RNA–Protein interactions for RNA: ENSMUST00000164384.8

Scn9a-206, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-206ENSMUST00000164384 Rpgrip1Q9EPQ2 1331 aa8.98□□□□□ -0.97
Scn9a-206ENSMUST00000164384 Rhox8Q6VSS7 320 aa8.94□□□□□ -0.98
Scn9a-206ENSMUST00000164384 Las1lA2BE28 776 aaKnown RBP8.88□□□□□ -0.99
Scn9a-206ENSMUST00000164384 Cngb1E1AZ71 1325 aa8.8□□□□□ -1
Scn9a-206ENSMUST00000164384 Pelp1Q9DBD5 1123 aaKnown RBP8.57□□□□□ -1.04
Scn9a-206ENSMUST00000164384 Amer1Q7TS75 1132 aa8.43□□□□□ -1.06
Scn9a-206ENSMUST00000164384 Myt1Q8CFC2 1127 aa8.42□□□□□ -1.06
Scn9a-206ENSMUST00000164384 CenpbP27790 599 aa8.38□□□□□ -1.07
Scn9a-206ENSMUST00000164384 Ehmt2Q9Z148 1263 aaKnown RBP8.27□□□□□ -1.09
Scn9a-206ENSMUST00000164384 Wdr66E9Q743 1299 aa8.2□□□□□ -1.1
Scn9a-206ENSMUST00000164384 DiexfQ8BTT6 772 aaKnown RBP8.17□□□□□ -1.1
Scn9a-206ENSMUST00000164384 Zeb1Q64318 1117 aa8.14□□□□□ -1.11
Scn9a-206ENSMUST00000164384 4930567H17RikQ3V0K5 233 aa8.13□□□□□ -1.11
Scn9a-206ENSMUST00000164384 Esf1Q3V1V3 845 aaKnown RBP8.11□□□□□ -1.11
Scn9a-206ENSMUST00000164384 Acin1Q9JIX8 1338 aaKnown RBP8.03□□□□□ -1.12
Scn9a-206ENSMUST00000164384 Ube2uB1AUC4 352 aa8□□□□□ -1.13
Scn9a-206ENSMUST00000164384 Ttbk1Q6PCN3 1308 aa8□□□□□ -1.13
Scn9a-206ENSMUST00000164384 Pcgf6Q99NA9 353 aa7.97□□□□□ -1.13
Scn9a-206ENSMUST00000164384 4933416C03RikQ3V063 378 aa7.92□□□□□ -1.14
Scn9a-206ENSMUST00000164384 Stra8P70278 393 aa7.91□□□□□ -1.14
Scn9a-206ENSMUST00000164384 Ccdc136Q3TVA9 1136 aa7.9□□□□□ -1.14
Scn9a-206ENSMUST00000164384 Rtl5Q5DTT4 599 aa7.89□□□□□ -1.15
Scn9a-206ENSMUST00000164384 Cdk11bP24788 784 aaKnown RBP7.88□□□□□ -1.15
Scn9a-206ENSMUST00000164384 NefmP08553 848 aa7.87□□□□□ -1.15
Scn9a-206ENSMUST00000164384 Npm2Q80W85 207 aa7.86□□□□□ -1.15
Scn9a-206ENSMUST00000164384 Tnnt3Q9QZ47 272 aa7.82□□□□□ -1.16
Scn9a-206ENSMUST00000164384 Trim41Q5NCC3 630 aa7.77□□□□□ -1.17
Scn9a-206ENSMUST00000164384 NischQ80TM9 1593 aa7.75□□□□□ -1.17
Scn9a-206ENSMUST00000164384 Nop58Q6DFW4 536 aaKnown RBP7.74□□□□□ -1.17
Scn9a-206ENSMUST00000164384 Gab3Q8BSM5 595 aa7.71□□□□□ -1.18
Scn9a-206ENSMUST00000164384 Myt1lP97500 1187 aa7.68□□□□□ -1.18
Scn9a-206ENSMUST00000164384 HrcG5E8J6 738 aa7.67□□□□□ -1.18
Scn9a-206ENSMUST00000164384 Slc24a1Q91WD8 1130 aa7.67□□□□□ -1.18
Scn9a-206ENSMUST00000164384 Supt5hO55201 1082 aaKnown RBP7.67□□□□□ -1.18
Scn9a-206ENSMUST00000164384 Ythdc1E9Q5K9 736 aaKnown RBP7.65□□□□□ -1.18
Scn9a-206ENSMUST00000164384 Il27Q8K3I6 234 aa7.6□□□□□ -1.19
Scn9a-206ENSMUST00000164384 Anp32aO35381 247 aa7.6□□□□□ -1.19
Scn9a-206ENSMUST00000164384 DaxxO35613 739 aa7.59□□□□□ -1.19
Scn9a-206ENSMUST00000164384 Aplp2Q06335 707 aa7.57□□□□□ -1.2
Scn9a-206ENSMUST00000164384 Neurod1Q60867 357 aa7.57□□□□□ -1.2
Scn9a-206ENSMUST00000164384 NeflP08551 543 aa7.56□□□□□ -1.2
Scn9a-206ENSMUST00000164384 Abcc9P70170 1546 aa7.53□□□□□ -1.2
Scn9a-206ENSMUST00000164384 Ccdc9Q8VC31 543 aaKnown RBP7.53□□□□□ -1.2
Scn9a-206ENSMUST00000164384 Anks4bQ8K3X6 423 aa7.52□□□□□ -1.2
Scn9a-206ENSMUST00000164384 NrdcQ8BHG1 1161 aa7.52□□□□□ -1.21
Scn9a-206ENSMUST00000164384 UbtfP25976 765 aaKnown RBP7.51□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Bcl11aQ9QYE3 773 aa7.51□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Plppr3Q7TPB0 716 aa7.5□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Csrnp3P59055 597 aa7.5□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Gm13697A2AK42 830 aa7.5□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Eif5bQ05D44 1216 aaKnown RBP7.49□□□□□ -1.21
Scn9a-206ENSMUST00000164384 Ifnlr1Q8CGK5 535 aa7.46□□□□□ -1.22
Scn9a-206ENSMUST00000164384 Os9Q8K2C7 672 aa7.46□□□□□ -1.22
Scn9a-206ENSMUST00000164384 Gm35339A0A140LHH9 1649 aa7.44□□□□□ -1.22
Scn9a-206ENSMUST00000164384 Ppargc1bQ8VHJ7 1014 aa7.43□□□□□ -1.22
Scn9a-206ENSMUST00000164384 Anp32bQ9EST5 272 aaKnown RBP7.42□□□□□ -1.22
Scn9a-206ENSMUST00000164384 Gm38655A0A286YDK6 273 aa7.42□□□□□ -1.22
Scn9a-206ENSMUST00000164384 1700123L14RikQ3V2K7 440 aa7.39□□□□□ -1.23
Scn9a-206ENSMUST00000164384 Abcc8B2RUS7 1588 aa7.37□□□□□ -1.23
Scn9a-206ENSMUST00000164384 Hsp90aa1P07901 733 aaKnown RBP7.37□□□□□ -1.23
Scn9a-206ENSMUST00000164384 ClspnQ80YR7 1315 aa7.37□□□□□ -1.23
Scn9a-206ENSMUST00000164384 NclP09405 707 aaKnown RBP7.36□□□□□ -1.23
Scn9a-206ENSMUST00000164384 Zcchc6Q5BLK4 1491 aaKnown RBP7.36□□□□□ -1.23
Scn9a-206ENSMUST00000164384 TonslQ6NZL6 1363 aa7.35□□□□□ -1.23
Scn9a-206ENSMUST00000164384 Ccdc180J3QNE4 1664 aa7.34□□□□□ -1.23
Scn9a-206ENSMUST00000164384 CatipB9EKE5 520 aa7.34□□□□□ -1.23
Scn9a-206ENSMUST00000164384 Npm1Q61937 292 aaKnown RBP7.33□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Lmod3E9QA62 571 aa7.32□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Gm13695A2AK44 830 aa7.3□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Ap3b1Q9Z1T1 1105 aa7.29□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Fam71e1A1L3C1 212 aa7.29□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Chic1Q8CBW7 227 aa7.28□□□□□ -1.24
Scn9a-206ENSMUST00000164384 Irx3P81067 507 aa7.27□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Zbtb7cQ8VCZ7 619 aa7.27□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Atp1b4Q99ME6 356 aa7.27□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Sall2Q9QX96 1004 aa7.27□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Safb2Q80YR5 991 aaKnown RBP7.26□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Ppp4r2Q0VGB7 417 aa7.25□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Calr4Q3TQS0 420 aa7.25□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Ccdc27Q3V036 639 aa7.25□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Upf2A2AT37 1269 aaKnown RBP7.25□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Mier1Q5UAK0 511 aa7.24□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Hnrnpul2Q00PI9 745 aaKnown RBP7.23□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Trim44Q9QXA7 346 aa7.23□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Wdr43Q6ZQL4 677 aaKnown RBP7.22□□□□□ -1.25
Scn9a-206ENSMUST00000164384 Mapk8ip2Q9ERE9 830 aa7.21□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Fam50aQ9WV03 339 aaKnown RBP7.21□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Tnnt2P50752 301 aa7.19□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Pknox2Q8BG99 474 aa7.18□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Fkbp15Q6P9Q6 1216 aaKnown RBP7.17□□□□□ -1.26
Scn9a-206ENSMUST00000164384 ArxO35085 564 aa7.16□□□□□ -1.26
Scn9a-206ENSMUST00000164384 AU015836B2RUM3 263 aa7.15□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Erich6D3Z6S9 713 aa7.15□□□□□ -1.26
Scn9a-206ENSMUST00000164384 Rtl1Q7M732 1744 aa7.14□□□□□ -1.27
Scn9a-206ENSMUST00000164384 Ubl4bQ9CQ84 188 aa7.14□□□□□ -1.27
Scn9a-206ENSMUST00000164384 Dcaf1Q80TR8 1506 aa7.11□□□□□ -1.27
Scn9a-206ENSMUST00000164384 Znf326O88291 580 aa7.1□□□□□ -1.27
Scn9a-206ENSMUST00000164384 CanxP35564 591 aaKnown RBP7.1□□□□□ -1.27
Scn9a-206ENSMUST00000164384 Taok2Q6ZQ29 1240 aa7.09□□□□□ -1.27
Scn9a-206ENSMUST00000164384 PrkcshO08795 521 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 210.5 ms