RNA–Protein interactions for RNA: ENSMUST00000152819.8

Pcdh15-228, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 2,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-228ENSMUST00000152819 NischQ80TM9 1593 aa15.11■□□□□ 0.01
Pcdh15-228ENSMUST00000152819 Abcc9P70170 1546 aa14.65□□□□□ -0.06
Pcdh15-228ENSMUST00000152819 Rhox8Q6VSS7 320 aa14.56□□□□□ -0.08
Pcdh15-228ENSMUST00000152819 Gm35339A0A140LHH9 1649 aa14.56□□□□□ -0.08
Pcdh15-228ENSMUST00000152819 Rtl1Q7M732 1744 aa14.4□□□□□ -0.1
Pcdh15-228ENSMUST00000152819 Ccdc180J3QNE4 1664 aa14.28□□□□□ -0.12
Pcdh15-228ENSMUST00000152819 Rpgrip1Q9EPQ2 1331 aa14.28□□□□□ -0.12
Pcdh15-228ENSMUST00000152819 Abcc8B2RUS7 1588 aa14.23□□□□□ -0.13
Pcdh15-228ENSMUST00000152819 Acin1Q9JIX8 1338 aaKnown RBP13.92□□□□□ -0.18
Pcdh15-228ENSMUST00000152819 Zcchc6Q5BLK4 1491 aaKnown RBP13.84□□□□□ -0.19
Pcdh15-228ENSMUST00000152819 Ehmt2Q9Z148 1263 aaKnown RBP13.77□□□□□ -0.21
Pcdh15-228ENSMUST00000152819 HrcG5E8J6 738 aa13.65□□□□□ -0.22
Pcdh15-228ENSMUST00000152819 Pcgf6Q99NA9 353 aa13.6□□□□□ -0.23
Pcdh15-228ENSMUST00000152819 Dcaf1Q80TR8 1506 aa13.59□□□□□ -0.23
Pcdh15-228ENSMUST00000152819 DiexfQ8BTT6 772 aaKnown RBP13.57□□□□□ -0.24
Pcdh15-228ENSMUST00000152819 Ccdc136Q3TVA9 1136 aa13.47□□□□□ -0.25
Pcdh15-228ENSMUST00000152819 Trim41Q5NCC3 630 aa13.32□□□□□ -0.28
Pcdh15-228ENSMUST00000152819 Supt5hO55201 1082 aaKnown RBP13.27□□□□□ -0.28
Pcdh15-228ENSMUST00000152819 Rb1cc1Q9ESK9 1588 aa13.27□□□□□ -0.29
Pcdh15-228ENSMUST00000152819 Myt1Q8CFC2 1127 aa13.25□□□□□ -0.29
Pcdh15-228ENSMUST00000152819 Amer1Q7TS75 1132 aa13.19□□□□□ -0.3
Pcdh15-228ENSMUST00000152819 Baz1aO88379 1555 aa13.11□□□□□ -0.31
Pcdh15-228ENSMUST00000152819 Cep164Q5DU05 1446 aa13.09□□□□□ -0.31
Pcdh15-228ENSMUST00000152819 Neurod1Q60867 357 aa13.08□□□□□ -0.32
Pcdh15-228ENSMUST00000152819 ScribQ80U72 1612 aa13.07□□□□□ -0.32
Pcdh15-228ENSMUST00000152819 CenpbP27790 599 aa13.06□□□□□ -0.32
Pcdh15-228ENSMUST00000152819 Bcl11aQ9QYE3 773 aa13.03□□□□□ -0.32
Pcdh15-228ENSMUST00000152819 Zeb1Q64318 1117 aa13□□□□□ -0.33
Pcdh15-228ENSMUST00000152819 Kdm5dQ62240 1548 aa12.94□□□□□ -0.34
Pcdh15-228ENSMUST00000152819 NefmP08553 848 aa12.92□□□□□ -0.34
Pcdh15-228ENSMUST00000152819 Gab3Q8BSM5 595 aa12.9□□□□□ -0.34
Pcdh15-228ENSMUST00000152819 Las1lA2BE28 776 aaKnown RBP12.89□□□□□ -0.35
Pcdh15-228ENSMUST00000152819 Cngb1E1AZ71 1325 aa12.88□□□□□ -0.35
Pcdh15-228ENSMUST00000152819 Mier1Q5UAK0 511 aa12.87□□□□□ -0.35
Pcdh15-228ENSMUST00000152819 Chic1Q8CBW7 227 aa12.86□□□□□ -0.35
Pcdh15-228ENSMUST00000152819 Sall2Q9QX96 1004 aa12.84□□□□□ -0.35
Pcdh15-228ENSMUST00000152819 Smarca2Q6DIC0 1577 aa12.83□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 Ttbk1Q6PCN3 1308 aa12.82□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 Rsf1E9PWW9 1441 aaKnown RBP12.81□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 CatipB9EKE5 520 aa12.81□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 Plppr3Q7TPB0 716 aa12.81□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 NacadQ5SWP3 1504 aa12.78□□□□□ -0.36
Pcdh15-228ENSMUST00000152819 Crybg2B7ZCC2 1516 aa12.75□□□□□ -0.37
Pcdh15-228ENSMUST00000152819 PrkcshO08795 521 aa12.75□□□□□ -0.37
Pcdh15-228ENSMUST00000152819 Anks4bQ8K3X6 423 aa12.73□□□□□ -0.37
Pcdh15-228ENSMUST00000152819 1700123L14RikQ3V2K7 440 aa12.69□□□□□ -0.38
Pcdh15-228ENSMUST00000152819 Ube2uB1AUC4 352 aa12.67□□□□□ -0.38
Pcdh15-228ENSMUST00000152819 Ccdc88bQ4QRL3 1481 aa12.67□□□□□ -0.38
Pcdh15-228ENSMUST00000152819 Csrnp3P59055 597 aa12.67□□□□□ -0.38
Pcdh15-228ENSMUST00000152819 Wdr66E9Q743 1299 aa12.63□□□□□ -0.39
Pcdh15-228ENSMUST00000152819 Brd4Q9ESU6 1400 aaKnown RBP12.61□□□□□ -0.39
Pcdh15-228ENSMUST00000152819 Golga3P55937 1487 aa12.6□□□□□ -0.39
Pcdh15-228ENSMUST00000152819 Aebp2Q9Z248 504 aaKnown RBP12.58□□□□□ -0.4
Pcdh15-228ENSMUST00000152819 UbtfP25976 765 aaKnown RBP12.57□□□□□ -0.4
Pcdh15-228ENSMUST00000152819 Cdk11bP24788 784 aaKnown RBP12.55□□□□□ -0.4
Pcdh15-228ENSMUST00000152819 Nop58Q6DFW4 536 aaKnown RBP12.52□□□□□ -0.4
Pcdh15-228ENSMUST00000152819 Cecr2E9Q2Z1 1453 aa12.5□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 ClspnQ80YR7 1315 aa12.5□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 Sycp2Q9CUU3 1500 aa12.49□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 Esf1Q3V1V3 845 aaKnown RBP12.49□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 Aplp2Q06335 707 aa12.48□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 Ppargc1bQ8VHJ7 1014 aa12.48□□□□□ -0.41
Pcdh15-228ENSMUST00000152819 Synj1Q8CHC4 1574 aa12.45□□□□□ -0.42
Pcdh15-228ENSMUST00000152819 TonslQ6NZL6 1363 aa12.38□□□□□ -0.43
Pcdh15-228ENSMUST00000152819 Gm38655A0A286YDK6 273 aa12.34□□□□□ -0.43
Pcdh15-228ENSMUST00000152819 Myt1lP97500 1187 aa12.34□□□□□ -0.43
Pcdh15-228ENSMUST00000152819 Top2bQ64511 1612 aa12.33□□□□□ -0.44
Pcdh15-228ENSMUST00000152819 CftrP26361 1476 aa12.33□□□□□ -0.44
Pcdh15-228ENSMUST00000152819 Rapgef2Q8CHG7 1496 aa12.33□□□□□ -0.44
Pcdh15-228ENSMUST00000152819 Cep162Q6ZQ06 1403 aa12.25□□□□□ -0.45
Pcdh15-228ENSMUST00000152819 Pknox2Q8BG99 474 aa12.24□□□□□ -0.45
Pcdh15-228ENSMUST00000152819 Cc2d2aQ8CFW7 1633 aa12.24□□□□□ -0.45
Pcdh15-228ENSMUST00000152819 Plekhg3Q4VAC9 1341 aa12.22□□□□□ -0.45
Pcdh15-228ENSMUST00000152819 Gtf3c5Q8R2T8 520 aa12.21□□□□□ -0.45
Pcdh15-228ENSMUST00000152819 Npm2Q80W85 207 aa12.2□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 Cttnbp2B9EJA2 1648 aa12.19□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 Clip1Q922J3 1391 aa12.19□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 Fmn1Q05860 1466 aa12.18□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 Top2aQ01320 1528 aaKnown RBP12.17□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 BicraF8VPZ9 1578 aa12.16□□□□□ -0.46
Pcdh15-228ENSMUST00000152819 Ncapd3Q6ZQK0 1506 aa12.14□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 ArxO35085 564 aa12.14□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 Hnrnpul2Q00PI9 745 aaKnown RBP12.12□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 Tnnt3Q9QZ47 272 aa12.12□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 SafbD3YXK2 937 aaKnown RBP12.09□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 BccipQ9CWI3 316 aa12.09□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 Fam71e1A1L3C1 212 aa12.09□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 Eid3Q3V124 375 aa12.08□□□□□ -0.47
Pcdh15-228ENSMUST00000152819 Dnajc5bQ9CQ94 199 aa12.06□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Mapk8ip2Q9ERE9 830 aa12.06□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Ifnlr1Q8CGK5 535 aa12.06□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Ap3b1Q9Z1T1 1105 aa12.05□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Fgd1P52734 960 aa12.04□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Smarca4Q3TKT4 1613 aaKnown RBP12.03□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 NrdcQ8BHG1 1161 aa12.02□□□□□ -0.48
Pcdh15-228ENSMUST00000152819 Eif4g1Q6NZJ6 1600 aaKnown RBP11.99□□□□□ -0.49
Pcdh15-228ENSMUST00000152819 TimelessQ9R1X4 1197 aa11.96□□□□□ -0.5
Pcdh15-228ENSMUST00000152819 Eea1Q8BL66 1411 aa11.94□□□□□ -0.5
Pcdh15-228ENSMUST00000152819 Kdm5bQ80Y84 1544 aa11.94□□□□□ -0.5
Pcdh15-228ENSMUST00000152819 Arap1Q4LDD4 1452 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms