RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 NischQ80TM9 1593 aa25.18■■□□□ 1.62
Usf1-208ENSMUST00000161241 Gm35339A0A140LHH9 1649 aa24.68■■□□□ 1.54
Usf1-208ENSMUST00000161241 Abcc9P70170 1546 aa24.52■■□□□ 1.52
Usf1-208ENSMUST00000161241 Rtl1Q7M732 1744 aa24.02■■□□□ 1.44
Usf1-208ENSMUST00000161241 Abcc8B2RUS7 1588 aa23.81■■□□□ 1.4
Usf1-208ENSMUST00000161241 Ccdc180J3QNE4 1664 aa23.59■■□□□ 1.37
Usf1-208ENSMUST00000161241 Rhox8Q6VSS7 320 aa23.57■■□□□ 1.36
Usf1-208ENSMUST00000161241 Rpgrip1Q9EPQ2 1331 aa23.11■■□□□ 1.29
Usf1-208ENSMUST00000161241 Zcchc6Q5BLK4 1491 aaKnown RBP22.86■■□□□ 1.25
Usf1-208ENSMUST00000161241 Chic1Q8CBW7 227 aa22.49■■□□□ 1.19
Usf1-208ENSMUST00000161241 Acin1Q9JIX8 1338 aaKnown RBP22.45■■□□□ 1.18
Usf1-208ENSMUST00000161241 Dcaf1Q80TR8 1506 aa22.41■■□□□ 1.18
Usf1-208ENSMUST00000161241 HrcG5E8J6 738 aa22.34■■□□□ 1.17
Usf1-208ENSMUST00000161241 Rb1cc1Q9ESK9 1588 aa22.1■■□□□ 1.13
Usf1-208ENSMUST00000161241 ScribQ80U72 1612 aa22.1■■□□□ 1.13
Usf1-208ENSMUST00000161241 Baz1aO88379 1555 aa21.89■■□□□ 1.09
Usf1-208ENSMUST00000161241 Ehmt2Q9Z148 1263 aaKnown RBP21.81■■□□□ 1.08
Usf1-208ENSMUST00000161241 Ccdc136Q3TVA9 1136 aa21.78■■□□□ 1.08
Usf1-208ENSMUST00000161241 Pcgf6Q99NA9 353 aa21.68■■□□□ 1.06
Usf1-208ENSMUST00000161241 Kdm5dQ62240 1548 aa21.64■■□□□ 1.05
Usf1-208ENSMUST00000161241 Trim41Q5NCC3 630 aa21.61■■□□□ 1.05
Usf1-208ENSMUST00000161241 Cep164Q5DU05 1446 aa21.54■■□□□ 1.04
Usf1-208ENSMUST00000161241 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Usf1-208ENSMUST00000161241 NacadQ5SWP3 1504 aa21.45■■□□□ 1.02
Usf1-208ENSMUST00000161241 Smarca2Q6DIC0 1577 aa21.44■■□□□ 1.02
Usf1-208ENSMUST00000161241 Supt5hO55201 1082 aaKnown RBP21.16■□□□□ 0.98
Usf1-208ENSMUST00000161241 Mapk8ip2Q9ERE9 830 aa21.02■□□□□ 0.96
Usf1-208ENSMUST00000161241 Rsf1E9PWW9 1441 aaKnown RBP21.01■□□□□ 0.95
Usf1-208ENSMUST00000161241 Sycp2Q9CUU3 1500 aa20.96■□□□□ 0.95
Usf1-208ENSMUST00000161241 NefmP08553 848 aa20.95■□□□□ 0.94
Usf1-208ENSMUST00000161241 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Usf1-208ENSMUST00000161241 Golga3P55937 1487 aa20.84■□□□□ 0.93
Usf1-208ENSMUST00000161241 Cngb1E1AZ71 1325 aa20.83■□□□□ 0.93
Usf1-208ENSMUST00000161241 Neurod1Q60867 357 aa20.8■□□□□ 0.92
Usf1-208ENSMUST00000161241 Ccdc88bQ4QRL3 1481 aa20.79■□□□□ 0.92
Usf1-208ENSMUST00000161241 Gab3Q8BSM5 595 aa20.75■□□□□ 0.91
Usf1-208ENSMUST00000161241 Mier1Q5UAK0 511 aa20.73■□□□□ 0.91
Usf1-208ENSMUST00000161241 Zeb1Q64318 1117 aa20.7■□□□□ 0.9
Usf1-208ENSMUST00000161241 BicraF8VPZ9 1578 aa20.69■□□□□ 0.9
Usf1-208ENSMUST00000161241 Cecr2E9Q2Z1 1453 aa20.68■□□□□ 0.9
Usf1-208ENSMUST00000161241 Synj1Q8CHC4 1574 aa20.68■□□□□ 0.9
Usf1-208ENSMUST00000161241 Las1lA2BE28 776 aaKnown RBP20.63■□□□□ 0.89
Usf1-208ENSMUST00000161241 Phf23Q8BSN5 401 aa20.61■□□□□ 0.89
Usf1-208ENSMUST00000161241 Top2bQ64511 1612 aa20.6■□□□□ 0.89
Usf1-208ENSMUST00000161241 Sall2Q9QX96 1004 aa20.55■□□□□ 0.88
Usf1-208ENSMUST00000161241 CftrP26361 1476 aa20.5■□□□□ 0.87
Usf1-208ENSMUST00000161241 Plppr3Q7TPB0 716 aa20.49■□□□□ 0.87
Usf1-208ENSMUST00000161241 Cttnbp2B9EJA2 1648 aa20.44■□□□□ 0.86
Usf1-208ENSMUST00000161241 Anks4bQ8K3X6 423 aa20.42■□□□□ 0.86
Usf1-208ENSMUST00000161241 Rapgef2Q8CHG7 1496 aa20.38■□□□□ 0.85
Usf1-208ENSMUST00000161241 Esf1Q3V1V3 845 aaKnown RBP20.34■□□□□ 0.85
Usf1-208ENSMUST00000161241 Cc2d2aQ8CFW7 1633 aa20.32■□□□□ 0.84
Usf1-208ENSMUST00000161241 Fmn1Q05860 1466 aa20.23■□□□□ 0.83
Usf1-208ENSMUST00000161241 Top2aQ01320 1528 aaKnown RBP20.23■□□□□ 0.83
Usf1-208ENSMUST00000161241 UbtfP25976 765 aaKnown RBP20.21■□□□□ 0.83
Usf1-208ENSMUST00000161241 ClspnQ80YR7 1315 aa20.21■□□□□ 0.83
Usf1-208ENSMUST00000161241 Dnajc5bQ9CQ94 199 aa20.2■□□□□ 0.82
Usf1-208ENSMUST00000161241 Smarca4Q3TKT4 1613 aaKnown RBP20.17■□□□□ 0.82
Usf1-208ENSMUST00000161241 Aebp2Q9Z248 504 aaKnown RBP20.16■□□□□ 0.82
Usf1-208ENSMUST00000161241 Cep162Q6ZQ06 1403 aa20.16■□□□□ 0.82
Usf1-208ENSMUST00000161241 Wdr66E9Q743 1299 aa20.15■□□□□ 0.82
Usf1-208ENSMUST00000161241 1700123L14RikQ3V2K7 440 aa20.15■□□□□ 0.82
Usf1-208ENSMUST00000161241 Cdk11bP24788 784 aaKnown RBP20.11■□□□□ 0.81
Usf1-208ENSMUST00000161241 Pds5bQ4VA53 1446 aaKnown RBP20.09■□□□□ 0.81
Usf1-208ENSMUST00000161241 Csrnp3P59055 597 aa20.08■□□□□ 0.81
Usf1-208ENSMUST00000161241 Nop58Q6DFW4 536 aaKnown RBP20.07■□□□□ 0.8
Usf1-208ENSMUST00000161241 Eif4g1Q6NZJ6 1600 aaKnown RBP20.02■□□□□ 0.79
Usf1-208ENSMUST00000161241 TonslQ6NZL6 1363 aa20.01■□□□□ 0.79
Usf1-208ENSMUST00000161241 Aplp2Q06335 707 aa20.01■□□□□ 0.79
Usf1-208ENSMUST00000161241 Ncapd3Q6ZQK0 1506 aa19.94■□□□□ 0.78
Usf1-208ENSMUST00000161241 Thoc2B1AZI6 1594 aaKnown RBP19.94■□□□□ 0.78
Usf1-208ENSMUST00000161241 Myt1lP97500 1187 aa19.91■□□□□ 0.78
Usf1-208ENSMUST00000161241 Clip1Q922J3 1391 aa19.91■□□□□ 0.78
Usf1-208ENSMUST00000161241 Myt1Q8CFC2 1127 aa19.9■□□□□ 0.78
Usf1-208ENSMUST00000161241 Atad2bE9Q166 1460 aaKnown RBP19.9■□□□□ 0.78
Usf1-208ENSMUST00000161241 Iqgap2Q3UQ44 1575 aa19.82■□□□□ 0.76
Usf1-208ENSMUST00000161241 Npm2Q80W85 207 aa19.82■□□□□ 0.76
Usf1-208ENSMUST00000161241 CenpbP27790 599 aa19.81■□□□□ 0.76
Usf1-208ENSMUST00000161241 TnnQ80Z71 1560 aa19.8■□□□□ 0.76
Usf1-208ENSMUST00000161241 Plekhg3Q4VAC9 1341 aa19.74■□□□□ 0.75
Usf1-208ENSMUST00000161241 Ercc6F8VPZ5 1481 aa19.71■□□□□ 0.75
Usf1-208ENSMUST00000161241 Arhgap35Q91YM2 1499 aa19.7■□□□□ 0.74
Usf1-208ENSMUST00000161241 Ppargc1bQ8VHJ7 1014 aa19.7■□□□□ 0.74
Usf1-208ENSMUST00000161241 Kdm5bQ80Y84 1544 aa19.69■□□□□ 0.74
Usf1-208ENSMUST00000161241 NrkQ9R0G8 1455 aa19.67■□□□□ 0.74
Usf1-208ENSMUST00000161241 Ccdc18Q640L5 1455 aa19.66■□□□□ 0.74
Usf1-208ENSMUST00000161241 Eea1Q8BL66 1411 aa19.65■□□□□ 0.74
Usf1-208ENSMUST00000161241 Kcna4Q61423 654 aa19.63■□□□□ 0.73
Usf1-208ENSMUST00000161241 Arap1Q4LDD4 1452 aa19.63■□□□□ 0.73
Usf1-208ENSMUST00000161241 Arhgef5E9Q7D5 1581 aa19.62■□□□□ 0.73
Usf1-208ENSMUST00000161241 TchhA0A0B4J1F9 1599 aa19.6■□□□□ 0.73
Usf1-208ENSMUST00000161241 Tnnt3Q9QZ47 272 aa19.56■□□□□ 0.72
Usf1-208ENSMUST00000161241 Map3k1P53349 1493 aa19.56■□□□□ 0.72
Usf1-208ENSMUST00000161241 PtprkP35822 1457 aa19.53■□□□□ 0.72
Usf1-208ENSMUST00000161241 Tiam1Q60610 1591 aa19.5■□□□□ 0.71
Usf1-208ENSMUST00000161241 Lamc3Q9R0B6 1581 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Shroom4Q1W617 1475 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Setd5Q5XJV7 1441 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Baz1bQ9Z277 1479 aa19.48■□□□□ 0.71
Usf1-208ENSMUST00000161241 Wdr62Q3U3T8 1523 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms