RNA–Protein interactions for RNA: ENSMUST00000108677.1

Usp43-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp43, Length 4,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-202ENSMUST00000108677 Rhox8Q6VSS7 320 aa28.82■■■□□ 2.2
Usp43-202ENSMUST00000108677 NischQ80TM9 1593 aa26.3■■□□□ 1.8
Usp43-202ENSMUST00000108677 Ehmt2Q9Z148 1263 aaKnown RBP26.25■■□□□ 1.79
Usp43-202ENSMUST00000108677 Ccdc136Q3TVA9 1136 aa26.05■■□□□ 1.76
Usp43-202ENSMUST00000108677 Rpgrip1Q9EPQ2 1331 aa25.55■■□□□ 1.68
Usp43-202ENSMUST00000108677 Cngb1E1AZ71 1325 aa25.32■■□□□ 1.64
Usp43-202ENSMUST00000108677 Gab3Q8BSM5 595 aa25.26■■□□□ 1.63
Usp43-202ENSMUST00000108677 Esf1Q3V1V3 845 aaKnown RBP25.19■■□□□ 1.62
Usp43-202ENSMUST00000108677 Trim41Q5NCC3 630 aa25.17■■□□□ 1.62
Usp43-202ENSMUST00000108677 Zeb1Q64318 1117 aa24.8■■□□□ 1.56
Usp43-202ENSMUST00000108677 Abcc9P70170 1546 aa24.68■■□□□ 1.54
Usp43-202ENSMUST00000108677 Wdr66E9Q743 1299 aa24.63■■□□□ 1.53
Usp43-202ENSMUST00000108677 Myt1lP97500 1187 aa24.6■■□□□ 1.53
Usp43-202ENSMUST00000108677 Acin1Q9JIX8 1338 aaKnown RBP24.53■■□□□ 1.52
Usp43-202ENSMUST00000108677 Npm2Q80W85 207 aa24.51■■□□□ 1.51
Usp43-202ENSMUST00000108677 Las1lA2BE28 776 aaKnown RBP24.39■■□□□ 1.5
Usp43-202ENSMUST00000108677 HrcG5E8J6 738 aa24.32■■□□□ 1.48
Usp43-202ENSMUST00000108677 Ccdc180J3QNE4 1664 aa24.28■■□□□ 1.48
Usp43-202ENSMUST00000108677 UbtfP25976 765 aaKnown RBP24.24■■□□□ 1.47
Usp43-202ENSMUST00000108677 Abcc8B2RUS7 1588 aa24.22■■□□□ 1.47
Usp43-202ENSMUST00000108677 Ube2uB1AUC4 352 aa24.19■■□□□ 1.46
Usp43-202ENSMUST00000108677 Zcchc6Q5BLK4 1491 aaKnown RBP24.13■■□□□ 1.45
Usp43-202ENSMUST00000108677 Gm35339A0A140LHH9 1649 aa24.07■■□□□ 1.44
Usp43-202ENSMUST00000108677 Il27Q8K3I6 234 aa23.93■■□□□ 1.42
Usp43-202ENSMUST00000108677 Rtl1Q7M732 1744 aa23.88■■□□□ 1.41
Usp43-202ENSMUST00000108677 NefmP08553 848 aa23.87■■□□□ 1.41
Usp43-202ENSMUST00000108677 Pcgf6Q99NA9 353 aa23.85■■□□□ 1.41
Usp43-202ENSMUST00000108677 Ppargc1bQ8VHJ7 1014 aa23.69■■□□□ 1.38
Usp43-202ENSMUST00000108677 Ap3b1Q9Z1T1 1105 aa23.59■■□□□ 1.37
Usp43-202ENSMUST00000108677 Supt5hO55201 1082 aaKnown RBP23.58■■□□□ 1.37
Usp43-202ENSMUST00000108677 Mier1Q5UAK0 511 aa23.41■■□□□ 1.34
Usp43-202ENSMUST00000108677 Slc24a1Q91WD8 1130 aa23.39■■□□□ 1.34
Usp43-202ENSMUST00000108677 Fam50aQ9WV03 339 aaKnown RBP23.35■■□□□ 1.33
Usp43-202ENSMUST00000108677 Chic1Q8CBW7 227 aa23.34■■□□□ 1.33
Usp43-202ENSMUST00000108677 Cdk11bP24788 784 aaKnown RBP23.25■■□□□ 1.31
Usp43-202ENSMUST00000108677 Plekhg3Q4VAC9 1341 aa23.18■■□□□ 1.3
Usp43-202ENSMUST00000108677 Nop58Q6DFW4 536 aaKnown RBP23.14■■□□□ 1.29
Usp43-202ENSMUST00000108677 Dcaf1Q80TR8 1506 aa23.11■■□□□ 1.29
Usp43-202ENSMUST00000108677 Neurod1Q60867 357 aa23.1■■□□□ 1.29
Usp43-202ENSMUST00000108677 CenpbP27790 599 aa23.08■■□□□ 1.29
Usp43-202ENSMUST00000108677 Rb1cc1Q9ESK9 1588 aa23.08■■□□□ 1.28
Usp43-202ENSMUST00000108677 NclP09405 707 aaKnown RBP23.06■■□□□ 1.28
Usp43-202ENSMUST00000108677 TonslQ6NZL6 1363 aa23.03■■□□□ 1.28
Usp43-202ENSMUST00000108677 Lmod2Q3UHZ5 550 aa23.02■■□□□ 1.28
Usp43-202ENSMUST00000108677 Cep164Q5DU05 1446 aa22.93■■□□□ 1.26
Usp43-202ENSMUST00000108677 Eid3Q3V124 375 aa22.89■■□□□ 1.26
Usp43-202ENSMUST00000108677 Brd4Q9ESU6 1400 aaKnown RBP22.89■■□□□ 1.25
Usp43-202ENSMUST00000108677 Stra8P70278 393 aa22.88■■□□□ 1.25
Usp43-202ENSMUST00000108677 Pelp1Q9DBD5 1123 aaKnown RBP22.87■■□□□ 1.25
Usp43-202ENSMUST00000108677 Sall2Q9QX96 1004 aa22.82■■□□□ 1.24
Usp43-202ENSMUST00000108677 Npm1Q61937 292 aaKnown RBP22.81■■□□□ 1.24
Usp43-202ENSMUST00000108677 Mapk8ip2Q9ERE9 830 aa22.79■■□□□ 1.24
Usp43-202ENSMUST00000108677 Eif5bQ05D44 1216 aaKnown RBP22.69■■□□□ 1.22
Usp43-202ENSMUST00000108677 Clip1Q922J3 1391 aa22.66■■□□□ 1.22
Usp43-202ENSMUST00000108677 ClspnQ80YR7 1315 aa22.62■■□□□ 1.21
Usp43-202ENSMUST00000108677 Zbtb7cQ8VCZ7 619 aa22.62■■□□□ 1.21
Usp43-202ENSMUST00000108677 NrdcQ8BHG1 1161 aa22.61■■□□□ 1.21
Usp43-202ENSMUST00000108677 NacadQ5SWP3 1504 aa22.59■■□□□ 1.21
Usp43-202ENSMUST00000108677 Baz1aO88379 1555 aa22.54■■□□□ 1.2
Usp43-202ENSMUST00000108677 Gm38655A0A286YDK6 273 aa22.49■■□□□ 1.19
Usp43-202ENSMUST00000108677 Tnnt3Q9QZ47 272 aa22.47■■□□□ 1.19
Usp43-202ENSMUST00000108677 Rsf1E9PWW9 1441 aaKnown RBP22.4■■□□□ 1.18
Usp43-202ENSMUST00000108677 Kdm5dQ62240 1548 aa22.39■■□□□ 1.17
Usp43-202ENSMUST00000108677 Zbtb4Q5F293 982 aa22.39■■□□□ 1.17
Usp43-202ENSMUST00000108677 Os9Q8K2C7 672 aa22.38■■□□□ 1.17
Usp43-202ENSMUST00000108677 Csrnp3P59055 597 aa22.33■■□□□ 1.16
Usp43-202ENSMUST00000108677 Golga3P55937 1487 aa22.33■■□□□ 1.16
Usp43-202ENSMUST00000108677 Ubl4bQ9CQ84 188 aa22.32■■□□□ 1.16
Usp43-202ENSMUST00000108677 Aebp2Q9Z248 504 aaKnown RBP22.32■■□□□ 1.16
Usp43-202ENSMUST00000108677 Anp32bQ9EST5 272 aaKnown RBP22.3■■□□□ 1.16
Usp43-202ENSMUST00000108677 Fkbp15Q6P9Q6 1216 aaKnown RBP22.3■■□□□ 1.16
Usp43-202ENSMUST00000108677 Ttbk1Q6PCN3 1308 aa22.3■■□□□ 1.16
Usp43-202ENSMUST00000108677 Hnrnpul2Q00PI9 745 aaKnown RBP22.29■■□□□ 1.16
Usp43-202ENSMUST00000108677 Ifnlr1Q8CGK5 535 aa22.27■■□□□ 1.16
Usp43-202ENSMUST00000108677 Chic2Q9D9G3 165 aa22.24■■□□□ 1.15
Usp43-202ENSMUST00000108677 Anks4bQ8K3X6 423 aa22.19■■□□□ 1.14
Usp43-202ENSMUST00000108677 BlmO88700 1416 aa22.18■■□□□ 1.14
Usp43-202ENSMUST00000108677 Amer1Q7TS75 1132 aa22.14■■□□□ 1.13
Usp43-202ENSMUST00000108677 Ccdc88bQ4QRL3 1481 aa22.14■■□□□ 1.13
Usp43-202ENSMUST00000108677 Setd5Q5XJV7 1441 aa22.13■■□□□ 1.13
Usp43-202ENSMUST00000108677 NeflP08551 543 aa22.09■■□□□ 1.13
Usp43-202ENSMUST00000108677 Kif15Q6P9L6 1387 aa22.03■■□□□ 1.12
Usp43-202ENSMUST00000108677 Prdm10Q3UTQ7 1184 aa22.03■■□□□ 1.12
Usp43-202ENSMUST00000108677 Erich6D3Z6S9 713 aa22.01■■□□□ 1.11
Usp43-202ENSMUST00000108677 Ccer2J3QPU5 274 aa21.9■■□□□ 1.1
Usp43-202ENSMUST00000108677 4933416C03RikQ3V063 378 aa21.84■■□□□ 1.09
Usp43-202ENSMUST00000108677 Anp32aO35381 247 aa21.83■■□□□ 1.09
Usp43-202ENSMUST00000108677 Mrs2Q5NCE8 434 aa21.83■■□□□ 1.08
Usp43-202ENSMUST00000108677 Eea1Q8BL66 1411 aa21.82■■□□□ 1.08
Usp43-202ENSMUST00000108677 Cecr2E9Q2Z1 1453 aa21.81■■□□□ 1.08
Usp43-202ENSMUST00000108677 Myt1Q8CFC2 1127 aa21.79■■□□□ 1.08
Usp43-202ENSMUST00000108677 Aplp2Q06335 707 aa21.75■■□□□ 1.07
Usp43-202ENSMUST00000108677 1700123L14RikQ3V2K7 440 aa21.75■■□□□ 1.07
Usp43-202ENSMUST00000108677 ScribQ80U72 1612 aa21.74■■□□□ 1.07
Usp43-202ENSMUST00000108677 Calr4Q3TQS0 420 aa21.72■■□□□ 1.07
Usp43-202ENSMUST00000108677 Sycp2Q9CUU3 1500 aa21.69■■□□□ 1.06
Usp43-202ENSMUST00000108677 Cep162Q6ZQ06 1403 aa21.69■■□□□ 1.06
Usp43-202ENSMUST00000108677 Rgl3Q3UYI5 709 aa21.69■■□□□ 1.06
Usp43-202ENSMUST00000108677 Atp1b4Q99ME6 356 aa21.69■■□□□ 1.06
Usp43-202ENSMUST00000108677 Ppp4r2Q0VGB7 417 aa21.66■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms