RNA–Protein interactions for RNA: ENSMUST00000116280.8

Knop1-205, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Knop1, Length 5,382 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-205ENSMUST00000116280 Rhox8Q6VSS7 320 aa27.63■■■□□ 2.01
Knop1-205ENSMUST00000116280 NischQ80TM9 1593 aa25.5■■□□□ 1.67
Knop1-205ENSMUST00000116280 Ccdc136Q3TVA9 1136 aa24.76■■□□□ 1.55
Knop1-205ENSMUST00000116280 Esf1Q3V1V3 845 aaKnown RBP24.76■■□□□ 1.55
Knop1-205ENSMUST00000116280 Cngb1E1AZ71 1325 aa24.46■■□□□ 1.51
Knop1-205ENSMUST00000116280 Trim41Q5NCC3 630 aa24.31■■□□□ 1.48
Knop1-205ENSMUST00000116280 Abcc9P70170 1546 aa24.26■■□□□ 1.47
Knop1-205ENSMUST00000116280 Zeb1Q64318 1117 aa24.05■■□□□ 1.44
Knop1-205ENSMUST00000116280 Npm2Q80W85 207 aa23.88■■□□□ 1.41
Knop1-205ENSMUST00000116280 Gab3Q8BSM5 595 aa23.84■■□□□ 1.41
Knop1-205ENSMUST00000116280 Gm35339A0A140LHH9 1649 aa23.8■■□□□ 1.4
Knop1-205ENSMUST00000116280 Ehmt2Q9Z148 1263 aaKnown RBP23.63■■□□□ 1.37
Knop1-205ENSMUST00000116280 Myt1lP97500 1187 aa23.56■■□□□ 1.36
Knop1-205ENSMUST00000116280 Abcc8B2RUS7 1588 aa23.51■■□□□ 1.35
Knop1-205ENSMUST00000116280 Zcchc6Q5BLK4 1491 aaKnown RBP23.5■■□□□ 1.35
Knop1-205ENSMUST00000116280 Ube2uB1AUC4 352 aa23.45■■□□□ 1.34
Knop1-205ENSMUST00000116280 Il27Q8K3I6 234 aa23.42■■□□□ 1.34
Knop1-205ENSMUST00000116280 Rpgrip1Q9EPQ2 1331 aa23.09■■□□□ 1.29
Knop1-205ENSMUST00000116280 Las1lA2BE28 776 aaKnown RBP22.89■■□□□ 1.25
Knop1-205ENSMUST00000116280 Npm1Q61937 292 aaKnown RBP22.77■■□□□ 1.24
Knop1-205ENSMUST00000116280 Wdr66E9Q743 1299 aa22.73■■□□□ 1.23
Knop1-205ENSMUST00000116280 HrcG5E8J6 738 aa22.72■■□□□ 1.23
Knop1-205ENSMUST00000116280 Ccdc180J3QNE4 1664 aa22.7■■□□□ 1.22
Knop1-205ENSMUST00000116280 UbtfP25976 765 aaKnown RBP22.67■■□□□ 1.22
Knop1-205ENSMUST00000116280 Rtl1Q7M732 1744 aa22.59■■□□□ 1.21
Knop1-205ENSMUST00000116280 Ap3b1Q9Z1T1 1105 aa22.51■■□□□ 1.19
Knop1-205ENSMUST00000116280 NacadQ5SWP3 1504 aa22.47■■□□□ 1.19
Knop1-205ENSMUST00000116280 Rb1cc1Q9ESK9 1588 aa22.39■■□□□ 1.17
Knop1-205ENSMUST00000116280 Ubl4bQ9CQ84 188 aa22.39■■□□□ 1.17
Knop1-205ENSMUST00000116280 Brd4Q9ESU6 1400 aaKnown RBP22.35■■□□□ 1.17
Knop1-205ENSMUST00000116280 Fam50aQ9WV03 339 aaKnown RBP22.23■■□□□ 1.15
Knop1-205ENSMUST00000116280 NefmP08553 848 aa22.12■■□□□ 1.13
Knop1-205ENSMUST00000116280 Ifnlr1Q8CGK5 535 aa22.12■■□□□ 1.13
Knop1-205ENSMUST00000116280 Lmod2Q3UHZ5 550 aa21.97■■□□□ 1.11
Knop1-205ENSMUST00000116280 Pelp1Q9DBD5 1123 aaKnown RBP21.92■■□□□ 1.1
Knop1-205ENSMUST00000116280 Kdm5dQ62240 1548 aa21.91■■□□□ 1.1
Knop1-205ENSMUST00000116280 Os9Q8K2C7 672 aa21.91■■□□□ 1.1
Knop1-205ENSMUST00000116280 Ercc6F8VPZ5 1481 aa21.89■■□□□ 1.09
Knop1-205ENSMUST00000116280 Acin1Q9JIX8 1338 aaKnown RBP21.89■■□□□ 1.09
Knop1-205ENSMUST00000116280 Fkbp15Q6P9Q6 1216 aaKnown RBP21.88■■□□□ 1.09
Knop1-205ENSMUST00000116280 NclP09405 707 aaKnown RBP21.88■■□□□ 1.09
Knop1-205ENSMUST00000116280 Baz1aO88379 1555 aa21.87■■□□□ 1.09
Knop1-205ENSMUST00000116280 Neurod1Q60867 357 aa21.86■■□□□ 1.09
Knop1-205ENSMUST00000116280 Ttbk1Q6PCN3 1308 aa21.83■■□□□ 1.09
Knop1-205ENSMUST00000116280 Zbtb7cQ8VCZ7 619 aa21.82■■□□□ 1.08
Knop1-205ENSMUST00000116280 Dcaf1Q80TR8 1506 aa21.81■■□□□ 1.08
Knop1-205ENSMUST00000116280 Slc24a1Q91WD8 1130 aa21.79■■□□□ 1.08
Knop1-205ENSMUST00000116280 Gm13697A2AK42 830 aa21.77■■□□□ 1.08
Knop1-205ENSMUST00000116280 Plekhg3Q4VAC9 1341 aa21.74■■□□□ 1.07
Knop1-205ENSMUST00000116280 Hnrnpul2Q00PI9 745 aaKnown RBP21.74■■□□□ 1.07
Knop1-205ENSMUST00000116280 Chic1Q8CBW7 227 aa21.74■■□□□ 1.07
Knop1-205ENSMUST00000116280 Kif15Q6P9L6 1387 aa21.7■■□□□ 1.06
Knop1-205ENSMUST00000116280 Rsf1E9PWW9 1441 aaKnown RBP21.7■■□□□ 1.06
Knop1-205ENSMUST00000116280 Plppr3Q7TPB0 716 aa21.62■■□□□ 1.05
Knop1-205ENSMUST00000116280 Pds5bQ4VA53 1446 aaKnown RBP21.62■■□□□ 1.05
Knop1-205ENSMUST00000116280 Anp32bQ9EST5 272 aaKnown RBP21.54■■□□□ 1.04
Knop1-205ENSMUST00000116280 Stra8P70278 393 aa21.54■■□□□ 1.04
Knop1-205ENSMUST00000116280 Clip1Q922J3 1391 aa21.53■■□□□ 1.04
Knop1-205ENSMUST00000116280 Cep164Q5DU05 1446 aa21.48■■□□□ 1.03
Knop1-205ENSMUST00000116280 Ccdc18Q640L5 1455 aa21.45■■□□□ 1.02
Knop1-205ENSMUST00000116280 Erich6D3Z6S9 713 aa21.45■■□□□ 1.02
Knop1-205ENSMUST00000116280 Sycp2Q9CUU3 1500 aa21.44■■□□□ 1.02
Knop1-205ENSMUST00000116280 Golga3P55937 1487 aa21.4■■□□□ 1.02
Knop1-205ENSMUST00000116280 Atp1b4Q99ME6 356 aa21.38■■□□□ 1.01
Knop1-205ENSMUST00000116280 Mier1Q5UAK0 511 aa21.37■■□□□ 1.01
Knop1-205ENSMUST00000116280 TonslQ6NZL6 1363 aa21.37■■□□□ 1.01
Knop1-205ENSMUST00000116280 NrdcQ8BHG1 1161 aa21.34■■□□□ 1.01
Knop1-205ENSMUST00000116280 Gm13695A2AK44 830 aa21.34■■□□□ 1.01
Knop1-205ENSMUST00000116280 Hdac5Q9Z2V6 1113 aa21.27■■□□□ 1
Knop1-205ENSMUST00000116280 Cdk11bP24788 784 aaKnown RBP21.24■□□□□ 0.99
Knop1-205ENSMUST00000116280 Arhgap27A2AB59 869 aa21.24■□□□□ 0.99
Knop1-205ENSMUST00000116280 Safb2Q80YR5 991 aaKnown RBP21.22■□□□□ 0.99
Knop1-205ENSMUST00000116280 BlmO88700 1416 aa21.16■□□□□ 0.98
Knop1-205ENSMUST00000116280 Setd5Q5XJV7 1441 aa21.16■□□□□ 0.98
Knop1-205ENSMUST00000116280 Zbtb4Q5F293 982 aa21.13■□□□□ 0.97
Knop1-205ENSMUST00000116280 ScribQ80U72 1612 aa21.13■□□□□ 0.97
Knop1-205ENSMUST00000116280 Ppargc1bQ8VHJ7 1014 aa21.12■□□□□ 0.97
Knop1-205ENSMUST00000116280 Chic2Q9D9G3 165 aa21.12■□□□□ 0.97
Knop1-205ENSMUST00000116280 Crybg2B7ZCC2 1516 aa21.05■□□□□ 0.96
Knop1-205ENSMUST00000116280 Phldb1Q6PDH0 1371 aaKnown RBP21.04■□□□□ 0.96
Knop1-205ENSMUST00000116280 Atad2bE9Q166 1460 aaKnown RBP21.04■□□□□ 0.96
Knop1-205ENSMUST00000116280 Ccer2J3QPU5 274 aa21.03■□□□□ 0.96
Knop1-205ENSMUST00000116280 Clstn2Q9ER65 966 aa21.03■□□□□ 0.96
Knop1-205ENSMUST00000116280 Eid3Q3V124 375 aa21.03■□□□□ 0.96
Knop1-205ENSMUST00000116280 Cux2P70298 1426 aa20.94■□□□□ 0.94
Knop1-205ENSMUST00000116280 Prdm10Q3UTQ7 1184 aa20.91■□□□□ 0.94
Knop1-205ENSMUST00000116280 Eif5bQ05D44 1216 aaKnown RBP20.87■□□□□ 0.93
Knop1-205ENSMUST00000116280 Cecr2E9Q2Z1 1453 aa20.87■□□□□ 0.93
Knop1-205ENSMUST00000116280 Eea1Q8BL66 1411 aa20.87■□□□□ 0.93
Knop1-205ENSMUST00000116280 CftrP26361 1476 aa20.86■□□□□ 0.93
Knop1-205ENSMUST00000116280 NeflP08551 543 aa20.85■□□□□ 0.93
Knop1-205ENSMUST00000116280 Nop58Q6DFW4 536 aaKnown RBP20.84■□□□□ 0.93
Knop1-205ENSMUST00000116280 Ppp1r18Q8BQ30 594 aa20.84■□□□□ 0.93
Knop1-205ENSMUST00000116280 Fmn1Q05860 1466 aa20.83■□□□□ 0.92
Knop1-205ENSMUST00000116280 P3h3Q8CG70 732 aa20.81■□□□□ 0.92
Knop1-205ENSMUST00000116280 Nlrp6Q91WS2 869 aa20.81■□□□□ 0.92
Knop1-205ENSMUST00000116280 AknaQ80VW7 1404 aa20.8■□□□□ 0.92
Knop1-205ENSMUST00000116280 Smarca4Q3TKT4 1613 aaKnown RBP20.78■□□□□ 0.92
Knop1-205ENSMUST00000116280 MyclP10166 368 aa20.7■□□□□ 0.9
Knop1-205ENSMUST00000116280 Arid3cA6PWV5 409 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms