 1123 aaKnown RBP12.57□□□□□ -0.4
Rnf43-209ENSMUST00000165679 Neurod1Q60867 357 aa12.51□□□□□ -0.41
Rnf43-209ENSMUST00000165679 DiexfQ8BTT6 772 aaKnown RBP12.47□□□□□ -0.41
Rnf43-209ENSMUST00000165679 Ppargc1bQ8VHJ7 1014 aa12.46□□□□□ -0.42
Rnf43-209ENSMUST00000165679 Amer1Q7TS75 1132 aa12.45□□□□□ -0.42
Rnf43-209ENSMUST00000165679 Cdk11bP24788 784 aaKnown RBP12.41□□□□□ -0.42
Rnf43-209ENSMUST00000165679 Ttbk1Q6PCN3 1308 aa12.39□□□□□ -0.43
Rnf43-209ENSMUST00000165679 Myt1lP97500 1187 aa12.38□□□□□ -0.43
Rnf43-209ENSMUST00000165679 Npm2Q80W85 207 aa12.36□□□□□ -0.43
Rnf43-209ENSMUST00000165679 Gm38655A0A286YDK6 273 aa12.35□□□□□ -0.43
Rnf43-209ENSMUST00000165679 Rb1cc1Q9ESK9 1588 aa12.35□□□□□ -0.43
Rnf43-209ENSMUST00000165679 Il27Q8K3I6 234 aa12.32□□□□□ -0.44
Rnf43-209ENSMUST00000165679 Nop58Q6DFW4 536 aaKnown RBP12.31□□□□□ -0.44
Rnf43-209ENSMUST00000165679 Csrnp3P59055 597 aa12.31□□□□□ -0.44
Rnf43-209ENSMUST00000165679 UbtfP25976 765 aaKnown RBP12.26□□□□□ -0.45
Rnf43-209ENSMUST00000165679 NacadQ5SWP3 1504 aa12.25□□□□□ -0.45
Rnf43-209ENSMUST00000165679 Kdm5dQ62240 1548 aa12.22□□□□□ -0.45
Rnf43-209ENSMUST00000165679 Stra8P70278 393 aa12.19□□□□□ -0.46
Rnf43-209ENSMUST00000165679 Slc24a1Q91WD8 1130 aa12.19□□□□□ -0.46
Rnf43-209ENSMUST00000165679 1700123L14RikQ3V2K7 440 aa12.15□□□□□ -0.46
Rnf43-209ENSMUST00000165679 Dcaf1Q80TR8 1506 aa12.14□□□□□ -0.47
Rnf43-209ENSMUST00000165679 Tnnt3Q9QZ47 272 aa12.14□□□□□ -0.47
Rnf43-209ENSMUST00000165679 ScribQ80U72 1612 aa12.12□□□□□ -0.47
Rnf43-209ENSMUST00000165679 Sall2Q9QX96 1004 aa12.12□□□□□ -0.47
Rnf43-209ENSMUST00000165679 Anks4bQ8K3X6 423 aa12.1□□□□□ -0.47
Rnf43-209ENSMUST00000165679 Baz1aO88379 1555 aa12.06□□□□□ -0.48
Rnf43-209ENSMUST00000165679 Mier1Q5UAK0 511 aa12.06□□□□□ -0.48
Rnf43-209ENSMUST00000165679 Ube2uB1AUC4 352 aa12.04□□□□□ -0.48
Rnf43-209ENSMUST00000165679 Chic1Q8CBW7 227 aa12.03□□□□□ -0.48
Rnf43-209ENSMUST00000165679 Aplp2Q06335 707 aa12.01□□□□□ -0.49
Rnf43-209ENSMUST00000165679 ClspnQ80YR7 1315 aa11.97□□□□□ -0.49
Rnf43-209ENSMUST00000165679 4933416C03RikQ3V063 378 aa11.97□□□□□ -0.49
Rnf43-209ENSMUST00000165679 Brd4Q9ESU6 1400 aaKnown RBP11.96□□□□□ -0.49
Rnf43-209ENSMUST00000165679 Rtl5Q5DTT4 599 aa11.96□□□□□ -0.49
Rnf43-209ENSMUST00000165679 Ap3b1Q9Z1T1 1105 aa11.96□□□□□ -0.5
Rnf43-209ENSMUST00000165679 TonslQ6NZL6 1363 aa11.95□□□□□ -0.5
Rnf43-209ENSMUST00000165679 Mapk8ip2Q9ERE9 830 aa11.9□□□□□ -0.5
Rnf43-209ENSMUST00000165679 Eif5bQ05D44 1216 aaKnown RBP11.9□□□□□ -0.5
Rnf43-209ENSMUST00000165679 Bcl11aQ9QYE3 773 aa11.89□□□□□ -0.51
Rnf43-209ENSMUST00000165679 Sycp2Q9CUU3 1500 aa11.86□□□□□ -0.51
Rnf43-209ENSMUST00000165679 Npm1Q61937 292 aaKnown RBP11.85□□□□□ -0.51
Rnf43-209ENSMUST00000165679 Anp32aO35381 247 aa11.84□□□□□ -0.51
Rnf43-209ENSMUST00000165679 Fam71e1A1L3C1 212 aa11.81□□□□□ -0.52
Rnf43-209ENSMUST00000165679 Ubl4bQ9CQ84 188 aa11.8□□□□□ -0.52
Rnf43-209ENSMUST00000165679 NclP09405 707 aaKnown RBP11.78□□□□□ -0.52
Rnf43-209ENSMUST00000165679 Cep164Q5DU05 1446 aa11.77□□□□□ -0.53
Rnf43-209ENSMUST00000165679 Cecr2E9Q2Z1 1453 aa11.74□□□□□ -0.53
Rnf43-209ENSMUST00000165679 Plekhg3Q4VAC9 1341 aa11.72□□□□□ -0.53
Rnf43-209ENSMUST00000165679 NrdcQ8BHG1 1161 aa11.71□□□□□ -0.53
Rnf43-209ENSMUST00000165679 Lmod2Q3UHZ5 550 aa11.69□□□□□ -0.54
Rnf43-209ENSMUST00000165679 Aebp2Q9Z248 504 aaKnown RBP11.68□□□□□ -0.54
Rnf43-209ENSMUST00000165679 DaxxO35613 739 aa11.68□□□□□ -0.54
Rnf43-209ENSMUST00000165679 Fam50aQ9WV03 339 aaKnown RBP11.66□□□□□ -0.54
Rnf43-209ENSMUST00000165679 Golga3P55937 1487 aa11.66□□□□□ -0.54
Rnf43-209ENSMUST00000165679 Rsf1E9PWW9 1441 aaKnown RBP11.64□□□□□ -0.55
Rnf43-209ENSMUST00000165679 SafbD3YXK2 937 aaKnown RBP11.63□□□□□ -0.55
Rnf43-209ENSMUST00000165679 Kif15Q6P9L6 1387 aa11.61□□□□□ -0.55
Rnf43-209ENSMUST00000165679 Eid3Q3V124 375 aa11.6□□□□□ -0.55
Rnf43-209ENSMUST00000165679 Smarca2Q6DIC0 1577 aa11.59□□□□□ -0.55
Rnf43-209ENSMUST00000165679 NeflP08551 543 aa11.59□□□□□ -0.55
Rnf43-209ENSMUST00000165679 Crybg2B7ZCC2 1516 aa11.58□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Ccdc88bQ4QRL3 1481 aa11.57□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Ppp4r2Q0VGB7 417 aa11.56□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Calr4Q3TQS0 420 aa11.54□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Pds5bQ4VA53 1446 aaKnown RBP11.54□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Ercc6F8VPZ5 1481 aa11.54□□□□□ -0.56
Rnf43-209ENSMUST00000165679 PrkcshO08795 521 aa11.53□□□□□ -0.56
Rnf43-209ENSMUST00000165679 CftrP26361 1476 aa11.53□□□□□ -0.56
Rnf43-209ENSMUST00000165679 Hnrnpul2Q00PI9 745 aaKnown RBP11.52□□□□□ -0.57
Rnf43-209ENSMUST00000165679 Ifnlr1Q8CGK5 535 aa11.51□□□□□ -0.57
Rnf43-209ENSMUST00000165679 Fkbp15Q6P9Q6 1216 aaKnown RBP11.51□□□□□ -0.57
Rnf43-209ENSMUST00000165679 Anp32bQ9EST5 272 aaKnown RBP11.51□□□□□ -0.57
Rnf43-209ENSMUST00000165679 Clip1Q922J3 1391 aa11.51□□□□□ -0.57
Rnf43-209ENSMUST00000165679 Synj1Q8CHC4 1574 aa11.5□□□□□ -0.57
Rnf43-209ENSMUST00000165679 4930567H17RikQ3V0K5 233 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 316.7 ms