RNA–Protein interactions for RNA: ENSMUST00000111377.7

Lmx1a-202, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lmx1a, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-202ENSMUST00000111377 Rhox8Q6VSS7 320 aa15.7■□□□□ 0.1
Lmx1a-202ENSMUST00000111377 NischQ80TM9 1593 aa15.59■□□□□ 0.09
Lmx1a-202ENSMUST00000111377 Gm35339A0A140LHH9 1649 aa15.49■□□□□ 0.07
Lmx1a-202ENSMUST00000111377 Rpgrip1Q9EPQ2 1331 aa15.21■□□□□ 0.03
Lmx1a-202ENSMUST00000111377 Myt1Q8CFC2 1127 aa14.97□□□□□ -0.01
Lmx1a-202ENSMUST00000111377 Abcc9P70170 1546 aa14.96□□□□□ -0.02
Lmx1a-202ENSMUST00000111377 Ehmt2Q9Z148 1263 aaKnown RBP14.94□□□□□ -0.02
Lmx1a-202ENSMUST00000111377 Pcgf6Q99NA9 353 aa14.6□□□□□ -0.07
Lmx1a-202ENSMUST00000111377 Abcc8B2RUS7 1588 aa14.57□□□□□ -0.08
Lmx1a-202ENSMUST00000111377 Ccdc180J3QNE4 1664 aa14.55□□□□□ -0.08
Lmx1a-202ENSMUST00000111377 Rtl1Q7M732 1744 aa14.53□□□□□ -0.08
Lmx1a-202ENSMUST00000111377 DiexfQ8BTT6 772 aaKnown RBP14.51□□□□□ -0.09
Lmx1a-202ENSMUST00000111377 Ccdc136Q3TVA9 1136 aa14.48□□□□□ -0.09
Lmx1a-202ENSMUST00000111377 Acin1Q9JIX8 1338 aaKnown RBP14.43□□□□□ -0.1
Lmx1a-202ENSMUST00000111377 CenpbP27790 599 aa14.29□□□□□ -0.12
Lmx1a-202ENSMUST00000111377 CatipB9EKE5 520 aa14.22□□□□□ -0.13
Lmx1a-202ENSMUST00000111377 Las1lA2BE28 776 aaKnown RBP14.17□□□□□ -0.14
Lmx1a-202ENSMUST00000111377 Trim41Q5NCC3 630 aa14.11□□□□□ -0.15
Lmx1a-202ENSMUST00000111377 Bcl11aQ9QYE3 773 aa14.08□□□□□ -0.16
Lmx1a-202ENSMUST00000111377 Zcchc6Q5BLK4 1491 aaKnown RBP14.06□□□□□ -0.16
Lmx1a-202ENSMUST00000111377 HrcG5E8J6 738 aa14.02□□□□□ -0.16
Lmx1a-202ENSMUST00000111377 Supt5hO55201 1082 aaKnown RBP13.96□□□□□ -0.18
Lmx1a-202ENSMUST00000111377 Zeb1Q64318 1117 aa13.96□□□□□ -0.18
Lmx1a-202ENSMUST00000111377 Gab3Q8BSM5 595 aa13.95□□□□□ -0.18
Lmx1a-202ENSMUST00000111377 Amer1Q7TS75 1132 aa13.94□□□□□ -0.18
Lmx1a-202ENSMUST00000111377 Cngb1E1AZ71 1325 aa13.84□□□□□ -0.19
Lmx1a-202ENSMUST00000111377 Dcaf1Q80TR8 1506 aa13.83□□□□□ -0.2
Lmx1a-202ENSMUST00000111377 ScribQ80U72 1612 aa13.72□□□□□ -0.21
Lmx1a-202ENSMUST00000111377 Rb1cc1Q9ESK9 1588 aa13.71□□□□□ -0.22
Lmx1a-202ENSMUST00000111377 1700123L14RikQ3V2K7 440 aa13.67□□□□□ -0.22
Lmx1a-202ENSMUST00000111377 Neurod1Q60867 357 aa13.66□□□□□ -0.22
Lmx1a-202ENSMUST00000111377 Wdr66E9Q743 1299 aa13.58□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 Chic1Q8CBW7 227 aa13.56□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 Ppargc1bQ8VHJ7 1014 aa13.56□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 PrkcshO08795 521 aa13.54□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 Aplp2Q06335 707 aa13.54□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 Mier1Q5UAK0 511 aa13.53□□□□□ -0.24
Lmx1a-202ENSMUST00000111377 Cep164Q5DU05 1446 aa13.48□□□□□ -0.25
Lmx1a-202ENSMUST00000111377 UbtfP25976 765 aaKnown RBP13.48□□□□□ -0.25
Lmx1a-202ENSMUST00000111377 Esf1Q3V1V3 845 aaKnown RBP13.48□□□□□ -0.25
Lmx1a-202ENSMUST00000111377 Sall2Q9QX96 1004 aa13.47□□□□□ -0.25
Lmx1a-202ENSMUST00000111377 NefmP08553 848 aa13.44□□□□□ -0.26
Lmx1a-202ENSMUST00000111377 Baz1aO88379 1555 aa13.43□□□□□ -0.26
Lmx1a-202ENSMUST00000111377 Anks4bQ8K3X6 423 aa13.41□□□□□ -0.26
Lmx1a-202ENSMUST00000111377 Myt1lP97500 1187 aa13.37□□□□□ -0.27
Lmx1a-202ENSMUST00000111377 Kdm5dQ62240 1548 aa13.36□□□□□ -0.27
Lmx1a-202ENSMUST00000111377 NacadQ5SWP3 1504 aa13.33□□□□□ -0.27
Lmx1a-202ENSMUST00000111377 Rsf1E9PWW9 1441 aaKnown RBP13.33□□□□□ -0.28
Lmx1a-202ENSMUST00000111377 Ube2uB1AUC4 352 aa13.3□□□□□ -0.28
Lmx1a-202ENSMUST00000111377 Csrnp3P59055 597 aa13.3□□□□□ -0.28
Lmx1a-202ENSMUST00000111377 NrdcQ8BHG1 1161 aa13.3□□□□□ -0.28
Lmx1a-202ENSMUST00000111377 Fgd1P52734 960 aa13.29□□□□□ -0.28
Lmx1a-202ENSMUST00000111377 Gm38655A0A286YDK6 273 aa13.25□□□□□ -0.29
Lmx1a-202ENSMUST00000111377 Aebp2Q9Z248 504 aaKnown RBP13.23□□□□□ -0.29
Lmx1a-202ENSMUST00000111377 Cdk11bP24788 784 aaKnown RBP13.2□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 Ccdc88bQ4QRL3 1481 aa13.2□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 Pknox2Q8BG99 474 aa13.2□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 BccipQ9CWI3 316 aa13.2□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 Nop58Q6DFW4 536 aaKnown RBP13.18□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 Npm2Q80W85 207 aa13.16□□□□□ -0.3
Lmx1a-202ENSMUST00000111377 Plppr3Q7TPB0 716 aa13.13□□□□□ -0.31
Lmx1a-202ENSMUST00000111377 Gtf3c5Q8R2T8 520 aa13.13□□□□□ -0.31
Lmx1a-202ENSMUST00000111377 Smarca2Q6DIC0 1577 aa13.09□□□□□ -0.31
Lmx1a-202ENSMUST00000111377 Plekhg3Q4VAC9 1341 aa13.07□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 Ttbk1Q6PCN3 1308 aa13.07□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 Brd4Q9ESU6 1400 aaKnown RBP13.06□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 Sycp2Q9CUU3 1500 aa13.05□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 Crybg2B7ZCC2 1516 aa13.03□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 Golga3P55937 1487 aa13.02□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 ClspnQ80YR7 1315 aa13.02□□□□□ -0.32
Lmx1a-202ENSMUST00000111377 TonslQ6NZL6 1363 aa13.02□□□□□ -0.33
Lmx1a-202ENSMUST00000111377 Cecr2E9Q2Z1 1453 aa13□□□□□ -0.33
Lmx1a-202ENSMUST00000111377 Ap3b1Q9Z1T1 1105 aa13□□□□□ -0.33
Lmx1a-202ENSMUST00000111377 Mapk8ip2Q9ERE9 830 aa12.98□□□□□ -0.33
Lmx1a-202ENSMUST00000111377 Eid3Q3V124 375 aa12.98□□□□□ -0.33
Lmx1a-202ENSMUST00000111377 Rtl5Q5DTT4 599 aa12.95□□□□□ -0.34
Lmx1a-202ENSMUST00000111377 Hdac5Q9Z2V6 1113 aa12.89□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 Il27Q8K3I6 234 aa12.88□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 Znf316Q6PGE4 1016 aa12.87□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 Synj1Q8CHC4 1574 aa12.87□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 Ifnlr1Q8CGK5 535 aa12.84□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 TimelessQ9R1X4 1197 aa12.84□□□□□ -0.35
Lmx1a-202ENSMUST00000111377 Scaf1Q5U4C3 1256 aaKnown RBP12.83□□□□□ -0.36
Lmx1a-202ENSMUST00000111377 Clip1Q922J3 1391 aa12.82□□□□□ -0.36
Lmx1a-202ENSMUST00000111377 BicraF8VPZ9 1578 aa12.8□□□□□ -0.36
Lmx1a-202ENSMUST00000111377 Slc24a1Q91WD8 1130 aa12.79□□□□□ -0.36
Lmx1a-202ENSMUST00000111377 SafbD3YXK2 937 aaKnown RBP12.78□□□□□ -0.36
Lmx1a-202ENSMUST00000111377 Fam50aQ9WV03 339 aaKnown RBP12.75□□□□□ -0.37
Lmx1a-202ENSMUST00000111377 Ccdc9Q8VC31 543 aaKnown RBP12.73□□□□□ -0.37
Lmx1a-202ENSMUST00000111377 Hnrnpul2Q00PI9 745 aaKnown RBP12.73□□□□□ -0.37
Lmx1a-202ENSMUST00000111377 CftrP26361 1476 aa12.73□□□□□ -0.37
Lmx1a-202ENSMUST00000111377 NclP09405 707 aaKnown RBP12.7□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Cep162Q6ZQ06 1403 aa12.7□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Rapgef2Q8CHG7 1496 aa12.69□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Lmod2Q3UHZ5 550 aa12.67□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Cc2d2aQ8CFW7 1633 aa12.67□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 ArxO35085 564 aa12.67□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Fam71e1A1L3C1 212 aa12.66□□□□□ -0.38
Lmx1a-202ENSMUST00000111377 Gtf3c3Q3TMP1 882 aa12.6□□□□□ -0.39
Lmx1a-202ENSMUST00000111377 Baz1bQ9Z277 1479 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms