RNA–Protein interactions for RNA: ENSMUST00000121227.7

Col12a1-202, Transcript of Collagen alpha-1(XII) chain, mousemouse

TSL 5 BASIC

Gene Col12a1, Length 9,953 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1-202ENSMUST00000121227 Rhox8Q6VSS7 320 aa15.26■□□□□ 0.03
Col12a1-202ENSMUST00000121227 Rpgrip1Q9EPQ2 1331 aa14.47□□□□□ -0.09
Col12a1-202ENSMUST00000121227 Cngb1E1AZ71 1325 aa14.15□□□□□ -0.14
Col12a1-202ENSMUST00000121227 Las1lA2BE28 776 aaKnown RBP14.03□□□□□ -0.16
Col12a1-202ENSMUST00000121227 Pelp1Q9DBD5 1123 aaKnown RBP13.91□□□□□ -0.18
Col12a1-202ENSMUST00000121227 Ehmt2Q9Z148 1263 aaKnown RBP13.69□□□□□ -0.22
Col12a1-202ENSMUST00000121227 Wdr66E9Q743 1299 aa13.63□□□□□ -0.23
Col12a1-202ENSMUST00000121227 Esf1Q3V1V3 845 aaKnown RBP13.53□□□□□ -0.24
Col12a1-202ENSMUST00000121227 Ube2uB1AUC4 352 aa13.52□□□□□ -0.24
Col12a1-202ENSMUST00000121227 Ccdc136Q3TVA9 1136 aa13.43□□□□□ -0.26
Col12a1-202ENSMUST00000121227 Zeb1Q64318 1117 aa13.42□□□□□ -0.26
Col12a1-202ENSMUST00000121227 Rtl1Q7M732 1744 aa13.35□□□□□ -0.27
Col12a1-202ENSMUST00000121227 Trim41Q5NCC3 630 aa13.33□□□□□ -0.28
Col12a1-202ENSMUST00000121227 Npm2Q80W85 207 aa13.3□□□□□ -0.28
Col12a1-202ENSMUST00000121227 Stra8P70278 393 aa13.24□□□□□ -0.29
Col12a1-202ENSMUST00000121227 CenpbP27790 599 aa13.22□□□□□ -0.29
Col12a1-202ENSMUST00000121227 Gab3Q8BSM5 595 aa13.21□□□□□ -0.29
Col12a1-202ENSMUST00000121227 Amer1Q7TS75 1132 aa13.21□□□□□ -0.29
Col12a1-202ENSMUST00000121227 Ccdc180J3QNE4 1664 aa13.2□□□□□ -0.3
Col12a1-202ENSMUST00000121227 NischQ80TM9 1593 aa13.17□□□□□ -0.3
Col12a1-202ENSMUST00000121227 Myt1lP97500 1187 aa13.11□□□□□ -0.31
Col12a1-202ENSMUST00000121227 NefmP08553 848 aa13.1□□□□□ -0.31
Col12a1-202ENSMUST00000121227 Acin1Q9JIX8 1338 aaKnown RBP13.04□□□□□ -0.32
Col12a1-202ENSMUST00000121227 4930567H17RikQ3V0K5 233 aa12.97□□□□□ -0.33
Col12a1-202ENSMUST00000121227 Myt1Q8CFC2 1127 aa12.93□□□□□ -0.34
Col12a1-202ENSMUST00000121227 UbtfP25976 765 aaKnown RBP12.88□□□□□ -0.35
Col12a1-202ENSMUST00000121227 Slc24a1Q91WD8 1130 aa12.84□□□□□ -0.35
Col12a1-202ENSMUST00000121227 Anp32bQ9EST5 272 aaKnown RBP12.78□□□□□ -0.36
Col12a1-202ENSMUST00000121227 Cdk11bP24788 784 aaKnown RBP12.76□□□□□ -0.37
Col12a1-202ENSMUST00000121227 Tnnt3Q9QZ47 272 aa12.76□□□□□ -0.37
Col12a1-202ENSMUST00000121227 NeflP08551 543 aa12.74□□□□□ -0.37
Col12a1-202ENSMUST00000121227 NrdcQ8BHG1 1161 aa12.71□□□□□ -0.38
Col12a1-202ENSMUST00000121227 4933416C03RikQ3V063 378 aa12.68□□□□□ -0.38
Col12a1-202ENSMUST00000121227 Ttbk1Q6PCN3 1308 aa12.68□□□□□ -0.38
Col12a1-202ENSMUST00000121227 HrcG5E8J6 738 aa12.65□□□□□ -0.38
Col12a1-202ENSMUST00000121227 Rtl5Q5DTT4 599 aa12.58□□□□□ -0.4
Col12a1-202ENSMUST00000121227 NclP09405 707 aaKnown RBP12.57□□□□□ -0.4
Col12a1-202ENSMUST00000121227 Nop58Q6DFW4 536 aaKnown RBP12.56□□□□□ -0.4
Col12a1-202ENSMUST00000121227 Pcgf6Q99NA9 353 aa12.52□□□□□ -0.4
Col12a1-202ENSMUST00000121227 Fam50aQ9WV03 339 aaKnown RBP12.52□□□□□ -0.41
Col12a1-202ENSMUST00000121227 Il27Q8K3I6 234 aa12.49□□□□□ -0.41
Col12a1-202ENSMUST00000121227 Os9Q8K2C7 672 aa12.49□□□□□ -0.41
Col12a1-202ENSMUST00000121227 Eif5bQ05D44 1216 aaKnown RBP12.46□□□□□ -0.42
Col12a1-202ENSMUST00000121227 Neurod1Q60867 357 aa12.46□□□□□ -0.42
Col12a1-202ENSMUST00000121227 TonslQ6NZL6 1363 aa12.43□□□□□ -0.42
Col12a1-202ENSMUST00000121227 Zcchc6Q5BLK4 1491 aaKnown RBP12.38□□□□□ -0.43
Col12a1-202ENSMUST00000121227 Ap3b1Q9Z1T1 1105 aa12.36□□□□□ -0.43
Col12a1-202ENSMUST00000121227 Supt5hO55201 1082 aaKnown RBP12.23□□□□□ -0.45
Col12a1-202ENSMUST00000121227 Anp32aO35381 247 aa12.2□□□□□ -0.46
Col12a1-202ENSMUST00000121227 ClspnQ80YR7 1315 aa12.18□□□□□ -0.46
Col12a1-202ENSMUST00000121227 Ppargc1bQ8VHJ7 1014 aa12.17□□□□□ -0.46
Col12a1-202ENSMUST00000121227 Mier1Q5UAK0 511 aa12.15□□□□□ -0.46
Col12a1-202ENSMUST00000121227 DaxxO35613 739 aa12.14□□□□□ -0.47
Col12a1-202ENSMUST00000121227 Hdac5Q9Z2V6 1113 aa12.14□□□□□ -0.47
Col12a1-202ENSMUST00000121227 Abcc9P70170 1546 aa12.13□□□□□ -0.47
Col12a1-202ENSMUST00000121227 Gm35339A0A140LHH9 1649 aa12.12□□□□□ -0.47
Col12a1-202ENSMUST00000121227 DiexfQ8BTT6 772 aaKnown RBP12.11□□□□□ -0.47
Col12a1-202ENSMUST00000121227 Nlrp6Q91WS2 869 aa12.08□□□□□ -0.48
Col12a1-202ENSMUST00000121227 Gm13697A2AK42 830 aa12.05□□□□□ -0.48
Col12a1-202ENSMUST00000121227 Hnrnpul2Q00PI9 745 aaKnown RBP12.05□□□□□ -0.48
Col12a1-202ENSMUST00000121227 Npm1Q61937 292 aaKnown RBP12.03□□□□□ -0.48
Col12a1-202ENSMUST00000121227 Zbtb7cQ8VCZ7 619 aa12.01□□□□□ -0.49
Col12a1-202ENSMUST00000121227 Plekhg3Q4VAC9 1341 aa11.97□□□□□ -0.49
Col12a1-202ENSMUST00000121227 Lmod2Q3UHZ5 550 aa11.97□□□□□ -0.49
Col12a1-202ENSMUST00000121227 Atp1b4Q99ME6 356 aa11.94□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Polr3glQ8R0C0 218 aa11.94□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Chic1Q8CBW7 227 aa11.93□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Erich6D3Z6S9 713 aa11.93□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Upf2A2AT37 1269 aaKnown RBP11.93□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Ccer2J3QPU5 274 aa11.9□□□□□ -0.5
Col12a1-202ENSMUST00000121227 Brd4Q9ESU6 1400 aaKnown RBP11.88□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Gm13695A2AK44 830 aa11.87□□□□□ -0.51
Col12a1-202ENSMUST00000121227 CatipB9EKE5 520 aa11.87□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Abcc8B2RUS7 1588 aa11.86□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Anks4bQ8K3X6 423 aa11.85□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Ccdc9Q8VC31 543 aaKnown RBP11.85□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Dcaf1Q80TR8 1506 aa11.85□□□□□ -0.51
Col12a1-202ENSMUST00000121227 Zbtb4Q5F293 982 aa11.85□□□□□ -0.51
Col12a1-202ENSMUST00000121227 ArxO35085 564 aa11.83□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Clip1Q922J3 1391 aa11.82□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Hsp90aa1P07901 733 aaKnown RBP11.81□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Ythdc1E9Q5K9 736 aaKnown RBP11.81□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Aplp2Q06335 707 aa11.81□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Cep164Q5DU05 1446 aa11.8□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Calr4Q3TQS0 420 aa11.8□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Prdm10Q3UTQ7 1184 aa11.78□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Ifnlr1Q8CGK5 535 aa11.78□□□□□ -0.52
Col12a1-202ENSMUST00000121227 Ppp4r2Q0VGB7 417 aa11.76□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Eid3Q3V124 375 aa11.75□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Mapk8ip2Q9ERE9 830 aa11.75□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Rb1cc1Q9ESK9 1588 aa11.74□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Csrnp3P59055 597 aa11.73□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Wdr43Q6ZQL4 677 aaKnown RBP11.71□□□□□ -0.53
Col12a1-202ENSMUST00000121227 Trim44Q9QXA7 346 aa11.69□□□□□ -0.54
Col12a1-202ENSMUST00000121227 DekQ7TNV0 380 aaKnown RBP11.68□□□□□ -0.54
Col12a1-202ENSMUST00000121227 Clstn2Q9ER65 966 aa11.68□□□□□ -0.54
Col12a1-202ENSMUST00000121227 Sall2Q9QX96 1004 aa11.67□□□□□ -0.54
Col12a1-202ENSMUST00000121227 Fgd1P52734 960 aa11.64□□□□□ -0.55
Col12a1-202ENSMUST00000121227 Gm38655A0A286YDK6 273 aa11.63□□□□□ -0.55
Col12a1-202ENSMUST00000121227 Rad21Q61550 635 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms