RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Mapk8ip2Q9ERE9 830 aa18.9■□□□□ 0.62
Nck1-201ENSMUST00000112874 Chic1Q8CBW7 227 aa17.89■□□□□ 0.45
Nck1-201ENSMUST00000112874 Phf23Q8BSN5 401 aa16.04■□□□□ 0.16
Nck1-201ENSMUST00000112874 GapdhsQ64467 440 aa15.78■□□□□ 0.12
Nck1-201ENSMUST00000112874 Gab3Q8BSM5 595 aa14.85□□□□□ -0.03
Nck1-201ENSMUST00000112874 Fam163aQ8CAA5 168 aa14.51□□□□□ -0.09
Nck1-201ENSMUST00000112874 Plppr3Q7TPB0 716 aa14.48□□□□□ -0.09
Nck1-201ENSMUST00000112874 Senp3Q9EP97 568 aaKnown RBP14.17□□□□□ -0.14
Nck1-201ENSMUST00000112874 Ube2uB1AUC4 352 aa13.16□□□□□ -0.3
Nck1-201ENSMUST00000112874 ArsiQ32KI9 573 aa13.02□□□□□ -0.33
Nck1-201ENSMUST00000112874 Slc34a2Q9DBP0 697 aa13.01□□□□□ -0.33
Nck1-201ENSMUST00000112874 Hoxd11P23813 323 aa12.93□□□□□ -0.34
Nck1-201ENSMUST00000112874 DiexfQ8BTT6 772 aaKnown RBP12.7□□□□□ -0.38
Nck1-201ENSMUST00000112874 Znf219Q6IQX8 726 aa12.61□□□□□ -0.39
Nck1-201ENSMUST00000112874 Kcna4Q61423 654 aa12.51□□□□□ -0.41
Nck1-201ENSMUST00000112874 Trap1aP19473 224 aa12.49□□□□□ -0.41
Nck1-201ENSMUST00000112874 CatipB9EKE5 520 aa12.32□□□□□ -0.44
Nck1-201ENSMUST00000112874 Dnajc5bQ9CQ94 199 aa12.15□□□□□ -0.46
Nck1-201ENSMUST00000112874 Ttbk1Q6PCN3 1308 aa12.12□□□□□ -0.47
Nck1-201ENSMUST00000112874 Akt1s1Q9D1F4 257 aa12.01□□□□□ -0.49
Nck1-201ENSMUST00000112874 Chrna2Q91X60 512 aa11.96□□□□□ -0.5
Nck1-201ENSMUST00000112874 Rsph4aQ8BYM7 716 aa11.93□□□□□ -0.5
Nck1-201ENSMUST00000112874 Rimbp2Q80U40 1072 aa11.89□□□□□ -0.51
Nck1-201ENSMUST00000112874 Cacnb1Q8R3Z5 597 aa11.87□□□□□ -0.51
Nck1-201ENSMUST00000112874 Ehmt2Q9Z148 1263 aaKnown RBP11.81□□□□□ -0.52
Nck1-201ENSMUST00000112874 ArxO35085 564 aa11.8□□□□□ -0.52
Nck1-201ENSMUST00000112874 Rhox8Q6VSS7 320 aa11.74□□□□□ -0.53
Nck1-201ENSMUST00000112874 Znf704Q9ERQ3 566 aa11.65□□□□□ -0.55
Nck1-201ENSMUST00000112874 Slc4a5E9Q3M5 1116 aa11.62□□□□□ -0.55
Nck1-201ENSMUST00000112874 Amer1Q7TS75 1132 aa11.47□□□□□ -0.57
Nck1-201ENSMUST00000112874 Myt1Q8CFC2 1127 aa11.4□□□□□ -0.59
Nck1-201ENSMUST00000112874 Aplp2Q06335 707 aa11.33□□□□□ -0.6
Nck1-201ENSMUST00000112874 Bcl11aQ9QYE3 773 aa11.3□□□□□ -0.6
Nck1-201ENSMUST00000112874 Vsig10D3YX43 558 aa11.1□□□□□ -0.63
Nck1-201ENSMUST00000112874 Slc4a1apE9PX68 744 aa11.09□□□□□ -0.63
Nck1-201ENSMUST00000112874 Dmrt2Q8BG36 561 aa11.09□□□□□ -0.63
Nck1-201ENSMUST00000112874 Arid3aQ62431 601 aa11.09□□□□□ -0.63
Nck1-201ENSMUST00000112874 Ildr2B5TVM2 661 aa11.05□□□□□ -0.64
Nck1-201ENSMUST00000112874 Ppargc1bQ8VHJ7 1014 aa11.04□□□□□ -0.64
Nck1-201ENSMUST00000112874 Znf703P0CL69 594 aa11.03□□□□□ -0.64
Nck1-201ENSMUST00000112874 Taok2Q6ZQ29 1240 aa11.02□□□□□ -0.65
Nck1-201ENSMUST00000112874 Ncbp3Q8BZR9 615 aaKnown RBP11.02□□□□□ -0.65
Nck1-201ENSMUST00000112874 UbtfP25976 765 aaKnown RBP11.01□□□□□ -0.65
Nck1-201ENSMUST00000112874 Q8BT18 775 aa10.94□□□□□ -0.66
Nck1-201ENSMUST00000112874 Gtf3c5Q8R2T8 520 aa10.94□□□□□ -0.66
Nck1-201ENSMUST00000112874 Atf5O70191 283 aa10.91□□□□□ -0.66
Nck1-201ENSMUST00000112874 4930567H17RikQ3V0K5 233 aa10.91□□□□□ -0.66
Nck1-201ENSMUST00000112874 Prdm16A2A935 1275 aa10.9□□□□□ -0.66
Nck1-201ENSMUST00000112874 BccipQ9CWI3 316 aa10.9□□□□□ -0.66
Nck1-201ENSMUST00000112874 Pelp1Q9DBD5 1123 aaKnown RBP10.86□□□□□ -0.67
Nck1-201ENSMUST00000112874 Sox12Q04890 314 aa10.85□□□□□ -0.67
Nck1-201ENSMUST00000112874 A0A1Y7VJH8 109 aa10.82□□□□□ -0.68
Nck1-201ENSMUST00000112874 Bach1P97302 739 aa10.81□□□□□ -0.68
Nck1-201ENSMUST00000112874 Ppp4r2Q0VGB7 417 aa10.8□□□□□ -0.68
Nck1-201ENSMUST00000112874 Hs6st3Q9QYK4 470 aa10.8□□□□□ -0.68
Nck1-201ENSMUST00000112874 CenpbP27790 599 aa10.78□□□□□ -0.68
Nck1-201ENSMUST00000112874 TimelessQ9R1X4 1197 aa10.78□□□□□ -0.68
Nck1-201ENSMUST00000112874 Prdm10Q3UTQ7 1184 aa10.76□□□□□ -0.69
Nck1-201ENSMUST00000112874 Fam71e1A1L3C1 212 aa10.74□□□□□ -0.69
Nck1-201ENSMUST00000112874 Evx2P49749 475 aa10.65□□□□□ -0.7
Nck1-201ENSMUST00000112874 Eif5bQ05D44 1216 aaKnown RBP10.65□□□□□ -0.7
Nck1-201ENSMUST00000112874 Prr29B1ARI9 187 aa10.63□□□□□ -0.71
Nck1-201ENSMUST00000112874 Ripply1Q2WG77 201 aa10.62□□□□□ -0.71
Nck1-201ENSMUST00000112874 Cdk11bP24788 784 aaKnown RBP10.61□□□□□ -0.71
Nck1-201ENSMUST00000112874 Grwd1Q810D6 446 aaKnown RBP10.61□□□□□ -0.71
Nck1-201ENSMUST00000112874 Egfem1Q8C088 590 aa10.61□□□□□ -0.71
Nck1-201ENSMUST00000112874 Krtap4-1Q3UUY3 169 aa10.59□□□□□ -0.71
Nck1-201ENSMUST00000112874 Kcnn1Q9EQR3 537 aa10.56□□□□□ -0.72
Nck1-201ENSMUST00000112874 Npm2Q80W85 207 aa10.54□□□□□ -0.72
Nck1-201ENSMUST00000112874 Pcgf6Q99NA9 353 aa10.53□□□□□ -0.72
Nck1-201ENSMUST00000112874 HrcG5E8J6 738 aa10.52□□□□□ -0.73
Nck1-201ENSMUST00000112874 Zbtb7aO88939 569 aaKnown RBP10.52□□□□□ -0.73
Nck1-201ENSMUST00000112874 Znf326O88291 580 aa10.51□□□□□ -0.73
Nck1-201ENSMUST00000112874 PrkcshO08795 521 aa10.5□□□□□ -0.73
Nck1-201ENSMUST00000112874 Ube2q2Q8K2Z8 378 aa10.49□□□□□ -0.73
Nck1-201ENSMUST00000112874 Znf316Q6PGE4 1016 aa10.47□□□□□ -0.73
Nck1-201ENSMUST00000112874 Os9Q8K2C7 672 aa10.45□□□□□ -0.74
Nck1-201ENSMUST00000112874 Pknox2Q8BG99 474 aa10.43□□□□□ -0.74
Nck1-201ENSMUST00000112874 WdpcpQ8C456 722 aa10.38□□□□□ -0.75
Nck1-201ENSMUST00000112874 Zbtb7cQ8VCZ7 619 aa10.38□□□□□ -0.75
Nck1-201ENSMUST00000112874 Krtap28-10A0A1Y7VP58 119 aa10.37□□□□□ -0.75
Nck1-201ENSMUST00000112874 Ecm2Q5FW85 670 aa10.36□□□□□ -0.75
Nck1-201ENSMUST00000112874 Abcb7Q61102 752 aaKnown RBP10.34□□□□□ -0.75
Nck1-201ENSMUST00000112874 Scaf1Q5U4C3 1256 aaKnown RBP10.33□□□□□ -0.76
Nck1-201ENSMUST00000112874 Ifnlr1Q8CGK5 535 aa10.33□□□□□ -0.76
Nck1-201ENSMUST00000112874 Fbxo3Q9DC63 480 aa10.33□□□□□ -0.76
Nck1-201ENSMUST00000112874 Rpgrip1Q9EPQ2 1331 aa10.31□□□□□ -0.76
Nck1-201ENSMUST00000112874 Pip4p2Q9CZX7 257 aa10.3□□□□□ -0.76
Nck1-201ENSMUST00000112874 Las1lA2BE28 776 aaKnown RBP10.28□□□□□ -0.76
Nck1-201ENSMUST00000112874 NclP09405 707 aaKnown RBP10.28□□□□□ -0.76
Nck1-201ENSMUST00000112874 4933416C03RikQ3V063 378 aa10.28□□□□□ -0.76
Nck1-201ENSMUST00000112874 NrdcQ8BHG1 1161 aa10.24□□□□□ -0.77
Nck1-201ENSMUST00000112874 G430095P16RikE9Q913 147 aa10.21□□□□□ -0.78
Nck1-201ENSMUST00000112874 A0A1Y7VLE6 161 aa10.2□□□□□ -0.78
Nck1-201ENSMUST00000112874 Igsf3Q6ZQA6 1194 aa10.17□□□□□ -0.78
Nck1-201ENSMUST00000112874 Fgd1P52734 960 aa10.17□□□□□ -0.78
Nck1-201ENSMUST00000112874 1700123L14RikQ3V2K7 440 aa10.17□□□□□ -0.78
Nck1-201ENSMUST00000112874 Ythdc1E9Q5K9 736 aaKnown RBP10.16□□□□□ -0.78
Nck1-201ENSMUST00000112874 Rnf216P58283 853 aa10.16□□□□□ -0.78
Nck1-201ENSMUST00000112874 Cnksr2Q80YA9 1032 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 311 ms