RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Rhox8Q6VSS7 320 aa18.89■□□□□ 0.61
Sptan1-204ENSMUST00000113717 Rpgrip1Q9EPQ2 1331 aa17.89■□□□□ 0.45
Sptan1-204ENSMUST00000113717 Cngb1E1AZ71 1325 aa17.41■□□□□ 0.38
Sptan1-204ENSMUST00000113717 Las1lA2BE28 776 aaKnown RBP17.36■□□□□ 0.37
Sptan1-204ENSMUST00000113717 Ehmt2Q9Z148 1263 aaKnown RBP17.24■□□□□ 0.35
Sptan1-204ENSMUST00000113717 Pelp1Q9DBD5 1123 aaKnown RBP17.04■□□□□ 0.32
Sptan1-204ENSMUST00000113717 Wdr66E9Q743 1299 aa16.95■□□□□ 0.3
Sptan1-204ENSMUST00000113717 Zeb1Q64318 1117 aa16.77■□□□□ 0.28
Sptan1-204ENSMUST00000113717 Ccdc136Q3TVA9 1136 aa16.69■□□□□ 0.26
Sptan1-204ENSMUST00000113717 Ube2uB1AUC4 352 aa16.65■□□□□ 0.26
Sptan1-204ENSMUST00000113717 Esf1Q3V1V3 845 aaKnown RBP16.62■□□□□ 0.25
Sptan1-204ENSMUST00000113717 CenpbP27790 599 aa16.45■□□□□ 0.22
Sptan1-204ENSMUST00000113717 Gab3Q8BSM5 595 aa16.45■□□□□ 0.22
Sptan1-204ENSMUST00000113717 Amer1Q7TS75 1132 aa16.43■□□□□ 0.22
Sptan1-204ENSMUST00000113717 Trim41Q5NCC3 630 aa16.38■□□□□ 0.21
Sptan1-204ENSMUST00000113717 Npm2Q80W85 207 aa16.36■□□□□ 0.21
Sptan1-204ENSMUST00000113717 Acin1Q9JIX8 1338 aaKnown RBP16.29■□□□□ 0.2
Sptan1-204ENSMUST00000113717 Stra8P70278 393 aa16.25■□□□□ 0.19
Sptan1-204ENSMUST00000113717 Myt1lP97500 1187 aa16.24■□□□□ 0.19
Sptan1-204ENSMUST00000113717 NefmP08553 848 aa16.21■□□□□ 0.19
Sptan1-204ENSMUST00000113717 Rtl1Q7M732 1744 aa16.15■□□□□ 0.18
Sptan1-204ENSMUST00000113717 Ccdc180J3QNE4 1664 aa16.13■□□□□ 0.17
Sptan1-204ENSMUST00000113717 NischQ80TM9 1593 aa16.09■□□□□ 0.17
Sptan1-204ENSMUST00000113717 UbtfP25976 765 aaKnown RBP16.02■□□□□ 0.16
Sptan1-204ENSMUST00000113717 Slc24a1Q91WD8 1130 aa16■□□□□ 0.15
Sptan1-204ENSMUST00000113717 Myt1Q8CFC2 1127 aa15.96■□□□□ 0.15
Sptan1-204ENSMUST00000113717 Cdk11bP24788 784 aaKnown RBP15.91■□□□□ 0.14
Sptan1-204ENSMUST00000113717 4930567H17RikQ3V0K5 233 aa15.9■□□□□ 0.14
Sptan1-204ENSMUST00000113717 Ttbk1Q6PCN3 1308 aa15.87■□□□□ 0.13
Sptan1-204ENSMUST00000113717 Pcgf6Q99NA9 353 aa15.81■□□□□ 0.12
Sptan1-204ENSMUST00000113717 Tnnt3Q9QZ47 272 aa15.76■□□□□ 0.11
Sptan1-204ENSMUST00000113717 4933416C03RikQ3V063 378 aa15.76■□□□□ 0.11
Sptan1-204ENSMUST00000113717 Nop58Q6DFW4 536 aaKnown RBP15.69■□□□□ 0.1
Sptan1-204ENSMUST00000113717 NrdcQ8BHG1 1161 aa15.68■□□□□ 0.1
Sptan1-204ENSMUST00000113717 HrcG5E8J6 738 aa15.67■□□□□ 0.1
Sptan1-204ENSMUST00000113717 NeflP08551 543 aa15.66■□□□□ 0.1
Sptan1-204ENSMUST00000113717 Anp32bQ9EST5 272 aaKnown RBP15.65■□□□□ 0.1
Sptan1-204ENSMUST00000113717 NclP09405 707 aaKnown RBP15.57■□□□□ 0.08
Sptan1-204ENSMUST00000113717 Eif5bQ05D44 1216 aaKnown RBP15.53■□□□□ 0.08
Sptan1-204ENSMUST00000113717 Rtl5Q5DTT4 599 aa15.51■□□□□ 0.07
Sptan1-204ENSMUST00000113717 Fam50aQ9WV03 339 aaKnown RBP15.5■□□□□ 0.07
Sptan1-204ENSMUST00000113717 Neurod1Q60867 357 aa15.46■□□□□ 0.07
Sptan1-204ENSMUST00000113717 Supt5hO55201 1082 aaKnown RBP15.44■□□□□ 0.06
Sptan1-204ENSMUST00000113717 Il27Q8K3I6 234 aa15.43■□□□□ 0.06
Sptan1-204ENSMUST00000113717 TonslQ6NZL6 1363 aa15.41■□□□□ 0.06
Sptan1-204ENSMUST00000113717 Ppargc1bQ8VHJ7 1014 aa15.39■□□□□ 0.05
Sptan1-204ENSMUST00000113717 Ap3b1Q9Z1T1 1105 aa15.35■□□□□ 0.05
Sptan1-204ENSMUST00000113717 Os9Q8K2C7 672 aa15.33■□□□□ 0.04
Sptan1-204ENSMUST00000113717 DiexfQ8BTT6 772 aaKnown RBP15.2■□□□□ 0.02
Sptan1-204ENSMUST00000113717 Mier1Q5UAK0 511 aa15.19■□□□□ 0.02
Sptan1-204ENSMUST00000113717 Zcchc6Q5BLK4 1491 aaKnown RBP15.19■□□□□ 0.02
Sptan1-204ENSMUST00000113717 Anp32aO35381 247 aa15.17■□□□□ 0.02
Sptan1-204ENSMUST00000113717 DaxxO35613 739 aa15.14■□□□□ 0.01
Sptan1-204ENSMUST00000113717 ClspnQ80YR7 1315 aa15.14■□□□□ 0.01
Sptan1-204ENSMUST00000113717 Plekhg3Q4VAC9 1341 aa14.9□□□□□ -0.02
Sptan1-204ENSMUST00000113717 Anks4bQ8K3X6 423 aa14.88□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Zbtb7cQ8VCZ7 619 aa14.88□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Gm35339A0A140LHH9 1649 aa14.86□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Lmod2Q3UHZ5 550 aa14.86□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Nlrp6Q91WS2 869 aa14.86□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Hnrnpul2Q00PI9 745 aaKnown RBP14.85□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Abcc9P70170 1546 aa14.84□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Csrnp3P59055 597 aa14.84□□□□□ -0.03
Sptan1-204ENSMUST00000113717 Aplp2Q06335 707 aa14.8□□□□□ -0.04
Sptan1-204ENSMUST00000113717 Gm38655A0A286YDK6 273 aa14.79□□□□□ -0.04
Sptan1-204ENSMUST00000113717 Mapk8ip2Q9ERE9 830 aa14.79□□□□□ -0.04
Sptan1-204ENSMUST00000113717 Polr3glQ8R0C0 218 aa14.79□□□□□ -0.04
Sptan1-204ENSMUST00000113717 ArxO35085 564 aa14.77□□□□□ -0.04
Sptan1-204ENSMUST00000113717 Chic1Q8CBW7 227 aa14.76□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Zbtb4Q5F293 982 aa14.76□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Npm1Q61937 292 aaKnown RBP14.74□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Sall2Q9QX96 1004 aa14.74□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Calr4Q3TQS0 420 aa14.73□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Eid3Q3V124 375 aa14.72□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Hdac5Q9Z2V6 1113 aa14.72□□□□□ -0.05
Sptan1-204ENSMUST00000113717 Dcaf1Q80TR8 1506 aa14.71□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Ppp4r2Q0VGB7 417 aa14.71□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Gm13697A2AK42 830 aa14.7□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Erich6D3Z6S9 713 aa14.69□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Atp1b4Q99ME6 356 aa14.66□□□□□ -0.06
Sptan1-204ENSMUST00000113717 CatipB9EKE5 520 aa14.66□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Upf2A2AT37 1269 aaKnown RBP14.66□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Prdm10Q3UTQ7 1184 aa14.65□□□□□ -0.06
Sptan1-204ENSMUST00000113717 Ccdc9Q8VC31 543 aaKnown RBP14.62□□□□□ -0.07
Sptan1-204ENSMUST00000113717 Ccer2J3QPU5 274 aa14.62□□□□□ -0.07
Sptan1-204ENSMUST00000113717 Clip1Q922J3 1391 aa14.61□□□□□ -0.07
Sptan1-204ENSMUST00000113717 Wdr43Q6ZQL4 677 aaKnown RBP14.6□□□□□ -0.07
Sptan1-204ENSMUST00000113717 Hsp90aa1P07901 733 aaKnown RBP14.6□□□□□ -0.07
Sptan1-204ENSMUST00000113717 Cep164Q5DU05 1446 aa14.56□□□□□ -0.08
Sptan1-204ENSMUST00000113717 Ifnlr1Q8CGK5 535 aa14.51□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Lmod3E9QA62 571 aa14.51□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Gm13695A2AK44 830 aa14.5□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Ythdc1E9Q5K9 736 aaKnown RBP14.5□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Brd4Q9ESU6 1400 aaKnown RBP14.5□□□□□ -0.09
Sptan1-204ENSMUST00000113717 DekQ7TNV0 380 aaKnown RBP14.49□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Trim44Q9QXA7 346 aa14.48□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Rad21Q61550 635 aaKnown RBP14.48□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Rangap1P46061 589 aaKnown RBP14.47□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Mrs2Q5NCE8 434 aa14.46□□□□□ -0.09
Sptan1-204ENSMUST00000113717 Vsig10D3YX43 558 aa14.38□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms