RNA–Protein interactions for RNA: ENSMUST00000107342.1

Chtop-204, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 2,411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-204ENSMUST00000107342 NischQ80TM9 1593 aa35.49■■■■□ 3.27
Chtop-204ENSMUST00000107342 Gm35339A0A140LHH9 1649 aa34.87■■■■□ 3.17
Chtop-204ENSMUST00000107342 Abcc9P70170 1546 aa34.55■■■■□ 3.12
Chtop-204ENSMUST00000107342 Abcc8B2RUS7 1588 aa33.62■■■□□ 2.97
Chtop-204ENSMUST00000107342 Rtl1Q7M732 1744 aa33.36■■■□□ 2.93
Chtop-204ENSMUST00000107342 Rhox8Q6VSS7 320 aa33.01■■■□□ 2.88
Chtop-204ENSMUST00000107342 Ccdc180J3QNE4 1664 aa32.73■■■□□ 2.83
Chtop-204ENSMUST00000107342 Zcchc6Q5BLK4 1491 aaKnown RBP31.91■■■□□ 2.7
Chtop-204ENSMUST00000107342 Rpgrip1Q9EPQ2 1331 aa31.59■■■□□ 2.65
Chtop-204ENSMUST00000107342 Dcaf1Q80TR8 1506 aa31.56■■■□□ 2.64
Chtop-204ENSMUST00000107342 ScribQ80U72 1612 aa31.15■■■□□ 2.58
Chtop-204ENSMUST00000107342 Rb1cc1Q9ESK9 1588 aa31.14■■■□□ 2.58
Chtop-204ENSMUST00000107342 HrcG5E8J6 738 aa31.04■■■□□ 2.56
Chtop-204ENSMUST00000107342 Acin1Q9JIX8 1338 aaKnown RBP30.87■■■□□ 2.53
Chtop-204ENSMUST00000107342 Baz1aO88379 1555 aa30.82■■■□□ 2.52
Chtop-204ENSMUST00000107342 Kdm5dQ62240 1548 aa30.63■■■□□ 2.49
Chtop-204ENSMUST00000107342 Ccdc136Q3TVA9 1136 aa30.56■■■□□ 2.48
Chtop-204ENSMUST00000107342 NacadQ5SWP3 1504 aa30.35■■■□□ 2.45
Chtop-204ENSMUST00000107342 Crybg2B7ZCC2 1516 aa30.24■■■□□ 2.43
Chtop-204ENSMUST00000107342 Ehmt2Q9Z148 1263 aaKnown RBP30.24■■■□□ 2.43
Chtop-204ENSMUST00000107342 Smarca2Q6DIC0 1577 aa30.18■■■□□ 2.42
Chtop-204ENSMUST00000107342 Trim41Q5NCC3 630 aa30.15■■■□□ 2.42
Chtop-204ENSMUST00000107342 Cep164Q5DU05 1446 aa30.02■■■□□ 2.4
Chtop-204ENSMUST00000107342 Pcgf6Q99NA9 353 aa29.71■■■□□ 2.35
Chtop-204ENSMUST00000107342 Sycp2Q9CUU3 1500 aa29.68■■■□□ 2.34
Chtop-204ENSMUST00000107342 Brd4Q9ESU6 1400 aaKnown RBP29.43■■■□□ 2.3
Chtop-204ENSMUST00000107342 Rsf1E9PWW9 1441 aaKnown RBP29.42■■■□□ 2.3
Chtop-204ENSMUST00000107342 Chic1Q8CBW7 227 aa29.26■■■□□ 2.28
Chtop-204ENSMUST00000107342 Golga3P55937 1487 aa29.24■■■□□ 2.27
Chtop-204ENSMUST00000107342 Cngb1E1AZ71 1325 aa29.21■■■□□ 2.27
Chtop-204ENSMUST00000107342 Cecr2E9Q2Z1 1453 aa29.21■■■□□ 2.27
Chtop-204ENSMUST00000107342 Ccdc88bQ4QRL3 1481 aa29.16■■■□□ 2.26
Chtop-204ENSMUST00000107342 Synj1Q8CHC4 1574 aa29.12■■■□□ 2.25
Chtop-204ENSMUST00000107342 Supt5hO55201 1082 aaKnown RBP29.1■■■□□ 2.25
Chtop-204ENSMUST00000107342 Gab3Q8BSM5 595 aa29.02■■■□□ 2.24
Chtop-204ENSMUST00000107342 BicraF8VPZ9 1578 aa28.97■■■□□ 2.23
Chtop-204ENSMUST00000107342 Top2bQ64511 1612 aa28.94■■■□□ 2.22
Chtop-204ENSMUST00000107342 NefmP08553 848 aa28.91■■■□□ 2.22
Chtop-204ENSMUST00000107342 CftrP26361 1476 aa28.91■■■□□ 2.22
Chtop-204ENSMUST00000107342 Cttnbp2B9EJA2 1648 aa28.79■■■□□ 2.2
Chtop-204ENSMUST00000107342 Mier1Q5UAK0 511 aa28.75■■■□□ 2.19
Chtop-204ENSMUST00000107342 Esf1Q3V1V3 845 aaKnown RBP28.61■■■□□ 2.17
Chtop-204ENSMUST00000107342 Zeb1Q64318 1117 aa28.59■■■□□ 2.17
Chtop-204ENSMUST00000107342 Cc2d2aQ8CFW7 1633 aa28.58■■■□□ 2.17
Chtop-204ENSMUST00000107342 Rapgef2Q8CHG7 1496 aa28.51■■■□□ 2.15
Chtop-204ENSMUST00000107342 Smarca4Q3TKT4 1613 aaKnown RBP28.5■■■□□ 2.15
Chtop-204ENSMUST00000107342 Neurod1Q60867 357 aa28.48■■■□□ 2.15
Chtop-204ENSMUST00000107342 Fmn1Q05860 1466 aa28.42■■■□□ 2.14
Chtop-204ENSMUST00000107342 Top2aQ01320 1528 aaKnown RBP28.39■■■□□ 2.14
Chtop-204ENSMUST00000107342 Sall2Q9QX96 1004 aa28.33■■■□□ 2.13
Chtop-204ENSMUST00000107342 Cep162Q6ZQ06 1403 aa28.22■■■□□ 2.11
Chtop-204ENSMUST00000107342 UbtfP25976 765 aaKnown RBP28.14■■■□□ 2.1
Chtop-204ENSMUST00000107342 Eif4g1Q6NZJ6 1600 aaKnown RBP28.06■■■□□ 2.08
Chtop-204ENSMUST00000107342 Iqgap2Q3UQ44 1575 aa28.05■■■□□ 2.08
Chtop-204ENSMUST00000107342 Las1lA2BE28 776 aaKnown RBP28.04■■■□□ 2.08
Chtop-204ENSMUST00000107342 Anks4bQ8K3X6 423 aa27.95■■■□□ 2.06
Chtop-204ENSMUST00000107342 Aebp2Q9Z248 504 aaKnown RBP27.89■■■□□ 2.06
Chtop-204ENSMUST00000107342 TnnQ80Z71 1560 aa27.88■■■□□ 2.05
Chtop-204ENSMUST00000107342 Myt1lP97500 1187 aa27.88■■■□□ 2.05
Chtop-204ENSMUST00000107342 ClspnQ80YR7 1315 aa27.87■■■□□ 2.05
Chtop-204ENSMUST00000107342 Wdr66E9Q743 1299 aa27.83■■■□□ 2.05
Chtop-204ENSMUST00000107342 Clip1Q922J3 1391 aa27.81■■■□□ 2.04
Chtop-204ENSMUST00000107342 Atad2bE9Q166 1460 aaKnown RBP27.79■■■□□ 2.04
Chtop-204ENSMUST00000107342 Npm2Q80W85 207 aa27.78■■■□□ 2.04
Chtop-204ENSMUST00000107342 Ncapd3Q6ZQK0 1506 aa27.76■■■□□ 2.04
Chtop-204ENSMUST00000107342 TonslQ6NZL6 1363 aa27.72■■■□□ 2.03
Chtop-204ENSMUST00000107342 Arhgap35Q91YM2 1499 aa27.64■■■□□ 2.02
Chtop-204ENSMUST00000107342 Cdk11bP24788 784 aaKnown RBP27.64■■■□□ 2.02
Chtop-204ENSMUST00000107342 NrkQ9R0G8 1455 aa27.61■■■□□ 2.01
Chtop-204ENSMUST00000107342 Plekhg3Q4VAC9 1341 aa27.6■■■□□ 2.01
Chtop-204ENSMUST00000107342 Nop58Q6DFW4 536 aaKnown RBP27.6■■■□□ 2.01
Chtop-204ENSMUST00000107342 Pds5bQ4VA53 1446 aaKnown RBP27.55■■■□□ 2
Chtop-204ENSMUST00000107342 Eea1Q8BL66 1411 aa27.51■■□□□ 1.99
Chtop-204ENSMUST00000107342 Arap1Q4LDD4 1452 aa27.5■■□□□ 1.99
Chtop-204ENSMUST00000107342 Lamc3Q9R0B6 1581 aa27.5■■□□□ 1.99
Chtop-204ENSMUST00000107342 Csrnp3P59055 597 aa27.5■■□□□ 1.99
Chtop-204ENSMUST00000107342 1700123L14RikQ3V2K7 440 aa27.49■■□□□ 1.99
Chtop-204ENSMUST00000107342 PtprkP35822 1457 aa27.49■■□□□ 1.99
Chtop-204ENSMUST00000107342 Arhgef5E9Q7D5 1581 aa27.45■■□□□ 1.99
Chtop-204ENSMUST00000107342 Ccdc18Q640L5 1455 aa27.45■■□□□ 1.98
Chtop-204ENSMUST00000107342 Kdm5bQ80Y84 1544 aa27.43■■□□□ 1.98
Chtop-204ENSMUST00000107342 Map3k1P53349 1493 aa27.43■■□□□ 1.98
Chtop-204ENSMUST00000107342 Wdr62Q3U3T8 1523 aa27.43■■□□□ 1.98
Chtop-204ENSMUST00000107342 Frmpd1A2AKB4 1549 aa27.42■■□□□ 1.98
Chtop-204ENSMUST00000107342 Shroom4Q1W617 1475 aa27.4■■□□□ 1.98
Chtop-204ENSMUST00000107342 Camsap1A2AHC3 1581 aa27.33■■□□□ 1.97
Chtop-204ENSMUST00000107342 TchhA0A0B4J1F9 1599 aa27.31■■□□□ 1.96
Chtop-204ENSMUST00000107342 Ppargc1bQ8VHJ7 1014 aa27.3■■□□□ 1.96
Chtop-204ENSMUST00000107342 Setd5Q5XJV7 1441 aa27.3■■□□□ 1.96
Chtop-204ENSMUST00000107342 Aplp2Q06335 707 aa27.3■■□□□ 1.96
Chtop-204ENSMUST00000107342 Tiam1Q60610 1591 aa27.29■■□□□ 1.96
Chtop-204ENSMUST00000107342 Erich3F6QRE9 1637 aa27.26■■□□□ 1.95
Chtop-204ENSMUST00000107342 Unc13aQ4KUS2 1712 aa27.23■■□□□ 1.95
Chtop-204ENSMUST00000107342 Kif15Q6P9L6 1387 aa27.2■■□□□ 1.95
Chtop-204ENSMUST00000107342 Mroh2bQ7M6Y6 1581 aa27.15■■□□□ 1.94
Chtop-204ENSMUST00000107342 Grin2bQ01097 1482 aa27.14■■□□□ 1.94
Chtop-204ENSMUST00000107342 Baz1bQ9Z277 1479 aa27.14■■□□□ 1.93
Chtop-204ENSMUST00000107342 Ankrd26Q811D2 1581 aa27.12■■□□□ 1.93
Chtop-204ENSMUST00000107342 Naip1Q9QWK5 1403 aa27.12■■□□□ 1.93
Chtop-204ENSMUST00000107342 AqrQ8CFQ3 1481 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms