RNA–Protein interactions for RNA: ENSMUST00000108321.1

Hps3-202, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

TSL 1 (best) BASIC

Gene Hps3, Length 3,385 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-202ENSMUST00000108321 NischQ80TM9 1593 aa23.57■■□□□ 1.36
Hps3-202ENSMUST00000108321 Rhox8Q6VSS7 320 aa23.43■■□□□ 1.34
Hps3-202ENSMUST00000108321 Abcc9P70170 1546 aa22.61■■□□□ 1.21
Hps3-202ENSMUST00000108321 Ehmt2Q9Z148 1263 aaKnown RBP22.33■■□□□ 1.17
Hps3-202ENSMUST00000108321 Gm35339A0A140LHH9 1649 aa22.3■■□□□ 1.16
Hps3-202ENSMUST00000108321 Abcc8B2RUS7 1588 aa22.21■■□□□ 1.15
Hps3-202ENSMUST00000108321 Rpgrip1Q9EPQ2 1331 aa22.18■■□□□ 1.14
Hps3-202ENSMUST00000108321 Ccdc180J3QNE4 1664 aa21.93■■□□□ 1.1
Hps3-202ENSMUST00000108321 Rtl1Q7M732 1744 aa21.9■■□□□ 1.1
Hps3-202ENSMUST00000108321 Acin1Q9JIX8 1338 aaKnown RBP21.78■■□□□ 1.08
Hps3-202ENSMUST00000108321 Ccdc136Q3TVA9 1136 aa21.64■■□□□ 1.05
Hps3-202ENSMUST00000108321 Pcgf6Q99NA9 353 aa21.41■■□□□ 1.02
Hps3-202ENSMUST00000108321 Zcchc6Q5BLK4 1491 aaKnown RBP21.2■□□□□ 0.98
Hps3-202ENSMUST00000108321 HrcG5E8J6 738 aa21.17■□□□□ 0.98
Hps3-202ENSMUST00000108321 Trim41Q5NCC3 630 aa21.16■□□□□ 0.98
Hps3-202ENSMUST00000108321 Supt5hO55201 1082 aaKnown RBP21.02■□□□□ 0.96
Hps3-202ENSMUST00000108321 Zeb1Q64318 1117 aa20.92■□□□□ 0.94
Hps3-202ENSMUST00000108321 Dcaf1Q80TR8 1506 aa20.9■□□□□ 0.94
Hps3-202ENSMUST00000108321 Gab3Q8BSM5 595 aa20.82■□□□□ 0.92
Hps3-202ENSMUST00000108321 Rb1cc1Q9ESK9 1588 aa20.64■□□□□ 0.9
Hps3-202ENSMUST00000108321 Neurod1Q60867 357 aa20.64■□□□□ 0.89
Hps3-202ENSMUST00000108321 Cngb1E1AZ71 1325 aa20.63■□□□□ 0.89
Hps3-202ENSMUST00000108321 ScribQ80U72 1612 aa20.63■□□□□ 0.89
Hps3-202ENSMUST00000108321 Kdm5dQ62240 1548 aa20.43■□□□□ 0.86
Hps3-202ENSMUST00000108321 Mier1Q5UAK0 511 aa20.34■□□□□ 0.85
Hps3-202ENSMUST00000108321 Chic1Q8CBW7 227 aa20.33■□□□□ 0.85
Hps3-202ENSMUST00000108321 Wdr66E9Q743 1299 aa20.33■□□□□ 0.84
Hps3-202ENSMUST00000108321 Cep164Q5DU05 1446 aa20.29■□□□□ 0.84
Hps3-202ENSMUST00000108321 Sall2Q9QX96 1004 aa20.29■□□□□ 0.84
Hps3-202ENSMUST00000108321 Las1lA2BE28 776 aaKnown RBP20.27■□□□□ 0.84
Hps3-202ENSMUST00000108321 NefmP08553 848 aa20.27■□□□□ 0.84
Hps3-202ENSMUST00000108321 Ppargc1bQ8VHJ7 1014 aa20.27■□□□□ 0.84
Hps3-202ENSMUST00000108321 Baz1aO88379 1555 aa20.25■□□□□ 0.83
Hps3-202ENSMUST00000108321 NacadQ5SWP3 1504 aa20.18■□□□□ 0.82
Hps3-202ENSMUST00000108321 Esf1Q3V1V3 845 aaKnown RBP20.18■□□□□ 0.82
Hps3-202ENSMUST00000108321 UbtfP25976 765 aaKnown RBP20.17■□□□□ 0.82
Hps3-202ENSMUST00000108321 Csrnp3P59055 597 aa20.07■□□□□ 0.8
Hps3-202ENSMUST00000108321 Rsf1E9PWW9 1441 aaKnown RBP20.01■□□□□ 0.79
Hps3-202ENSMUST00000108321 1700123L14RikQ3V2K7 440 aa19.96■□□□□ 0.79
Hps3-202ENSMUST00000108321 Myt1lP97500 1187 aa19.95■□□□□ 0.78
Hps3-202ENSMUST00000108321 Aebp2Q9Z248 504 aaKnown RBP19.91■□□□□ 0.78
Hps3-202ENSMUST00000108321 Gm38655A0A286YDK6 273 aa19.89■□□□□ 0.77
Hps3-202ENSMUST00000108321 Cdk11bP24788 784 aaKnown RBP19.87■□□□□ 0.77
Hps3-202ENSMUST00000108321 Anks4bQ8K3X6 423 aa19.86■□□□□ 0.77
Hps3-202ENSMUST00000108321 Nop58Q6DFW4 536 aaKnown RBP19.85■□□□□ 0.77
Hps3-202ENSMUST00000108321 Ccdc88bQ4QRL3 1481 aa19.81■□□□□ 0.76
Hps3-202ENSMUST00000108321 Cecr2E9Q2Z1 1453 aa19.75■□□□□ 0.75
Hps3-202ENSMUST00000108321 Sycp2Q9CUU3 1500 aa19.72■□□□□ 0.75
Hps3-202ENSMUST00000108321 Smarca2Q6DIC0 1577 aa19.72■□□□□ 0.75
Hps3-202ENSMUST00000108321 ClspnQ80YR7 1315 aa19.63■□□□□ 0.73
Hps3-202ENSMUST00000108321 Npm2Q80W85 207 aa19.63■□□□□ 0.73
Hps3-202ENSMUST00000108321 CenpbP27790 599 aa19.62■□□□□ 0.73
Hps3-202ENSMUST00000108321 Brd4Q9ESU6 1400 aaKnown RBP19.61■□□□□ 0.73
Hps3-202ENSMUST00000108321 TonslQ6NZL6 1363 aa19.56■□□□□ 0.72
Hps3-202ENSMUST00000108321 Golga3P55937 1487 aa19.55■□□□□ 0.72
Hps3-202ENSMUST00000108321 Plekhg3Q4VAC9 1341 aa19.55■□□□□ 0.72
Hps3-202ENSMUST00000108321 Crybg2B7ZCC2 1516 aa19.53■□□□□ 0.72
Hps3-202ENSMUST00000108321 Aplp2Q06335 707 aa19.44■□□□□ 0.7
Hps3-202ENSMUST00000108321 Eid3Q3V124 375 aa19.43■□□□□ 0.7
Hps3-202ENSMUST00000108321 Mapk8ip2Q9ERE9 830 aa19.41■□□□□ 0.7
Hps3-202ENSMUST00000108321 Il27Q8K3I6 234 aa19.39■□□□□ 0.69
Hps3-202ENSMUST00000108321 Synj1Q8CHC4 1574 aa19.38■□□□□ 0.69
Hps3-202ENSMUST00000108321 Ap3b1Q9Z1T1 1105 aa19.36■□□□□ 0.69
Hps3-202ENSMUST00000108321 BicraF8VPZ9 1578 aa19.28■□□□□ 0.68
Hps3-202ENSMUST00000108321 CftrP26361 1476 aa19.27■□□□□ 0.68
Hps3-202ENSMUST00000108321 SafbD3YXK2 937 aaKnown RBP19.25■□□□□ 0.67
Hps3-202ENSMUST00000108321 Clip1Q922J3 1391 aa19.21■□□□□ 0.67
Hps3-202ENSMUST00000108321 Hnrnpul2Q00PI9 745 aaKnown RBP19.18■□□□□ 0.66
Hps3-202ENSMUST00000108321 Myt1Q8CFC2 1127 aa19.14■□□□□ 0.65
Hps3-202ENSMUST00000108321 Fam71e1A1L3C1 212 aa19.12■□□□□ 0.65
Hps3-202ENSMUST00000108321 Slc24a1Q91WD8 1130 aa19.1■□□□□ 0.65
Hps3-202ENSMUST00000108321 Cep162Q6ZQ06 1403 aa19.08■□□□□ 0.64
Hps3-202ENSMUST00000108321 Fam50aQ9WV03 339 aaKnown RBP19.05■□□□□ 0.64
Hps3-202ENSMUST00000108321 Rapgef2Q8CHG7 1496 aa19.04■□□□□ 0.64
Hps3-202ENSMUST00000108321 NclP09405 707 aaKnown RBP19.04■□□□□ 0.64
Hps3-202ENSMUST00000108321 Tnnt3Q9QZ47 272 aa18.99■□□□□ 0.63
Hps3-202ENSMUST00000108321 Cc2d2aQ8CFW7 1633 aa18.96■□□□□ 0.63
Hps3-202ENSMUST00000108321 Ube2uB1AUC4 352 aa18.93■□□□□ 0.62
Hps3-202ENSMUST00000108321 Lmod2Q3UHZ5 550 aa18.9■□□□□ 0.62
Hps3-202ENSMUST00000108321 Smarca4Q3TKT4 1613 aaKnown RBP18.89■□□□□ 0.61
Hps3-202ENSMUST00000108321 DiexfQ8BTT6 772 aaKnown RBP18.86■□□□□ 0.61
Hps3-202ENSMUST00000108321 Cttnbp2B9EJA2 1648 aa18.85■□□□□ 0.61
Hps3-202ENSMUST00000108321 Top2bQ64511 1612 aa18.84■□□□□ 0.61
Hps3-202ENSMUST00000108321 Fmn1Q05860 1466 aa18.83■□□□□ 0.6
Hps3-202ENSMUST00000108321 Stra8P70278 393 aa18.78■□□□□ 0.6
Hps3-202ENSMUST00000108321 Eif5bQ05D44 1216 aaKnown RBP18.78■□□□□ 0.6
Hps3-202ENSMUST00000108321 Setd5Q5XJV7 1441 aa18.75■□□□□ 0.59
Hps3-202ENSMUST00000108321 Ncapd3Q6ZQK0 1506 aa18.75■□□□□ 0.59
Hps3-202ENSMUST00000108321 Anp32aO35381 247 aa18.75■□□□□ 0.59
Hps3-202ENSMUST00000108321 Iqgap2Q3UQ44 1575 aa18.72■□□□□ 0.59
Hps3-202ENSMUST00000108321 Top2aQ01320 1528 aaKnown RBP18.72■□□□□ 0.59
Hps3-202ENSMUST00000108321 Kif15Q6P9L6 1387 aa18.71■□□□□ 0.59
Hps3-202ENSMUST00000108321 Bcl11aQ9QYE3 773 aa18.69■□□□□ 0.58
Hps3-202ENSMUST00000108321 BlmO88700 1416 aa18.69■□□□□ 0.58
Hps3-202ENSMUST00000108321 Eea1Q8BL66 1411 aa18.68■□□□□ 0.58
Hps3-202ENSMUST00000108321 Calr4Q3TQS0 420 aa18.68■□□□□ 0.58
Hps3-202ENSMUST00000108321 Hspa5P20029 655 aaKnown RBP18.65■□□□□ 0.58
Hps3-202ENSMUST00000108321 Atad2bE9Q166 1460 aaKnown RBP18.62■□□□□ 0.57
Hps3-202ENSMUST00000108321 Ttbk1Q6PCN3 1308 aa18.62■□□□□ 0.57
Hps3-202ENSMUST00000108321 Znf710Q3U288 666 aa18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms