RNA–Protein interactions for RNA: ENSMUST00000159910.7

Vcan-206, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 8,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-206ENSMUST00000159910 Rpgrip1Q9EPQ2 1331 aa12.93□□□□□ -0.34
Vcan-206ENSMUST00000159910 Rhox8Q6VSS7 320 aa12.91□□□□□ -0.34
Vcan-206ENSMUST00000159910 Las1lA2BE28 776 aaKnown RBP12.73□□□□□ -0.37
Vcan-206ENSMUST00000159910 Cngb1E1AZ71 1325 aa12.71□□□□□ -0.38
Vcan-206ENSMUST00000159910 Pelp1Q9DBD5 1123 aaKnown RBP12.43□□□□□ -0.42
Vcan-206ENSMUST00000159910 Myt1Q8CFC2 1127 aa12.31□□□□□ -0.44
Vcan-206ENSMUST00000159910 Amer1Q7TS75 1132 aa12.08□□□□□ -0.48
Vcan-206ENSMUST00000159910 Wdr66E9Q743 1299 aa11.79□□□□□ -0.52
Vcan-206ENSMUST00000159910 CenpbP27790 599 aa11.79□□□□□ -0.52
Vcan-206ENSMUST00000159910 4930567H17RikQ3V0K5 233 aa11.72□□□□□ -0.53
Vcan-206ENSMUST00000159910 Rtl1Q7M732 1744 aa11.59□□□□□ -0.55
Vcan-206ENSMUST00000159910 Esf1Q3V1V3 845 aaKnown RBP11.54□□□□□ -0.56
Vcan-206ENSMUST00000159910 Trim41Q5NCC3 630 aa11.47□□□□□ -0.57
Vcan-206ENSMUST00000159910 Ehmt2Q9Z148 1263 aaKnown RBP11.46□□□□□ -0.57
Vcan-206ENSMUST00000159910 DiexfQ8BTT6 772 aaKnown RBP11.45□□□□□ -0.58
Vcan-206ENSMUST00000159910 Rtl5Q5DTT4 599 aa11.44□□□□□ -0.58
Vcan-206ENSMUST00000159910 Ube2uB1AUC4 352 aa11.42□□□□□ -0.58
Vcan-206ENSMUST00000159910 Zeb1Q64318 1117 aa11.36□□□□□ -0.59
Vcan-206ENSMUST00000159910 Stra8P70278 393 aa11.35□□□□□ -0.59
Vcan-206ENSMUST00000159910 Npm2Q80W85 207 aa11.3□□□□□ -0.6
Vcan-206ENSMUST00000159910 Ccdc136Q3TVA9 1136 aa11.26□□□□□ -0.61
Vcan-206ENSMUST00000159910 NischQ80TM9 1593 aa11.25□□□□□ -0.61
Vcan-206ENSMUST00000159910 Ccdc180J3QNE4 1664 aa11.18□□□□□ -0.62
Vcan-206ENSMUST00000159910 Ythdc1E9Q5K9 736 aaKnown RBP11.16□□□□□ -0.62
Vcan-206ENSMUST00000159910 Acin1Q9JIX8 1338 aaKnown RBP11.12□□□□□ -0.63
Vcan-206ENSMUST00000159910 Tnnt3Q9QZ47 272 aa11.11□□□□□ -0.63
Vcan-206ENSMUST00000159910 NefmP08553 848 aa11.09□□□□□ -0.63
Vcan-206ENSMUST00000159910 Gab3Q8BSM5 595 aa11.02□□□□□ -0.65
Vcan-206ENSMUST00000159910 Myt1lP97500 1187 aa11.02□□□□□ -0.65
Vcan-206ENSMUST00000159910 4933416C03RikQ3V063 378 aa11.02□□□□□ -0.65
Vcan-206ENSMUST00000159910 Ttbk1Q6PCN3 1308 aa10.99□□□□□ -0.65
Vcan-206ENSMUST00000159910 Anp32bQ9EST5 272 aaKnown RBP10.97□□□□□ -0.65
Vcan-206ENSMUST00000159910 Ccdc9Q8VC31 543 aaKnown RBP10.93□□□□□ -0.66
Vcan-206ENSMUST00000159910 Cdk11bP24788 784 aaKnown RBP10.86□□□□□ -0.67
Vcan-206ENSMUST00000159910 Gm35339A0A140LHH9 1649 aa10.85□□□□□ -0.67
Vcan-206ENSMUST00000159910 HrcG5E8J6 738 aa10.81□□□□□ -0.68
Vcan-206ENSMUST00000159910 Pcgf6Q99NA9 353 aa10.79□□□□□ -0.68
Vcan-206ENSMUST00000159910 NeflP08551 543 aa10.76□□□□□ -0.69
Vcan-206ENSMUST00000159910 Slc24a1Q91WD8 1130 aa10.75□□□□□ -0.69
Vcan-206ENSMUST00000159910 NrdcQ8BHG1 1161 aa10.74□□□□□ -0.69
Vcan-206ENSMUST00000159910 UbtfP25976 765 aaKnown RBP10.73□□□□□ -0.69
Vcan-206ENSMUST00000159910 Neurod1Q60867 357 aa10.67□□□□□ -0.7
Vcan-206ENSMUST00000159910 Hdac5Q9Z2V6 1113 aa10.66□□□□□ -0.7
Vcan-206ENSMUST00000159910 Anp32aO35381 247 aa10.64□□□□□ -0.71
Vcan-206ENSMUST00000159910 NclP09405 707 aaKnown RBP10.64□□□□□ -0.71
Vcan-206ENSMUST00000159910 Nop58Q6DFW4 536 aaKnown RBP10.59□□□□□ -0.71
Vcan-206ENSMUST00000159910 Os9Q8K2C7 672 aa10.59□□□□□ -0.71
Vcan-206ENSMUST00000159910 Il27Q8K3I6 234 aa10.59□□□□□ -0.71
Vcan-206ENSMUST00000159910 Aplp2Q06335 707 aa10.55□□□□□ -0.72
Vcan-206ENSMUST00000159910 Zcchc6Q5BLK4 1491 aaKnown RBP10.54□□□□□ -0.72
Vcan-206ENSMUST00000159910 Fam50aQ9WV03 339 aaKnown RBP10.53□□□□□ -0.72
Vcan-206ENSMUST00000159910 DaxxO35613 739 aa10.47□□□□□ -0.73
Vcan-206ENSMUST00000159910 Abcc9P70170 1546 aa10.46□□□□□ -0.73
Vcan-206ENSMUST00000159910 Eif5bQ05D44 1216 aaKnown RBP10.45□□□□□ -0.74
Vcan-206ENSMUST00000159910 Npm1Q61937 292 aaKnown RBP10.42□□□□□ -0.74
Vcan-206ENSMUST00000159910 TonslQ6NZL6 1363 aa10.41□□□□□ -0.74
Vcan-206ENSMUST00000159910 Anks4bQ8K3X6 423 aa10.41□□□□□ -0.74
Vcan-206ENSMUST00000159910 CatipB9EKE5 520 aa10.39□□□□□ -0.75
Vcan-206ENSMUST00000159910 Hsp90aa1P07901 733 aaKnown RBP10.39□□□□□ -0.75
Vcan-206ENSMUST00000159910 Bcl11aQ9QYE3 773 aa10.37□□□□□ -0.75
Vcan-206ENSMUST00000159910 Gm13697A2AK42 830 aa10.33□□□□□ -0.76
Vcan-206ENSMUST00000159910 Polr3glQ8R0C0 218 aa10.33□□□□□ -0.76
Vcan-206ENSMUST00000159910 Supt5hO55201 1082 aaKnown RBP10.31□□□□□ -0.76
Vcan-206ENSMUST00000159910 Ccer2J3QPU5 274 aa10.3□□□□□ -0.76
Vcan-206ENSMUST00000159910 Ap3b1Q9Z1T1 1105 aa10.29□□□□□ -0.76
Vcan-206ENSMUST00000159910 Tnnt2P50752 301 aa10.26□□□□□ -0.77
Vcan-206ENSMUST00000159910 Brd4Q9ESU6 1400 aaKnown RBP10.25□□□□□ -0.77
Vcan-206ENSMUST00000159910 Rangap1P46061 589 aaKnown RBP10.24□□□□□ -0.77
Vcan-206ENSMUST00000159910 Ppargc1bQ8VHJ7 1014 aa10.24□□□□□ -0.77
Vcan-206ENSMUST00000159910 ClspnQ80YR7 1315 aa10.23□□□□□ -0.77
Vcan-206ENSMUST00000159910 Hnrnpul2Q00PI9 745 aaKnown RBP10.22□□□□□ -0.77
Vcan-206ENSMUST00000159910 Upf2A2AT37 1269 aaKnown RBP10.21□□□□□ -0.77
Vcan-206ENSMUST00000159910 Adam1bQ8R534 806 aa10.21□□□□□ -0.78
Vcan-206ENSMUST00000159910 Nlrp6Q91WS2 869 aa10.21□□□□□ -0.78
Vcan-206ENSMUST00000159910 Znf326O88291 580 aa10.19□□□□□ -0.78
Vcan-206ENSMUST00000159910 Ccdc27Q3V036 639 aa10.18□□□□□ -0.78
Vcan-206ENSMUST00000159910 Trim44Q9QXA7 346 aa10.18□□□□□ -0.78
Vcan-206ENSMUST00000159910 BccipQ9CWI3 316 aa10.18□□□□□ -0.78
Vcan-206ENSMUST00000159910 Irx3P81067 507 aa10.17□□□□□ -0.78
Vcan-206ENSMUST00000159910 Gm13695A2AK44 830 aa10.17□□□□□ -0.78
Vcan-206ENSMUST00000159910 Clstn2Q9ER65 966 aa10.16□□□□□ -0.78
Vcan-206ENSMUST00000159910 Znf316Q6PGE4 1016 aa10.15□□□□□ -0.78
Vcan-206ENSMUST00000159910 Atp1b4Q99ME6 356 aa10.13□□□□□ -0.79
Vcan-206ENSMUST00000159910 Abcc8B2RUS7 1588 aa10.12□□□□□ -0.79
Vcan-206ENSMUST00000159910 Q8BT18 775 aa10.1□□□□□ -0.79
Vcan-206ENSMUST00000159910 Csrnp3P59055 597 aa10.09□□□□□ -0.79
Vcan-206ENSMUST00000159910 Lmod3E9QA62 571 aa10.08□□□□□ -0.8
Vcan-206ENSMUST00000159910 AU015836B2RUM3 263 aa10.08□□□□□ -0.8
Vcan-206ENSMUST00000159910 Pknox2Q8BG99 474 aa10.07□□□□□ -0.8
Vcan-206ENSMUST00000159910 Mier1Q5UAK0 511 aa10.07□□□□□ -0.8
Vcan-206ENSMUST00000159910 Map7d2A2AG50 781 aa10.06□□□□□ -0.8
Vcan-206ENSMUST00000159910 Erich6D3Z6S9 713 aa10.06□□□□□ -0.8
Vcan-206ENSMUST00000159910 Gm38655A0A286YDK6 273 aa10.05□□□□□ -0.8
Vcan-206ENSMUST00000159910 Zfp777B9EKF4 885 aa10.05□□□□□ -0.8
Vcan-206ENSMUST00000159910 Lmod2Q3UHZ5 550 aa10.04□□□□□ -0.8
Vcan-206ENSMUST00000159910 Htatsf1Q8BGC0 757 aa10.04□□□□□ -0.8
Vcan-206ENSMUST00000159910 Clip1Q922J3 1391 aa10.03□□□□□ -0.8
Vcan-206ENSMUST00000159910 Zbtb7cQ8VCZ7 619 aa10.02□□□□□ -0.81
Vcan-206ENSMUST00000159910 Dcaf1Q80TR8 1506 aa10.02□□□□□ -0.81
Vcan-206ENSMUST00000159910 Cep164Q5DU05 1446 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 113.4 ms