RNA–Protein interactions for RNA: ENSMUST00000110808.1

Ino80-202, Transcript of DNA helicase INO80, mousemouse

TSL 1 (best) BASIC

Gene Ino80, Length 3,928 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80-202ENSMUST00000110808 Rhox8Q6VSS7 320 aa26.07■■□□□ 1.76
Ino80-202ENSMUST00000110808 NischQ80TM9 1593 aa25.27■■□□□ 1.64
Ino80-202ENSMUST00000110808 Abcc9P70170 1546 aa24.01■■□□□ 1.43
Ino80-202ENSMUST00000110808 Ccdc136Q3TVA9 1136 aa23.81■■□□□ 1.4
Ino80-202ENSMUST00000110808 Ehmt2Q9Z148 1263 aaKnown RBP23.63■■□□□ 1.37
Ino80-202ENSMUST00000110808 Abcc8B2RUS7 1588 aa23.56■■□□□ 1.36
Ino80-202ENSMUST00000110808 Gm35339A0A140LHH9 1649 aa23.25■■□□□ 1.31
Ino80-202ENSMUST00000110808 Trim41Q5NCC3 630 aa23.02■■□□□ 1.27
Ino80-202ENSMUST00000110808 Rpgrip1Q9EPQ2 1331 aa23■■□□□ 1.27
Ino80-202ENSMUST00000110808 Cngb1E1AZ71 1325 aa22.99■■□□□ 1.27
Ino80-202ENSMUST00000110808 Ccdc180J3QNE4 1664 aa22.88■■□□□ 1.25
Ino80-202ENSMUST00000110808 Gab3Q8BSM5 595 aa22.86■■□□□ 1.25
Ino80-202ENSMUST00000110808 Esf1Q3V1V3 845 aaKnown RBP22.8■■□□□ 1.24
Ino80-202ENSMUST00000110808 Rtl1Q7M732 1744 aa22.77■■□□□ 1.24
Ino80-202ENSMUST00000110808 Zcchc6Q5BLK4 1491 aaKnown RBP22.56■■□□□ 1.2
Ino80-202ENSMUST00000110808 HrcG5E8J6 738 aa22.55■■□□□ 1.2
Ino80-202ENSMUST00000110808 Acin1Q9JIX8 1338 aaKnown RBP22.43■■□□□ 1.18
Ino80-202ENSMUST00000110808 Myt1lP97500 1187 aa22.19■■□□□ 1.14
Ino80-202ENSMUST00000110808 Zeb1Q64318 1117 aa22.19■■□□□ 1.14
Ino80-202ENSMUST00000110808 Rb1cc1Q9ESK9 1588 aa22.15■■□□□ 1.14
Ino80-202ENSMUST00000110808 Npm2Q80W85 207 aa22.1■■□□□ 1.13
Ino80-202ENSMUST00000110808 Dcaf1Q80TR8 1506 aa21.98■■□□□ 1.11
Ino80-202ENSMUST00000110808 UbtfP25976 765 aaKnown RBP21.9■■□□□ 1.1
Ino80-202ENSMUST00000110808 Wdr66E9Q743 1299 aa21.87■■□□□ 1.09
Ino80-202ENSMUST00000110808 Chic1Q8CBW7 227 aa21.79■■□□□ 1.08
Ino80-202ENSMUST00000110808 Il27Q8K3I6 234 aa21.74■■□□□ 1.07
Ino80-202ENSMUST00000110808 NacadQ5SWP3 1504 aa21.74■■□□□ 1.07
Ino80-202ENSMUST00000110808 Las1lA2BE28 776 aaKnown RBP21.73■■□□□ 1.07
Ino80-202ENSMUST00000110808 Kdm5dQ62240 1548 aa21.72■■□□□ 1.07
Ino80-202ENSMUST00000110808 Baz1aO88379 1555 aa21.72■■□□□ 1.07
Ino80-202ENSMUST00000110808 Pcgf6Q99NA9 353 aa21.69■■□□□ 1.06
Ino80-202ENSMUST00000110808 NefmP08553 848 aa21.6■■□□□ 1.05
Ino80-202ENSMUST00000110808 Cep164Q5DU05 1446 aa21.53■■□□□ 1.04
Ino80-202ENSMUST00000110808 ScribQ80U72 1612 aa21.53■■□□□ 1.04
Ino80-202ENSMUST00000110808 Brd4Q9ESU6 1400 aaKnown RBP21.53■■□□□ 1.04
Ino80-202ENSMUST00000110808 Supt5hO55201 1082 aaKnown RBP21.48■■□□□ 1.03
Ino80-202ENSMUST00000110808 Mier1Q5UAK0 511 aa21.45■■□□□ 1.02
Ino80-202ENSMUST00000110808 Ube2uB1AUC4 352 aa21.41■■□□□ 1.02
Ino80-202ENSMUST00000110808 Ap3b1Q9Z1T1 1105 aa21.41■■□□□ 1.02
Ino80-202ENSMUST00000110808 Ppargc1bQ8VHJ7 1014 aa21.34■■□□□ 1.01
Ino80-202ENSMUST00000110808 Plekhg3Q4VAC9 1341 aa21.22■□□□□ 0.99
Ino80-202ENSMUST00000110808 Rsf1E9PWW9 1441 aaKnown RBP21.21■□□□□ 0.99
Ino80-202ENSMUST00000110808 Golga3P55937 1487 aa21.12■□□□□ 0.97
Ino80-202ENSMUST00000110808 Fam50aQ9WV03 339 aaKnown RBP21.06■□□□□ 0.96
Ino80-202ENSMUST00000110808 Sycp2Q9CUU3 1500 aa21.05■□□□□ 0.96
Ino80-202ENSMUST00000110808 Ccdc88bQ4QRL3 1481 aa21.02■□□□□ 0.96
Ino80-202ENSMUST00000110808 Cecr2E9Q2Z1 1453 aa20.99■□□□□ 0.95
Ino80-202ENSMUST00000110808 Smarca2Q6DIC0 1577 aa20.93■□□□□ 0.94
Ino80-202ENSMUST00000110808 Lmod2Q3UHZ5 550 aa20.93■□□□□ 0.94
Ino80-202ENSMUST00000110808 TonslQ6NZL6 1363 aa20.91■□□□□ 0.94
Ino80-202ENSMUST00000110808 Clip1Q922J3 1391 aa20.9■□□□□ 0.94
Ino80-202ENSMUST00000110808 Crybg2B7ZCC2 1516 aa20.89■□□□□ 0.93
Ino80-202ENSMUST00000110808 Npm1Q61937 292 aaKnown RBP20.89■□□□□ 0.93
Ino80-202ENSMUST00000110808 Sall2Q9QX96 1004 aa20.88■□□□□ 0.93
Ino80-202ENSMUST00000110808 Cdk11bP24788 784 aaKnown RBP20.85■□□□□ 0.93
Ino80-202ENSMUST00000110808 Eid3Q3V124 375 aa20.85■□□□□ 0.93
Ino80-202ENSMUST00000110808 Nop58Q6DFW4 536 aaKnown RBP20.81■□□□□ 0.92
Ino80-202ENSMUST00000110808 NclP09405 707 aaKnown RBP20.72■□□□□ 0.91
Ino80-202ENSMUST00000110808 Slc24a1Q91WD8 1130 aa20.72■□□□□ 0.91
Ino80-202ENSMUST00000110808 Neurod1Q60867 357 aa20.71■□□□□ 0.91
Ino80-202ENSMUST00000110808 CftrP26361 1476 aa20.7■□□□□ 0.9
Ino80-202ENSMUST00000110808 Synj1Q8CHC4 1574 aa20.66■□□□□ 0.9
Ino80-202ENSMUST00000110808 Ubl4bQ9CQ84 188 aa20.65■□□□□ 0.9
Ino80-202ENSMUST00000110808 Mapk8ip2Q9ERE9 830 aa20.6■□□□□ 0.89
Ino80-202ENSMUST00000110808 ClspnQ80YR7 1315 aa20.59■□□□□ 0.89
Ino80-202ENSMUST00000110808 Kif15Q6P9L6 1387 aa20.59■□□□□ 0.89
Ino80-202ENSMUST00000110808 CenpbP27790 599 aa20.56■□□□□ 0.88
Ino80-202ENSMUST00000110808 Aebp2Q9Z248 504 aaKnown RBP20.56■□□□□ 0.88
Ino80-202ENSMUST00000110808 Setd5Q5XJV7 1441 aa20.49■□□□□ 0.87
Ino80-202ENSMUST00000110808 Cep162Q6ZQ06 1403 aa20.44■□□□□ 0.86
Ino80-202ENSMUST00000110808 BlmO88700 1416 aa20.43■□□□□ 0.86
Ino80-202ENSMUST00000110808 Fmn1Q05860 1466 aa20.42■□□□□ 0.86
Ino80-202ENSMUST00000110808 Stra8P70278 393 aa20.34■□□□□ 0.85
Ino80-202ENSMUST00000110808 Myt1Q8CFC2 1127 aa20.32■□□□□ 0.84
Ino80-202ENSMUST00000110808 Chic2Q9D9G3 165 aa20.31■□□□□ 0.84
Ino80-202ENSMUST00000110808 Eea1Q8BL66 1411 aa20.3■□□□□ 0.84
Ino80-202ENSMUST00000110808 Rapgef2Q8CHG7 1496 aa20.3■□□□□ 0.84
Ino80-202ENSMUST00000110808 Zbtb7cQ8VCZ7 619 aa20.3■□□□□ 0.84
Ino80-202ENSMUST00000110808 Pds5bQ4VA53 1446 aaKnown RBP20.3■□□□□ 0.84
Ino80-202ENSMUST00000110808 Smarca4Q3TKT4 1613 aaKnown RBP20.29■□□□□ 0.84
Ino80-202ENSMUST00000110808 Ercc6F8VPZ5 1481 aa20.26■□□□□ 0.83
Ino80-202ENSMUST00000110808 Gm38655A0A286YDK6 273 aa20.23■□□□□ 0.83
Ino80-202ENSMUST00000110808 Csrnp3P59055 597 aa20.23■□□□□ 0.83
Ino80-202ENSMUST00000110808 Cttnbp2B9EJA2 1648 aa20.22■□□□□ 0.83
Ino80-202ENSMUST00000110808 Fkbp15Q6P9Q6 1216 aaKnown RBP20.21■□□□□ 0.83
Ino80-202ENSMUST00000110808 Ccdc18Q640L5 1455 aa20.2■□□□□ 0.82
Ino80-202ENSMUST00000110808 BicraF8VPZ9 1578 aa20.19■□□□□ 0.82
Ino80-202ENSMUST00000110808 Anks4bQ8K3X6 423 aa20.18■□□□□ 0.82
Ino80-202ENSMUST00000110808 Atad2bE9Q166 1460 aaKnown RBP20.18■□□□□ 0.82
Ino80-202ENSMUST00000110808 Eif5bQ05D44 1216 aaKnown RBP20.18■□□□□ 0.82
Ino80-202ENSMUST00000110808 NrdcQ8BHG1 1161 aa20.1■□□□□ 0.81
Ino80-202ENSMUST00000110808 Tnnt3Q9QZ47 272 aa20.08■□□□□ 0.8
Ino80-202ENSMUST00000110808 Iqgap2Q3UQ44 1575 aa20.07■□□□□ 0.8
Ino80-202ENSMUST00000110808 Zbtb4Q5F293 982 aa20.06■□□□□ 0.8
Ino80-202ENSMUST00000110808 Cc2d2aQ8CFW7 1633 aa20.06■□□□□ 0.8
Ino80-202ENSMUST00000110808 Ifnlr1Q8CGK5 535 aa20.04■□□□□ 0.8
Ino80-202ENSMUST00000110808 Ccer2J3QPU5 274 aa20■□□□□ 0.79
Ino80-202ENSMUST00000110808 Hnrnpul2Q00PI9 745 aaKnown RBP19.99■□□□□ 0.79
Ino80-202ENSMUST00000110808 1700123L14RikQ3V2K7 440 aa19.99■□□□□ 0.79
Ino80-202ENSMUST00000110808 Cux2P70298 1426 aa19.96■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 99.5 ms