RNA–Protein interactions for RNA: ENSMUST00000115244.8

Col19a1-202, Transcript of Collagen alpha-1(XIX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col19a1, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1-202ENSMUST00000115244 NischQ80TM9 1593 aa20.03■□□□□ 0.8
Col19a1-202ENSMUST00000115244 Rhox8Q6VSS7 320 aa19.58■□□□□ 0.72
Col19a1-202ENSMUST00000115244 Abcc9P70170 1546 aa19.28■□□□□ 0.68
Col19a1-202ENSMUST00000115244 Gm35339A0A140LHH9 1649 aa19.12■□□□□ 0.65
Col19a1-202ENSMUST00000115244 Abcc8B2RUS7 1588 aa18.84■□□□□ 0.61
Col19a1-202ENSMUST00000115244 Rtl1Q7M732 1744 aa18.42■□□□□ 0.54
Col19a1-202ENSMUST00000115244 Ccdc180J3QNE4 1664 aa18.23■□□□□ 0.51
Col19a1-202ENSMUST00000115244 Rpgrip1Q9EPQ2 1331 aa17.92■□□□□ 0.46
Col19a1-202ENSMUST00000115244 Ccdc136Q3TVA9 1136 aa17.91■□□□□ 0.46
Col19a1-202ENSMUST00000115244 HrcG5E8J6 738 aa17.65■□□□□ 0.42
Col19a1-202ENSMUST00000115244 Trim41Q5NCC3 630 aa17.64■□□□□ 0.41
Col19a1-202ENSMUST00000115244 Dcaf1Q80TR8 1506 aa17.61■□□□□ 0.41
Col19a1-202ENSMUST00000115244 Rb1cc1Q9ESK9 1588 aa17.56■□□□□ 0.4
Col19a1-202ENSMUST00000115244 Ehmt2Q9Z148 1263 aaKnown RBP17.46■□□□□ 0.39
Col19a1-202ENSMUST00000115244 Zcchc6Q5BLK4 1491 aaKnown RBP17.44■□□□□ 0.38
Col19a1-202ENSMUST00000115244 Baz1aO88379 1555 aa17.34■□□□□ 0.37
Col19a1-202ENSMUST00000115244 Acin1Q9JIX8 1338 aaKnown RBP17.33■□□□□ 0.37
Col19a1-202ENSMUST00000115244 NacadQ5SWP3 1504 aa17.31■□□□□ 0.36
Col19a1-202ENSMUST00000115244 Cngb1E1AZ71 1325 aa17.3■□□□□ 0.36
Col19a1-202ENSMUST00000115244 ScribQ80U72 1612 aa17.28■□□□□ 0.36
Col19a1-202ENSMUST00000115244 Kdm5dQ62240 1548 aa17.27■□□□□ 0.36
Col19a1-202ENSMUST00000115244 Esf1Q3V1V3 845 aaKnown RBP17.16■□□□□ 0.34
Col19a1-202ENSMUST00000115244 Gab3Q8BSM5 595 aa17.07■□□□□ 0.32
Col19a1-202ENSMUST00000115244 Crybg2B7ZCC2 1516 aa16.95■□□□□ 0.3
Col19a1-202ENSMUST00000115244 Cep164Q5DU05 1446 aa16.94■□□□□ 0.3
Col19a1-202ENSMUST00000115244 Brd4Q9ESU6 1400 aaKnown RBP16.93■□□□□ 0.3
Col19a1-202ENSMUST00000115244 Smarca2Q6DIC0 1577 aa16.8■□□□□ 0.28
Col19a1-202ENSMUST00000115244 Sycp2Q9CUU3 1500 aa16.8■□□□□ 0.28
Col19a1-202ENSMUST00000115244 Chic1Q8CBW7 227 aa16.7■□□□□ 0.26
Col19a1-202ENSMUST00000115244 NefmP08553 848 aa16.65■□□□□ 0.26
Col19a1-202ENSMUST00000115244 Golga3P55937 1487 aa16.62■□□□□ 0.25
Col19a1-202ENSMUST00000115244 Npm2Q80W85 207 aa16.61■□□□□ 0.25
Col19a1-202ENSMUST00000115244 Pcgf6Q99NA9 353 aa16.57■□□□□ 0.24
Col19a1-202ENSMUST00000115244 Myt1lP97500 1187 aa16.56■□□□□ 0.24
Col19a1-202ENSMUST00000115244 Zeb1Q64318 1117 aa16.56■□□□□ 0.24
Col19a1-202ENSMUST00000115244 Rsf1E9PWW9 1441 aaKnown RBP16.55■□□□□ 0.24
Col19a1-202ENSMUST00000115244 Cecr2E9Q2Z1 1453 aa16.47■□□□□ 0.23
Col19a1-202ENSMUST00000115244 Las1lA2BE28 776 aaKnown RBP16.46■□□□□ 0.23
Col19a1-202ENSMUST00000115244 UbtfP25976 765 aaKnown RBP16.45■□□□□ 0.22
Col19a1-202ENSMUST00000115244 Ccdc88bQ4QRL3 1481 aa16.39■□□□□ 0.21
Col19a1-202ENSMUST00000115244 Mier1Q5UAK0 511 aa16.38■□□□□ 0.21
Col19a1-202ENSMUST00000115244 CftrP26361 1476 aa16.37■□□□□ 0.21
Col19a1-202ENSMUST00000115244 Synj1Q8CHC4 1574 aa16.35■□□□□ 0.21
Col19a1-202ENSMUST00000115244 Wdr66E9Q743 1299 aa16.32■□□□□ 0.2
Col19a1-202ENSMUST00000115244 Supt5hO55201 1082 aaKnown RBP16.31■□□□□ 0.2
Col19a1-202ENSMUST00000115244 Il27Q8K3I6 234 aa16.23■□□□□ 0.19
Col19a1-202ENSMUST00000115244 Cttnbp2B9EJA2 1648 aa16.18■□□□□ 0.18
Col19a1-202ENSMUST00000115244 Smarca4Q3TKT4 1613 aaKnown RBP16.16■□□□□ 0.18
Col19a1-202ENSMUST00000115244 Fmn1Q05860 1466 aa16.16■□□□□ 0.18
Col19a1-202ENSMUST00000115244 BicraF8VPZ9 1578 aa16.16■□□□□ 0.18
Col19a1-202ENSMUST00000115244 Clip1Q922J3 1391 aa16.08■□□□□ 0.16
Col19a1-202ENSMUST00000115244 Pds5bQ4VA53 1446 aaKnown RBP16.03■□□□□ 0.16
Col19a1-202ENSMUST00000115244 Plekhg3Q4VAC9 1341 aa16.03■□□□□ 0.16
Col19a1-202ENSMUST00000115244 Cep162Q6ZQ06 1403 aa16■□□□□ 0.15
Col19a1-202ENSMUST00000115244 Atad2bE9Q166 1460 aaKnown RBP15.99■□□□□ 0.15
Col19a1-202ENSMUST00000115244 Ap3b1Q9Z1T1 1105 aa15.99■□□□□ 0.15
Col19a1-202ENSMUST00000115244 TonslQ6NZL6 1363 aa15.98■□□□□ 0.15
Col19a1-202ENSMUST00000115244 Top2bQ64511 1612 aa15.97■□□□□ 0.15
Col19a1-202ENSMUST00000115244 Rapgef2Q8CHG7 1496 aa15.96■□□□□ 0.15
Col19a1-202ENSMUST00000115244 Iqgap2Q3UQ44 1575 aa15.93■□□□□ 0.14
Col19a1-202ENSMUST00000115244 Sall2Q9QX96 1004 aa15.91■□□□□ 0.14
Col19a1-202ENSMUST00000115244 Kif15Q6P9L6 1387 aa15.9■□□□□ 0.14
Col19a1-202ENSMUST00000115244 Npm1Q61937 292 aaKnown RBP15.89■□□□□ 0.13
Col19a1-202ENSMUST00000115244 Cc2d2aQ8CFW7 1633 aa15.89■□□□□ 0.13
Col19a1-202ENSMUST00000115244 Ercc6F8VPZ5 1481 aa15.87■□□□□ 0.13
Col19a1-202ENSMUST00000115244 ClspnQ80YR7 1315 aa15.86■□□□□ 0.13
Col19a1-202ENSMUST00000115244 Top2aQ01320 1528 aaKnown RBP15.86■□□□□ 0.13
Col19a1-202ENSMUST00000115244 Cdk11bP24788 784 aaKnown RBP15.85■□□□□ 0.13
Col19a1-202ENSMUST00000115244 Ube2uB1AUC4 352 aa15.83■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Eea1Q8BL66 1411 aa15.81■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Nop58Q6DFW4 536 aaKnown RBP15.8■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Setd5Q5XJV7 1441 aa15.79■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Fam50aQ9WV03 339 aaKnown RBP15.79■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Neurod1Q60867 357 aa15.78■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Ccdc18Q640L5 1455 aa15.78■□□□□ 0.12
Col19a1-202ENSMUST00000115244 Ubl4bQ9CQ84 188 aa15.74■□□□□ 0.11
Col19a1-202ENSMUST00000115244 Ppargc1bQ8VHJ7 1014 aa15.71■□□□□ 0.11
Col19a1-202ENSMUST00000115244 Lmod2Q3UHZ5 550 aa15.69■□□□□ 0.1
Col19a1-202ENSMUST00000115244 BlmO88700 1416 aa15.66■□□□□ 0.1
Col19a1-202ENSMUST00000115244 Aebp2Q9Z248 504 aaKnown RBP15.65■□□□□ 0.1
Col19a1-202ENSMUST00000115244 Eid3Q3V124 375 aa15.63■□□□□ 0.09
Col19a1-202ENSMUST00000115244 NclP09405 707 aaKnown RBP15.62■□□□□ 0.09
Col19a1-202ENSMUST00000115244 Anks4bQ8K3X6 423 aa15.6■□□□□ 0.09
Col19a1-202ENSMUST00000115244 Stra8P70278 393 aa15.58■□□□□ 0.09
Col19a1-202ENSMUST00000115244 Frmpd1A2AKB4 1549 aa15.58■□□□□ 0.08
Col19a1-202ENSMUST00000115244 Ccer2J3QPU5 274 aa15.56■□□□□ 0.08
Col19a1-202ENSMUST00000115244 Arhgap35Q91YM2 1499 aa15.55■□□□□ 0.08
Col19a1-202ENSMUST00000115244 Phldb1Q6PDH0 1371 aaKnown RBP15.55■□□□□ 0.08
Col19a1-202ENSMUST00000115244 Shroom4Q1W617 1475 aa15.53■□□□□ 0.08
Col19a1-202ENSMUST00000115244 Wdr62Q3U3T8 1523 aa15.52■□□□□ 0.08
Col19a1-202ENSMUST00000115244 NrkQ9R0G8 1455 aa15.51■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Cux2P70298 1426 aa15.51■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Baz1bQ9Z277 1479 aa15.51■□□□□ 0.07
Col19a1-202ENSMUST00000115244 CenpbP27790 599 aa15.49■□□□□ 0.07
Col19a1-202ENSMUST00000115244 PtprkP35822 1457 aa15.47■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Map3k1P53349 1493 aa15.46■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Lamc3Q9R0B6 1581 aa15.46■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Tnnt3Q9QZ47 272 aa15.46■□□□□ 0.07
Col19a1-202ENSMUST00000115244 Carmil1Q6EDY6 1374 aa15.44■□□□□ 0.06
Col19a1-202ENSMUST00000115244 TnnQ80Z71 1560 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms