RNA–Protein interactions for RNA: ENSMUST00000108173.9

Rffl-206, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rffl, Length 3,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-206ENSMUST00000108173 NischQ80TM9 1593 aa28.96■■■□□ 2.23
Rffl-206ENSMUST00000108173 Rhox8Q6VSS7 320 aa28.61■■■□□ 2.17
Rffl-206ENSMUST00000108173 Abcc9P70170 1546 aa27.81■■■□□ 2.04
Rffl-206ENSMUST00000108173 Gm35339A0A140LHH9 1649 aa27.38■■□□□ 1.97
Rffl-206ENSMUST00000108173 Abcc8B2RUS7 1588 aa27.22■■□□□ 1.95
Rffl-206ENSMUST00000108173 Ehmt2Q9Z148 1263 aaKnown RBP26.71■■□□□ 1.87
Rffl-206ENSMUST00000108173 Ccdc136Q3TVA9 1136 aa26.49■■□□□ 1.83
Rffl-206ENSMUST00000108173 Rtl1Q7M732 1744 aa26.4■■□□□ 1.82
Rffl-206ENSMUST00000108173 Ccdc180J3QNE4 1664 aa26.38■■□□□ 1.81
Rffl-206ENSMUST00000108173 Rpgrip1Q9EPQ2 1331 aa25.95■■□□□ 1.74
Rffl-206ENSMUST00000108173 Zcchc6Q5BLK4 1491 aaKnown RBP25.75■■□□□ 1.71
Rffl-206ENSMUST00000108173 Acin1Q9JIX8 1338 aaKnown RBP25.74■■□□□ 1.71
Rffl-206ENSMUST00000108173 Trim41Q5NCC3 630 aa25.68■■□□□ 1.7
Rffl-206ENSMUST00000108173 HrcG5E8J6 738 aa25.55■■□□□ 1.68
Rffl-206ENSMUST00000108173 Rb1cc1Q9ESK9 1588 aa25.4■■□□□ 1.66
Rffl-206ENSMUST00000108173 Gab3Q8BSM5 595 aa25.33■■□□□ 1.65
Rffl-206ENSMUST00000108173 Dcaf1Q80TR8 1506 aa25.29■■□□□ 1.64
Rffl-206ENSMUST00000108173 Cngb1E1AZ71 1325 aa25.27■■□□□ 1.64
Rffl-206ENSMUST00000108173 ScribQ80U72 1612 aa25.17■■□□□ 1.62
Rffl-206ENSMUST00000108173 Pcgf6Q99NA9 353 aa25.13■■□□□ 1.61
Rffl-206ENSMUST00000108173 Kdm5dQ62240 1548 aa24.97■■□□□ 1.59
Rffl-206ENSMUST00000108173 Baz1aO88379 1555 aa24.93■■□□□ 1.58
Rffl-206ENSMUST00000108173 Zeb1Q64318 1117 aa24.88■■□□□ 1.57
Rffl-206ENSMUST00000108173 Chic1Q8CBW7 227 aa24.85■■□□□ 1.57
Rffl-206ENSMUST00000108173 Supt5hO55201 1082 aaKnown RBP24.82■■□□□ 1.56
Rffl-206ENSMUST00000108173 Esf1Q3V1V3 845 aaKnown RBP24.76■■□□□ 1.55
Rffl-206ENSMUST00000108173 NacadQ5SWP3 1504 aa24.64■■□□□ 1.54
Rffl-206ENSMUST00000108173 Cep164Q5DU05 1446 aa24.6■■□□□ 1.53
Rffl-206ENSMUST00000108173 Rsf1E9PWW9 1441 aaKnown RBP24.44■■□□□ 1.5
Rffl-206ENSMUST00000108173 Mier1Q5UAK0 511 aa24.41■■□□□ 1.5
Rffl-206ENSMUST00000108173 UbtfP25976 765 aaKnown RBP24.37■■□□□ 1.49
Rffl-206ENSMUST00000108173 Myt1lP97500 1187 aa24.34■■□□□ 1.49
Rffl-206ENSMUST00000108173 Smarca2Q6DIC0 1577 aa24.3■■□□□ 1.48
Rffl-206ENSMUST00000108173 Ccdc88bQ4QRL3 1481 aa24.26■■□□□ 1.47
Rffl-206ENSMUST00000108173 Ppargc1bQ8VHJ7 1014 aa24.23■■□□□ 1.47
Rffl-206ENSMUST00000108173 Wdr66E9Q743 1299 aa24.19■■□□□ 1.46
Rffl-206ENSMUST00000108173 Cecr2E9Q2Z1 1453 aa24.19■■□□□ 1.46
Rffl-206ENSMUST00000108173 Neurod1Q60867 357 aa24.17■■□□□ 1.46
Rffl-206ENSMUST00000108173 Brd4Q9ESU6 1400 aaKnown RBP24.16■■□□□ 1.46
Rffl-206ENSMUST00000108173 NefmP08553 848 aa24.13■■□□□ 1.45
Rffl-206ENSMUST00000108173 Sall2Q9QX96 1004 aa24.07■■□□□ 1.44
Rffl-206ENSMUST00000108173 Sycp2Q9CUU3 1500 aa24.07■■□□□ 1.44
Rffl-206ENSMUST00000108173 Npm2Q80W85 207 aa24.02■■□□□ 1.44
Rffl-206ENSMUST00000108173 Crybg2B7ZCC2 1516 aa24■■□□□ 1.43
Rffl-206ENSMUST00000108173 Golga3P55937 1487 aa24■■□□□ 1.43
Rffl-206ENSMUST00000108173 Las1lA2BE28 776 aaKnown RBP23.89■■□□□ 1.41
Rffl-206ENSMUST00000108173 Synj1Q8CHC4 1574 aa23.85■■□□□ 1.41
Rffl-206ENSMUST00000108173 Aebp2Q9Z248 504 aaKnown RBP23.78■■□□□ 1.4
Rffl-206ENSMUST00000108173 Plekhg3Q4VAC9 1341 aa23.77■■□□□ 1.4
Rffl-206ENSMUST00000108173 Il27Q8K3I6 234 aa23.7■■□□□ 1.38
Rffl-206ENSMUST00000108173 Ap3b1Q9Z1T1 1105 aa23.69■■□□□ 1.38
Rffl-206ENSMUST00000108173 CftrP26361 1476 aa23.66■■□□□ 1.38
Rffl-206ENSMUST00000108173 Csrnp3P59055 597 aa23.5■■□□□ 1.35
Rffl-206ENSMUST00000108173 BicraF8VPZ9 1578 aa23.49■■□□□ 1.35
Rffl-206ENSMUST00000108173 Eid3Q3V124 375 aa23.47■■□□□ 1.35
Rffl-206ENSMUST00000108173 Nop58Q6DFW4 536 aaKnown RBP23.46■■□□□ 1.35
Rffl-206ENSMUST00000108173 Cdk11bP24788 784 aaKnown RBP23.44■■□□□ 1.34
Rffl-206ENSMUST00000108173 TonslQ6NZL6 1363 aa23.43■■□□□ 1.34
Rffl-206ENSMUST00000108173 Clip1Q922J3 1391 aa23.4■■□□□ 1.34
Rffl-206ENSMUST00000108173 Gm38655A0A286YDK6 273 aa23.38■■□□□ 1.33
Rffl-206ENSMUST00000108173 Cc2d2aQ8CFW7 1633 aa23.36■■□□□ 1.33
Rffl-206ENSMUST00000108173 ClspnQ80YR7 1315 aa23.33■■□□□ 1.32
Rffl-206ENSMUST00000108173 Rapgef2Q8CHG7 1496 aa23.32■■□□□ 1.32
Rffl-206ENSMUST00000108173 Cep162Q6ZQ06 1403 aa23.31■■□□□ 1.32
Rffl-206ENSMUST00000108173 Mapk8ip2Q9ERE9 830 aa23.3■■□□□ 1.32
Rffl-206ENSMUST00000108173 Anks4bQ8K3X6 423 aa23.27■■□□□ 1.32
Rffl-206ENSMUST00000108173 1700123L14RikQ3V2K7 440 aa23.24■■□□□ 1.31
Rffl-206ENSMUST00000108173 Cttnbp2B9EJA2 1648 aa23.21■■□□□ 1.31
Rffl-206ENSMUST00000108173 Top2bQ64511 1612 aa23.2■■□□□ 1.31
Rffl-206ENSMUST00000108173 Fmn1Q05860 1466 aa23.18■■□□□ 1.3
Rffl-206ENSMUST00000108173 Fam50aQ9WV03 339 aaKnown RBP23.15■■□□□ 1.3
Rffl-206ENSMUST00000108173 Lmod2Q3UHZ5 550 aa23.13■■□□□ 1.29
Rffl-206ENSMUST00000108173 Smarca4Q3TKT4 1613 aaKnown RBP23.13■■□□□ 1.29
Rffl-206ENSMUST00000108173 Top2aQ01320 1528 aaKnown RBP23■■□□□ 1.27
Rffl-206ENSMUST00000108173 Ube2uB1AUC4 352 aa23■■□□□ 1.27
Rffl-206ENSMUST00000108173 Setd5Q5XJV7 1441 aa22.93■■□□□ 1.26
Rffl-206ENSMUST00000108173 NclP09405 707 aaKnown RBP22.9■■□□□ 1.26
Rffl-206ENSMUST00000108173 Iqgap2Q3UQ44 1575 aa22.88■■□□□ 1.25
Rffl-206ENSMUST00000108173 Kif15Q6P9L6 1387 aa22.87■■□□□ 1.25
Rffl-206ENSMUST00000108173 Slc24a1Q91WD8 1130 aa22.83■■□□□ 1.25
Rffl-206ENSMUST00000108173 PtprkP35822 1457 aa22.83■■□□□ 1.24
Rffl-206ENSMUST00000108173 BlmO88700 1416 aa22.82■■□□□ 1.24
Rffl-206ENSMUST00000108173 Eea1Q8BL66 1411 aa22.81■■□□□ 1.24
Rffl-206ENSMUST00000108173 CenpbP27790 599 aa22.79■■□□□ 1.24
Rffl-206ENSMUST00000108173 SafbD3YXK2 937 aaKnown RBP22.71■■□□□ 1.23
Rffl-206ENSMUST00000108173 Arhgap35Q91YM2 1499 aa22.71■■□□□ 1.23
Rffl-206ENSMUST00000108173 Ncapd3Q6ZQK0 1506 aa22.7■■□□□ 1.22
Rffl-206ENSMUST00000108173 Atad2bE9Q166 1460 aaKnown RBP22.68■■□□□ 1.22
Rffl-206ENSMUST00000108173 Hnrnpul2Q00PI9 745 aaKnown RBP22.68■■□□□ 1.22
Rffl-206ENSMUST00000108173 Arap1Q4LDD4 1452 aa22.67■■□□□ 1.22
Rffl-206ENSMUST00000108173 Npm1Q61937 292 aaKnown RBP22.67■■□□□ 1.22
Rffl-206ENSMUST00000108173 Aplp2Q06335 707 aa22.65■■□□□ 1.22
Rffl-206ENSMUST00000108173 Chic2Q9D9G3 165 aa22.58■■□□□ 1.21
Rffl-206ENSMUST00000108173 Hspa5P20029 655 aaKnown RBP22.58■■□□□ 1.2
Rffl-206ENSMUST00000108173 Pds5bQ4VA53 1446 aaKnown RBP22.56■■□□□ 1.2
Rffl-206ENSMUST00000108173 Ubl4bQ9CQ84 188 aa22.55■■□□□ 1.2
Rffl-206ENSMUST00000108173 Baz1bQ9Z277 1479 aa22.48■■□□□ 1.19
Rffl-206ENSMUST00000108173 Frmpd1A2AKB4 1549 aa22.48■■□□□ 1.19
Rffl-206ENSMUST00000108173 AqrQ8CFQ3 1481 aaKnown RBP22.46■■□□□ 1.19
Rffl-206ENSMUST00000108173 Sin3aQ60520 1274 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms