RNA–Protein interactions for RNA: ENSMUST00000116522.7

Nck1-202, Transcript of Cytoplasmic protein NCK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nck1, Length 4,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-202ENSMUST00000116522 Rhox8Q6VSS7 320 aa26.12■■□□□ 1.77
Nck1-202ENSMUST00000116522 NischQ80TM9 1593 aa24.13■■□□□ 1.45
Nck1-202ENSMUST00000116522 Ehmt2Q9Z148 1263 aaKnown RBP23.93■■□□□ 1.42
Nck1-202ENSMUST00000116522 Rpgrip1Q9EPQ2 1331 aa23.72■■□□□ 1.39
Nck1-202ENSMUST00000116522 Ccdc136Q3TVA9 1136 aa23.6■■□□□ 1.37
Nck1-202ENSMUST00000116522 Cngb1E1AZ71 1325 aa22.96■■□□□ 1.27
Nck1-202ENSMUST00000116522 Trim41Q5NCC3 630 aa22.94■■□□□ 1.26
Nck1-202ENSMUST00000116522 Gab3Q8BSM5 595 aa22.9■■□□□ 1.26
Nck1-202ENSMUST00000116522 Esf1Q3V1V3 845 aaKnown RBP22.76■■□□□ 1.23
Nck1-202ENSMUST00000116522 Abcc9P70170 1546 aa22.74■■□□□ 1.23
Nck1-202ENSMUST00000116522 Acin1Q9JIX8 1338 aaKnown RBP22.69■■□□□ 1.22
Nck1-202ENSMUST00000116522 Zeb1Q64318 1117 aa22.68■■□□□ 1.22
Nck1-202ENSMUST00000116522 Ccdc180J3QNE4 1664 aa22.56■■□□□ 1.2
Nck1-202ENSMUST00000116522 Wdr66E9Q743 1299 aa22.51■■□□□ 1.19
Nck1-202ENSMUST00000116522 HrcG5E8J6 738 aa22.35■■□□□ 1.17
Nck1-202ENSMUST00000116522 Las1lA2BE28 776 aaKnown RBP22.34■■□□□ 1.17
Nck1-202ENSMUST00000116522 Rtl1Q7M732 1744 aa22.31■■□□□ 1.16
Nck1-202ENSMUST00000116522 Myt1lP97500 1187 aa22.28■■□□□ 1.16
Nck1-202ENSMUST00000116522 Abcc8B2RUS7 1588 aa22.23■■□□□ 1.15
Nck1-202ENSMUST00000116522 Npm2Q80W85 207 aa22.2■■□□□ 1.14
Nck1-202ENSMUST00000116522 Pcgf6Q99NA9 353 aa22.06■■□□□ 1.12
Nck1-202ENSMUST00000116522 UbtfP25976 765 aaKnown RBP22.06■■□□□ 1.12
Nck1-202ENSMUST00000116522 Zcchc6Q5BLK4 1491 aaKnown RBP21.97■■□□□ 1.11
Nck1-202ENSMUST00000116522 NefmP08553 848 aa21.96■■□□□ 1.11
Nck1-202ENSMUST00000116522 Ube2uB1AUC4 352 aa21.88■■□□□ 1.09
Nck1-202ENSMUST00000116522 Gm35339A0A140LHH9 1649 aa21.77■■□□□ 1.08
Nck1-202ENSMUST00000116522 Supt5hO55201 1082 aaKnown RBP21.74■■□□□ 1.07
Nck1-202ENSMUST00000116522 Ppargc1bQ8VHJ7 1014 aa21.57■■□□□ 1.04
Nck1-202ENSMUST00000116522 Il27Q8K3I6 234 aa21.56■■□□□ 1.04
Nck1-202ENSMUST00000116522 Mier1Q5UAK0 511 aa21.46■■□□□ 1.03
Nck1-202ENSMUST00000116522 Cdk11bP24788 784 aaKnown RBP21.39■■□□□ 1.02
Nck1-202ENSMUST00000116522 Ap3b1Q9Z1T1 1105 aa21.37■■□□□ 1.01
Nck1-202ENSMUST00000116522 CenpbP27790 599 aa21.35■■□□□ 1.01
Nck1-202ENSMUST00000116522 Chic1Q8CBW7 227 aa21.28■■□□□ 1
Nck1-202ENSMUST00000116522 Nop58Q6DFW4 536 aaKnown RBP21.28■■□□□ 1
Nck1-202ENSMUST00000116522 Slc24a1Q91WD8 1130 aa21.27■■□□□ 1
Nck1-202ENSMUST00000116522 Dcaf1Q80TR8 1506 aa21.26■□□□□ 0.99
Nck1-202ENSMUST00000116522 Rb1cc1Q9ESK9 1588 aa21.2■□□□□ 0.98
Nck1-202ENSMUST00000116522 Fam50aQ9WV03 339 aaKnown RBP21.19■□□□□ 0.98
Nck1-202ENSMUST00000116522 Cep164Q5DU05 1446 aa21.12■□□□□ 0.97
Nck1-202ENSMUST00000116522 TonslQ6NZL6 1363 aa21.12■□□□□ 0.97
Nck1-202ENSMUST00000116522 Pelp1Q9DBD5 1123 aaKnown RBP21.1■□□□□ 0.97
Nck1-202ENSMUST00000116522 Plekhg3Q4VAC9 1341 aa21.09■□□□□ 0.97
Nck1-202ENSMUST00000116522 Neurod1Q60867 357 aa21.03■□□□□ 0.96
Nck1-202ENSMUST00000116522 Stra8P70278 393 aa21.03■□□□□ 0.96
Nck1-202ENSMUST00000116522 NclP09405 707 aaKnown RBP21.03■□□□□ 0.96
Nck1-202ENSMUST00000116522 Sall2Q9QX96 1004 aa21.01■□□□□ 0.95
Nck1-202ENSMUST00000116522 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Nck1-202ENSMUST00000116522 ClspnQ80YR7 1315 aa20.85■□□□□ 0.93
Nck1-202ENSMUST00000116522 Lmod2Q3UHZ5 550 aa20.85■□□□□ 0.93
Nck1-202ENSMUST00000116522 Eid3Q3V124 375 aa20.84■□□□□ 0.93
Nck1-202ENSMUST00000116522 Mapk8ip2Q9ERE9 830 aa20.75■□□□□ 0.91
Nck1-202ENSMUST00000116522 Tnnt3Q9QZ47 272 aa20.74■□□□□ 0.91
Nck1-202ENSMUST00000116522 Baz1aO88379 1555 aa20.74■□□□□ 0.91
Nck1-202ENSMUST00000116522 Eif5bQ05D44 1216 aaKnown RBP20.71■□□□□ 0.91
Nck1-202ENSMUST00000116522 Clip1Q922J3 1391 aa20.69■□□□□ 0.9
Nck1-202ENSMUST00000116522 Gm38655A0A286YDK6 273 aa20.66■□□□□ 0.9
Nck1-202ENSMUST00000116522 NacadQ5SWP3 1504 aa20.66■□□□□ 0.9
Nck1-202ENSMUST00000116522 NrdcQ8BHG1 1161 aa20.65■□□□□ 0.9
Nck1-202ENSMUST00000116522 Csrnp3P59055 597 aa20.64■□□□□ 0.89
Nck1-202ENSMUST00000116522 Npm1Q61937 292 aaKnown RBP20.59■□□□□ 0.89
Nck1-202ENSMUST00000116522 Anks4bQ8K3X6 423 aa20.57■□□□□ 0.88
Nck1-202ENSMUST00000116522 Rsf1E9PWW9 1441 aaKnown RBP20.55■□□□□ 0.88
Nck1-202ENSMUST00000116522 Kdm5dQ62240 1548 aa20.51■□□□□ 0.87
Nck1-202ENSMUST00000116522 Aebp2Q9Z248 504 aaKnown RBP20.5■□□□□ 0.87
Nck1-202ENSMUST00000116522 Golga3P55937 1487 aa20.48■□□□□ 0.87
Nck1-202ENSMUST00000116522 Ttbk1Q6PCN3 1308 aa20.46■□□□□ 0.87
Nck1-202ENSMUST00000116522 Myt1Q8CFC2 1127 aa20.4■□□□□ 0.86
Nck1-202ENSMUST00000116522 Zbtb7cQ8VCZ7 619 aa20.38■□□□□ 0.85
Nck1-202ENSMUST00000116522 Amer1Q7TS75 1132 aa20.35■□□□□ 0.85
Nck1-202ENSMUST00000116522 Anp32bQ9EST5 272 aaKnown RBP20.34■□□□□ 0.85
Nck1-202ENSMUST00000116522 Ccdc88bQ4QRL3 1481 aa20.29■□□□□ 0.84
Nck1-202ENSMUST00000116522 Zbtb4Q5F293 982 aa20.23■□□□□ 0.83
Nck1-202ENSMUST00000116522 Os9Q8K2C7 672 aa20.23■□□□□ 0.83
Nck1-202ENSMUST00000116522 BlmO88700 1416 aa20.22■□□□□ 0.83
Nck1-202ENSMUST00000116522 NeflP08551 543 aa20.21■□□□□ 0.83
Nck1-202ENSMUST00000116522 Aplp2Q06335 707 aa20.21■□□□□ 0.83
Nck1-202ENSMUST00000116522 Setd5Q5XJV7 1441 aa20.19■□□□□ 0.82
Nck1-202ENSMUST00000116522 1700123L14RikQ3V2K7 440 aa20.18■□□□□ 0.82
Nck1-202ENSMUST00000116522 Chic2Q9D9G3 165 aa20.18■□□□□ 0.82
Nck1-202ENSMUST00000116522 Anp32aO35381 247 aa20.17■□□□□ 0.82
Nck1-202ENSMUST00000116522 Ubl4bQ9CQ84 188 aa20.12■□□□□ 0.81
Nck1-202ENSMUST00000116522 Hnrnpul2Q00PI9 745 aaKnown RBP20.11■□□□□ 0.81
Nck1-202ENSMUST00000116522 4933416C03RikQ3V063 378 aa20.07■□□□□ 0.8
Nck1-202ENSMUST00000116522 Ccer2J3QPU5 274 aa20.06■□□□□ 0.8
Nck1-202ENSMUST00000116522 Fkbp15Q6P9Q6 1216 aaKnown RBP20.04■□□□□ 0.8
Nck1-202ENSMUST00000116522 Kif15Q6P9L6 1387 aa19.99■□□□□ 0.79
Nck1-202ENSMUST00000116522 Calr4Q3TQS0 420 aa19.99■□□□□ 0.79
Nck1-202ENSMUST00000116522 Eea1Q8BL66 1411 aa19.97■□□□□ 0.79
Nck1-202ENSMUST00000116522 ScribQ80U72 1612 aa19.97■□□□□ 0.79
Nck1-202ENSMUST00000116522 Mrs2Q5NCE8 434 aa19.96■□□□□ 0.79
Nck1-202ENSMUST00000116522 Ifnlr1Q8CGK5 535 aa19.95■□□□□ 0.78
Nck1-202ENSMUST00000116522 Rtl5Q5DTT4 599 aa19.93■□□□□ 0.78
Nck1-202ENSMUST00000116522 Cecr2E9Q2Z1 1453 aa19.93■□□□□ 0.78
Nck1-202ENSMUST00000116522 Cep162Q6ZQ06 1403 aa19.89■□□□□ 0.78
Nck1-202ENSMUST00000116522 Ppp4r2Q0VGB7 417 aa19.89■□□□□ 0.78
Nck1-202ENSMUST00000116522 Prdm10Q3UTQ7 1184 aa19.88■□□□□ 0.77
Nck1-202ENSMUST00000116522 Erich6D3Z6S9 713 aa19.88■□□□□ 0.77
Nck1-202ENSMUST00000116522 Smarca2Q6DIC0 1577 aa19.86■□□□□ 0.77
Nck1-202ENSMUST00000116522 Sycp2Q9CUU3 1500 aa19.85■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms