RNA–Protein interactions for RNA: ENSMUST00000113852.4

Ssh3-202, Transcript of Protein phosphatase Slingshot homolog 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh3, Length 2,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh3-202ENSMUST00000113852 NischQ80TM9 1593 aa25.93■■□□□ 1.74
Ssh3-202ENSMUST00000113852 Gm35339A0A140LHH9 1649 aa25.42■■□□□ 1.66
Ssh3-202ENSMUST00000113852 Abcc9P70170 1546 aa25.26■■□□□ 1.63
Ssh3-202ENSMUST00000113852 Abcc8B2RUS7 1588 aa24.58■■□□□ 1.53
Ssh3-202ENSMUST00000113852 Rtl1Q7M732 1744 aa24.49■■□□□ 1.51
Ssh3-202ENSMUST00000113852 Rhox8Q6VSS7 320 aa24.22■■□□□ 1.47
Ssh3-202ENSMUST00000113852 Ccdc180J3QNE4 1664 aa24.07■■□□□ 1.44
Ssh3-202ENSMUST00000113852 Zcchc6Q5BLK4 1491 aaKnown RBP23.49■■□□□ 1.35
Ssh3-202ENSMUST00000113852 Rpgrip1Q9EPQ2 1331 aa23.41■■□□□ 1.34
Ssh3-202ENSMUST00000113852 ScribQ80U72 1612 aa23.09■■□□□ 1.29
Ssh3-202ENSMUST00000113852 Dcaf1Q80TR8 1506 aa23.04■■□□□ 1.28
Ssh3-202ENSMUST00000113852 Acin1Q9JIX8 1338 aaKnown RBP22.87■■□□□ 1.25
Ssh3-202ENSMUST00000113852 HrcG5E8J6 738 aa22.83■■□□□ 1.24
Ssh3-202ENSMUST00000113852 Rb1cc1Q9ESK9 1588 aa22.75■■□□□ 1.23
Ssh3-202ENSMUST00000113852 Kdm5dQ62240 1548 aa22.59■■□□□ 1.21
Ssh3-202ENSMUST00000113852 Baz1aO88379 1555 aa22.53■■□□□ 1.2
Ssh3-202ENSMUST00000113852 Ccdc136Q3TVA9 1136 aa22.41■■□□□ 1.18
Ssh3-202ENSMUST00000113852 Ehmt2Q9Z148 1263 aaKnown RBP22.38■■□□□ 1.17
Ssh3-202ENSMUST00000113852 NacadQ5SWP3 1504 aa22.31■■□□□ 1.16
Ssh3-202ENSMUST00000113852 Trim41Q5NCC3 630 aa22.16■■□□□ 1.14
Ssh3-202ENSMUST00000113852 Pcgf6Q99NA9 353 aa22.08■■□□□ 1.13
Ssh3-202ENSMUST00000113852 Smarca2Q6DIC0 1577 aa22.07■■□□□ 1.12
Ssh3-202ENSMUST00000113852 Crybg2B7ZCC2 1516 aa22.07■■□□□ 1.12
Ssh3-202ENSMUST00000113852 Cep164Q5DU05 1446 aa22.07■■□□□ 1.12
Ssh3-202ENSMUST00000113852 Sycp2Q9CUU3 1500 aa21.88■■□□□ 1.09
Ssh3-202ENSMUST00000113852 Rsf1E9PWW9 1441 aaKnown RBP21.61■■□□□ 1.05
Ssh3-202ENSMUST00000113852 Supt5hO55201 1082 aaKnown RBP21.61■■□□□ 1.05
Ssh3-202ENSMUST00000113852 Cecr2E9Q2Z1 1453 aa21.52■■□□□ 1.04
Ssh3-202ENSMUST00000113852 BicraF8VPZ9 1578 aa21.51■■□□□ 1.03
Ssh3-202ENSMUST00000113852 Brd4Q9ESU6 1400 aaKnown RBP21.51■■□□□ 1.03
Ssh3-202ENSMUST00000113852 Chic1Q8CBW7 227 aa21.5■■□□□ 1.03
Ssh3-202ENSMUST00000113852 Golga3P55937 1487 aa21.42■■□□□ 1.02
Ssh3-202ENSMUST00000113852 Cngb1E1AZ71 1325 aa21.41■■□□□ 1.02
Ssh3-202ENSMUST00000113852 Ccdc88bQ4QRL3 1481 aa21.4■■□□□ 1.02
Ssh3-202ENSMUST00000113852 NefmP08553 848 aa21.33■■□□□ 1.01
Ssh3-202ENSMUST00000113852 Gab3Q8BSM5 595 aa21.33■■□□□ 1
Ssh3-202ENSMUST00000113852 Synj1Q8CHC4 1574 aa21.3■■□□□ 1
Ssh3-202ENSMUST00000113852 Mier1Q5UAK0 511 aa21.22■□□□□ 0.99
Ssh3-202ENSMUST00000113852 Neurod1Q60867 357 aa21.2■□□□□ 0.98
Ssh3-202ENSMUST00000113852 Top2bQ64511 1612 aa21.18■□□□□ 0.98
Ssh3-202ENSMUST00000113852 Zeb1Q64318 1117 aa21.15■□□□□ 0.98
Ssh3-202ENSMUST00000113852 CftrP26361 1476 aa21.13■□□□□ 0.97
Ssh3-202ENSMUST00000113852 Esf1Q3V1V3 845 aaKnown RBP21.02■□□□□ 0.96
Ssh3-202ENSMUST00000113852 Cttnbp2B9EJA2 1648 aa21.02■□□□□ 0.96
Ssh3-202ENSMUST00000113852 Sall2Q9QX96 1004 aa20.99■□□□□ 0.95
Ssh3-202ENSMUST00000113852 Rapgef2Q8CHG7 1496 aa20.92■□□□□ 0.94
Ssh3-202ENSMUST00000113852 Cc2d2aQ8CFW7 1633 aa20.91■□□□□ 0.94
Ssh3-202ENSMUST00000113852 Smarca4Q3TKT4 1613 aaKnown RBP20.88■□□□□ 0.93
Ssh3-202ENSMUST00000113852 Las1lA2BE28 776 aaKnown RBP20.84■□□□□ 0.93
Ssh3-202ENSMUST00000113852 Top2aQ01320 1528 aaKnown RBP20.8■□□□□ 0.92
Ssh3-202ENSMUST00000113852 Fmn1Q05860 1466 aa20.79■□□□□ 0.92
Ssh3-202ENSMUST00000113852 Anks4bQ8K3X6 423 aa20.75■□□□□ 0.91
Ssh3-202ENSMUST00000113852 UbtfP25976 765 aaKnown RBP20.71■□□□□ 0.91
Ssh3-202ENSMUST00000113852 Cep162Q6ZQ06 1403 aa20.71■□□□□ 0.91
Ssh3-202ENSMUST00000113852 Iqgap2Q3UQ44 1575 aa20.67■□□□□ 0.9
Ssh3-202ENSMUST00000113852 Aebp2Q9Z248 504 aaKnown RBP20.64■□□□□ 0.89
Ssh3-202ENSMUST00000113852 ClspnQ80YR7 1315 aa20.6■□□□□ 0.89
Ssh3-202ENSMUST00000113852 Eif4g1Q6NZJ6 1600 aaKnown RBP20.58■□□□□ 0.88
Ssh3-202ENSMUST00000113852 Wdr66E9Q743 1299 aa20.57■□□□□ 0.88
Ssh3-202ENSMUST00000113852 Atad2bE9Q166 1460 aaKnown RBP20.53■□□□□ 0.88
Ssh3-202ENSMUST00000113852 1700123L14RikQ3V2K7 440 aa20.49■□□□□ 0.87
Ssh3-202ENSMUST00000113852 Cdk11bP24788 784 aaKnown RBP20.47■□□□□ 0.87
Ssh3-202ENSMUST00000113852 Csrnp3P59055 597 aa20.47■□□□□ 0.87
Ssh3-202ENSMUST00000113852 Myt1lP97500 1187 aa20.45■□□□□ 0.86
Ssh3-202ENSMUST00000113852 Nop58Q6DFW4 536 aaKnown RBP20.44■□□□□ 0.86
Ssh3-202ENSMUST00000113852 Ncapd3Q6ZQK0 1506 aa20.44■□□□□ 0.86
Ssh3-202ENSMUST00000113852 TonslQ6NZL6 1363 aa20.43■□□□□ 0.86
Ssh3-202ENSMUST00000113852 Clip1Q922J3 1391 aa20.42■□□□□ 0.86
Ssh3-202ENSMUST00000113852 Pds5bQ4VA53 1446 aaKnown RBP20.41■□□□□ 0.86
Ssh3-202ENSMUST00000113852 TnnQ80Z71 1560 aa20.37■□□□□ 0.85
Ssh3-202ENSMUST00000113852 Npm2Q80W85 207 aa20.34■□□□□ 0.85
Ssh3-202ENSMUST00000113852 Frmpd1A2AKB4 1549 aa20.32■□□□□ 0.84
Ssh3-202ENSMUST00000113852 Aplp2Q06335 707 aa20.3■□□□□ 0.84
Ssh3-202ENSMUST00000113852 Plekhg3Q4VAC9 1341 aa20.29■□□□□ 0.84
Ssh3-202ENSMUST00000113852 Arhgap35Q91YM2 1499 aa20.27■□□□□ 0.83
Ssh3-202ENSMUST00000113852 Wdr62Q3U3T8 1523 aa20.24■□□□□ 0.83
Ssh3-202ENSMUST00000113852 NrkQ9R0G8 1455 aa20.22■□□□□ 0.83
Ssh3-202ENSMUST00000113852 Ppargc1bQ8VHJ7 1014 aa20.22■□□□□ 0.83
Ssh3-202ENSMUST00000113852 Kdm5bQ80Y84 1544 aa20.21■□□□□ 0.83
Ssh3-202ENSMUST00000113852 Arap1Q4LDD4 1452 aa20.19■□□□□ 0.82
Ssh3-202ENSMUST00000113852 Il27Q8K3I6 234 aa20.19■□□□□ 0.82
Ssh3-202ENSMUST00000113852 Eea1Q8BL66 1411 aa20.17■□□□□ 0.82
Ssh3-202ENSMUST00000113852 Arhgef5E9Q7D5 1581 aa20.15■□□□□ 0.82
Ssh3-202ENSMUST00000113852 PtprkP35822 1457 aa20.14■□□□□ 0.81
Ssh3-202ENSMUST00000113852 Ccdc18Q640L5 1455 aa20.12■□□□□ 0.81
Ssh3-202ENSMUST00000113852 Unc13aQ4KUS2 1712 aa20.12■□□□□ 0.81
Ssh3-202ENSMUST00000113852 Kif15Q6P9L6 1387 aa20.09■□□□□ 0.81
Ssh3-202ENSMUST00000113852 Ercc6F8VPZ5 1481 aa20.08■□□□□ 0.81
Ssh3-202ENSMUST00000113852 Map3k1P53349 1493 aa20.08■□□□□ 0.81
Ssh3-202ENSMUST00000113852 TchhA0A0B4J1F9 1599 aa20.07■□□□□ 0.8
Ssh3-202ENSMUST00000113852 Lamc3Q9R0B6 1581 aa20.07■□□□□ 0.8
Ssh3-202ENSMUST00000113852 CenpbP27790 599 aa20.06■□□□□ 0.8
Ssh3-202ENSMUST00000113852 Shroom4Q1W617 1475 aa20.04■□□□□ 0.8
Ssh3-202ENSMUST00000113852 Tiam1Q60610 1591 aa20.02■□□□□ 0.8
Ssh3-202ENSMUST00000113852 Setd5Q5XJV7 1441 aa20.01■□□□□ 0.79
Ssh3-202ENSMUST00000113852 Myt1Q8CFC2 1127 aa20.01■□□□□ 0.79
Ssh3-202ENSMUST00000113852 Camsap1A2AHC3 1581 aa19.98■□□□□ 0.79
Ssh3-202ENSMUST00000113852 Erich3F6QRE9 1637 aa19.96■□□□□ 0.79
Ssh3-202ENSMUST00000113852 Baz1bQ9Z277 1479 aa19.96■□□□□ 0.79
Ssh3-202ENSMUST00000113852 Eid3Q3V124 375 aa19.92■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms