RNA–Protein interactions for RNA: ENSMUST00000114956.10

Scn3b-202, Transcript of Sodium channel subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn3b, Length 4,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3b-202ENSMUST00000114956 Rpgrip1Q9EPQ2 1331 aa15.2■□□□□ 0.02
Scn3b-202ENSMUST00000114956 Rhox8Q6VSS7 320 aa14.86□□□□□ -0.03
Scn3b-202ENSMUST00000114956 NischQ80TM9 1593 aa14.8□□□□□ -0.04
Scn3b-202ENSMUST00000114956 Acin1Q9JIX8 1338 aaKnown RBP14.49□□□□□ -0.09
Scn3b-202ENSMUST00000114956 Ehmt2Q9Z148 1263 aaKnown RBP14.41□□□□□ -0.1
Scn3b-202ENSMUST00000114956 Pcgf6Q99NA9 353 aa14.33□□□□□ -0.12
Scn3b-202ENSMUST00000114956 Abcc9P70170 1546 aa14.22□□□□□ -0.13
Scn3b-202ENSMUST00000114956 Ccdc180J3QNE4 1664 aa14.19□□□□□ -0.14
Scn3b-202ENSMUST00000114956 Las1lA2BE28 776 aaKnown RBP14.15□□□□□ -0.14
Scn3b-202ENSMUST00000114956 Rtl1Q7M732 1744 aa14.14□□□□□ -0.15
Scn3b-202ENSMUST00000114956 Gm35339A0A140LHH9 1649 aa13.97□□□□□ -0.17
Scn3b-202ENSMUST00000114956 Supt5hO55201 1082 aaKnown RBP13.89□□□□□ -0.19
Scn3b-202ENSMUST00000114956 Abcc8B2RUS7 1588 aa13.82□□□□□ -0.2
Scn3b-202ENSMUST00000114956 Neurod1Q60867 357 aa13.79□□□□□ -0.2
Scn3b-202ENSMUST00000114956 Zeb1Q64318 1117 aa13.76□□□□□ -0.21
Scn3b-202ENSMUST00000114956 HrcG5E8J6 738 aa13.72□□□□□ -0.21
Scn3b-202ENSMUST00000114956 CenpbP27790 599 aa13.68□□□□□ -0.22
Scn3b-202ENSMUST00000114956 Myt1Q8CFC2 1127 aa13.68□□□□□ -0.22
Scn3b-202ENSMUST00000114956 Dcaf1Q80TR8 1506 aa13.64□□□□□ -0.23
Scn3b-202ENSMUST00000114956 Trim41Q5NCC3 630 aa13.57□□□□□ -0.24
Scn3b-202ENSMUST00000114956 Cngb1E1AZ71 1325 aa13.57□□□□□ -0.24
Scn3b-202ENSMUST00000114956 Ccdc136Q3TVA9 1136 aa13.55□□□□□ -0.24
Scn3b-202ENSMUST00000114956 NefmP08553 848 aa13.48□□□□□ -0.25
Scn3b-202ENSMUST00000114956 1700123L14RikQ3V2K7 440 aa13.46□□□□□ -0.25
Scn3b-202ENSMUST00000114956 Wdr66E9Q743 1299 aa13.44□□□□□ -0.26
Scn3b-202ENSMUST00000114956 Csrnp3P59055 597 aa13.42□□□□□ -0.26
Scn3b-202ENSMUST00000114956 Anks4bQ8K3X6 423 aa13.41□□□□□ -0.26
Scn3b-202ENSMUST00000114956 DiexfQ8BTT6 772 aaKnown RBP13.39□□□□□ -0.27
Scn3b-202ENSMUST00000114956 Cdk11bP24788 784 aaKnown RBP13.33□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Sall2Q9QX96 1004 aa13.32□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Zcchc6Q5BLK4 1491 aaKnown RBP13.31□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Aplp2Q06335 707 aa13.27□□□□□ -0.29
Scn3b-202ENSMUST00000114956 Nop58Q6DFW4 536 aaKnown RBP13.24□□□□□ -0.29
Scn3b-202ENSMUST00000114956 Gab3Q8BSM5 595 aa13.2□□□□□ -0.3
Scn3b-202ENSMUST00000114956 Mier1Q5UAK0 511 aa13.17□□□□□ -0.3
Scn3b-202ENSMUST00000114956 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Scn3b-202ENSMUST00000114956 Ppargc1bQ8VHJ7 1014 aa13.06□□□□□ -0.32
Scn3b-202ENSMUST00000114956 Bcl11aQ9QYE3 773 aa13.03□□□□□ -0.32
Scn3b-202ENSMUST00000114956 Rb1cc1Q9ESK9 1588 aa13□□□□□ -0.33
Scn3b-202ENSMUST00000114956 ClspnQ80YR7 1315 aa13□□□□□ -0.33
Scn3b-202ENSMUST00000114956 UbtfP25976 765 aaKnown RBP12.97□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Pelp1Q9DBD5 1123 aaKnown RBP12.97□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Cep164Q5DU05 1446 aa12.96□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Tnnt3Q9QZ47 272 aa12.92□□□□□ -0.34
Scn3b-202ENSMUST00000114956 Aebp2Q9Z248 504 aaKnown RBP12.9□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Fam71e1A1L3C1 212 aa12.87□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Amer1Q7TS75 1132 aa12.85□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Esf1Q3V1V3 845 aaKnown RBP12.84□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Baz1aO88379 1555 aa12.83□□□□□ -0.35
Scn3b-202ENSMUST00000114956 TonslQ6NZL6 1363 aa12.8□□□□□ -0.36
Scn3b-202ENSMUST00000114956 Mapk8ip2Q9ERE9 830 aa12.78□□□□□ -0.36
Scn3b-202ENSMUST00000114956 Rtl5Q5DTT4 599 aa12.76□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Anp32aO35381 247 aa12.74□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Stra8P70278 393 aa12.71□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Chic1Q8CBW7 227 aa12.7□□□□□ -0.38
Scn3b-202ENSMUST00000114956 SafbD3YXK2 937 aaKnown RBP12.67□□□□□ -0.38
Scn3b-202ENSMUST00000114956 NacadQ5SWP3 1504 aa12.66□□□□□ -0.38
Scn3b-202ENSMUST00000114956 Ttbk1Q6PCN3 1308 aa12.65□□□□□ -0.38
Scn3b-202ENSMUST00000114956 Hnrnpul2Q00PI9 745 aaKnown RBP12.65□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Myt1lP97500 1187 aa12.64□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Kdm5dQ62240 1548 aa12.63□□□□□ -0.39
Scn3b-202ENSMUST00000114956 PrkcshO08795 521 aa12.62□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Brd4Q9ESU6 1400 aaKnown RBP12.61□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Ap3b1Q9Z1T1 1105 aa12.6□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Npm2Q80W85 207 aa12.54□□□□□ -0.4
Scn3b-202ENSMUST00000114956 ScribQ80U72 1612 aa12.54□□□□□ -0.4
Scn3b-202ENSMUST00000114956 Ifnlr1Q8CGK5 535 aa12.51□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Rsf1E9PWW9 1441 aaKnown RBP12.5□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Slc24a1Q91WD8 1130 aa12.49□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Crybg2B7ZCC2 1516 aa12.49□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Calr4Q3TQS0 420 aa12.46□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Smarca2Q6DIC0 1577 aa12.43□□□□□ -0.42
Scn3b-202ENSMUST00000114956 Golga3P55937 1487 aa12.43□□□□□ -0.42
Scn3b-202ENSMUST00000114956 NclP09405 707 aaKnown RBP12.4□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Eid3Q3V124 375 aa12.4□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Plekhg3Q4VAC9 1341 aa12.37□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Eif5bQ05D44 1216 aaKnown RBP12.36□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Ppp4r2Q0VGB7 417 aa12.35□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Nolc1E9Q5C9 702 aaKnown RBP12.32□□□□□ -0.44
Scn3b-202ENSMUST00000114956 4933416C03RikQ3V063 378 aa12.32□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Wdr43Q6ZQL4 677 aaKnown RBP12.31□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Supt16hQ920B9 1047 aa12.3□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Ccdc88bQ4QRL3 1481 aa12.3□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Hdac5Q9Z2V6 1113 aa12.27□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Ccdc9Q8VC31 543 aaKnown RBP12.26□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Sycp2Q9CUU3 1500 aa12.25□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Ccdc27Q3V036 639 aa12.25□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Clip1Q922J3 1391 aa12.22□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Upf2A2AT37 1269 aaKnown RBP12.21□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Znf710Q3U288 666 aa12.2□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Ube2uB1AUC4 352 aa12.2□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Hsp90aa1P07901 733 aaKnown RBP12.18□□□□□ -0.46
Scn3b-202ENSMUST00000114956 NrdcQ8BHG1 1161 aa12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Fam50aQ9WV03 339 aaKnown RBP12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Irx3P81067 507 aa12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 DaxxO35613 739 aa12.16□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Gtf3c3Q3TMP1 882 aa12.15□□□□□ -0.47
Scn3b-202ENSMUST00000114956 Cecr2E9Q2Z1 1453 aa12.11□□□□□ -0.47
Scn3b-202ENSMUST00000114956 Synj1Q8CHC4 1574 aa12.1□□□□□ -0.47
Scn3b-202ENSMUST00000114956 CftrP26361 1476 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 289.9 ms