RNA–Protein interactions for RNA: ENSMUST00000107295.9

Retreg3-202, Transcript of Reticulophagy regulator 3, mousemouse

TSL 1 (best) BASIC

Gene Retreg3, Length 3,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3-202ENSMUST00000107295 NischQ80TM9 1593 aa27.83■■■□□ 2.05
Retreg3-202ENSMUST00000107295 Rhox8Q6VSS7 320 aa27.04■■□□□ 1.92
Retreg3-202ENSMUST00000107295 Abcc9P70170 1546 aa26.87■■□□□ 1.89
Retreg3-202ENSMUST00000107295 Gm35339A0A140LHH9 1649 aa26.62■■□□□ 1.85
Retreg3-202ENSMUST00000107295 Abcc8B2RUS7 1588 aa26.2■■□□□ 1.79
Retreg3-202ENSMUST00000107295 Rtl1Q7M732 1744 aa25.85■■□□□ 1.73
Retreg3-202ENSMUST00000107295 Ccdc180J3QNE4 1664 aa25.72■■□□□ 1.71
Retreg3-202ENSMUST00000107295 Ehmt2Q9Z148 1263 aaKnown RBP25.48■■□□□ 1.67
Retreg3-202ENSMUST00000107295 Rpgrip1Q9EPQ2 1331 aa25.31■■□□□ 1.64
Retreg3-202ENSMUST00000107295 Zcchc6Q5BLK4 1491 aaKnown RBP25.13■■□□□ 1.61
Retreg3-202ENSMUST00000107295 Ccdc136Q3TVA9 1136 aa25.07■■□□□ 1.6
Retreg3-202ENSMUST00000107295 Acin1Q9JIX8 1338 aaKnown RBP25.03■■□□□ 1.6
Retreg3-202ENSMUST00000107295 HrcG5E8J6 738 aa24.65■■□□□ 1.54
Retreg3-202ENSMUST00000107295 Trim41Q5NCC3 630 aa24.49■■□□□ 1.51
Retreg3-202ENSMUST00000107295 Pcgf6Q99NA9 353 aa24.46■■□□□ 1.51
Retreg3-202ENSMUST00000107295 Rb1cc1Q9ESK9 1588 aa24.44■■□□□ 1.5
Retreg3-202ENSMUST00000107295 Dcaf1Q80TR8 1506 aa24.4■■□□□ 1.5
Retreg3-202ENSMUST00000107295 ScribQ80U72 1612 aa24.24■■□□□ 1.47
Retreg3-202ENSMUST00000107295 Supt5hO55201 1082 aaKnown RBP24.06■■□□□ 1.44
Retreg3-202ENSMUST00000107295 Baz1aO88379 1555 aa24.04■■□□□ 1.44
Retreg3-202ENSMUST00000107295 Gab3Q8BSM5 595 aa23.98■■□□□ 1.43
Retreg3-202ENSMUST00000107295 Kdm5dQ62240 1548 aa23.96■■□□□ 1.43
Retreg3-202ENSMUST00000107295 Cngb1E1AZ71 1325 aa23.88■■□□□ 1.41
Retreg3-202ENSMUST00000107295 Zeb1Q64318 1117 aa23.81■■□□□ 1.4
Retreg3-202ENSMUST00000107295 Cep164Q5DU05 1446 aa23.79■■□□□ 1.4
Retreg3-202ENSMUST00000107295 Chic1Q8CBW7 227 aa23.75■■□□□ 1.39
Retreg3-202ENSMUST00000107295 NacadQ5SWP3 1504 aa23.59■■□□□ 1.37
Retreg3-202ENSMUST00000107295 Neurod1Q60867 357 aa23.56■■□□□ 1.36
Retreg3-202ENSMUST00000107295 Rsf1E9PWW9 1441 aaKnown RBP23.53■■□□□ 1.36
Retreg3-202ENSMUST00000107295 Smarca2Q6DIC0 1577 aa23.5■■□□□ 1.35
Retreg3-202ENSMUST00000107295 Mier1Q5UAK0 511 aa23.47■■□□□ 1.35
Retreg3-202ENSMUST00000107295 Ccdc88bQ4QRL3 1481 aa23.33■■□□□ 1.33
Retreg3-202ENSMUST00000107295 Sall2Q9QX96 1004 aa23.3■■□□□ 1.32
Retreg3-202ENSMUST00000107295 Esf1Q3V1V3 845 aaKnown RBP23.28■■□□□ 1.32
Retreg3-202ENSMUST00000107295 NefmP08553 848 aa23.27■■□□□ 1.32
Retreg3-202ENSMUST00000107295 Crybg2B7ZCC2 1516 aa23.2■■□□□ 1.3
Retreg3-202ENSMUST00000107295 UbtfP25976 765 aaKnown RBP23.18■■□□□ 1.3
Retreg3-202ENSMUST00000107295 Cecr2E9Q2Z1 1453 aa23.18■■□□□ 1.3
Retreg3-202ENSMUST00000107295 Brd4Q9ESU6 1400 aaKnown RBP23.13■■□□□ 1.29
Retreg3-202ENSMUST00000107295 Ppargc1bQ8VHJ7 1014 aa23.11■■□□□ 1.29
Retreg3-202ENSMUST00000107295 Wdr66E9Q743 1299 aa23.1■■□□□ 1.29
Retreg3-202ENSMUST00000107295 Sycp2Q9CUU3 1500 aa23.07■■□□□ 1.28
Retreg3-202ENSMUST00000107295 Golga3P55937 1487 aa23.07■■□□□ 1.28
Retreg3-202ENSMUST00000107295 Myt1lP97500 1187 aa22.97■■□□□ 1.27
Retreg3-202ENSMUST00000107295 Synj1Q8CHC4 1574 aa22.95■■□□□ 1.26
Retreg3-202ENSMUST00000107295 Aebp2Q9Z248 504 aaKnown RBP22.95■■□□□ 1.26
Retreg3-202ENSMUST00000107295 Las1lA2BE28 776 aaKnown RBP22.87■■□□□ 1.25
Retreg3-202ENSMUST00000107295 Csrnp3P59055 597 aa22.85■■□□□ 1.25
Retreg3-202ENSMUST00000107295 1700123L14RikQ3V2K7 440 aa22.73■■□□□ 1.23
Retreg3-202ENSMUST00000107295 Anks4bQ8K3X6 423 aa22.71■■□□□ 1.23
Retreg3-202ENSMUST00000107295 CftrP26361 1476 aa22.71■■□□□ 1.23
Retreg3-202ENSMUST00000107295 Npm2Q80W85 207 aa22.66■■□□□ 1.22
Retreg3-202ENSMUST00000107295 Nop58Q6DFW4 536 aaKnown RBP22.64■■□□□ 1.21
Retreg3-202ENSMUST00000107295 Cdk11bP24788 784 aaKnown RBP22.63■■□□□ 1.21
Retreg3-202ENSMUST00000107295 Plekhg3Q4VAC9 1341 aa22.62■■□□□ 1.21
Retreg3-202ENSMUST00000107295 BicraF8VPZ9 1578 aa22.57■■□□□ 1.2
Retreg3-202ENSMUST00000107295 Cc2d2aQ8CFW7 1633 aa22.57■■□□□ 1.2
Retreg3-202ENSMUST00000107295 Gm38655A0A286YDK6 273 aa22.56■■□□□ 1.2
Retreg3-202ENSMUST00000107295 ClspnQ80YR7 1315 aa22.56■■□□□ 1.2
Retreg3-202ENSMUST00000107295 Top2bQ64511 1612 aa22.53■■□□□ 1.2
Retreg3-202ENSMUST00000107295 TonslQ6NZL6 1363 aa22.51■■□□□ 1.19
Retreg3-202ENSMUST00000107295 Rapgef2Q8CHG7 1496 aa22.47■■□□□ 1.19
Retreg3-202ENSMUST00000107295 Cep162Q6ZQ06 1403 aa22.42■■□□□ 1.18
Retreg3-202ENSMUST00000107295 Cttnbp2B9EJA2 1648 aa22.39■■□□□ 1.17
Retreg3-202ENSMUST00000107295 Ap3b1Q9Z1T1 1105 aa22.38■■□□□ 1.17
Retreg3-202ENSMUST00000107295 Clip1Q922J3 1391 aa22.36■■□□□ 1.17
Retreg3-202ENSMUST00000107295 Eid3Q3V124 375 aa22.36■■□□□ 1.17
Retreg3-202ENSMUST00000107295 Fmn1Q05860 1466 aa22.29■■□□□ 1.16
Retreg3-202ENSMUST00000107295 Top2aQ01320 1528 aaKnown RBP22.25■■□□□ 1.15
Retreg3-202ENSMUST00000107295 Il27Q8K3I6 234 aa22.22■■□□□ 1.15
Retreg3-202ENSMUST00000107295 Mapk8ip2Q9ERE9 830 aa22.21■■□□□ 1.15
Retreg3-202ENSMUST00000107295 Smarca4Q3TKT4 1613 aaKnown RBP22.19■■□□□ 1.14
Retreg3-202ENSMUST00000107295 Aplp2Q06335 707 aa22.17■■□□□ 1.14
Retreg3-202ENSMUST00000107295 CenpbP27790 599 aa22.13■■□□□ 1.13
Retreg3-202ENSMUST00000107295 Ncapd3Q6ZQK0 1506 aa22.04■■□□□ 1.12
Retreg3-202ENSMUST00000107295 SafbD3YXK2 937 aaKnown RBP21.99■■□□□ 1.11
Retreg3-202ENSMUST00000107295 Hnrnpul2Q00PI9 745 aaKnown RBP21.98■■□□□ 1.11
Retreg3-202ENSMUST00000107295 Fam50aQ9WV03 339 aaKnown RBP21.92■■□□□ 1.1
Retreg3-202ENSMUST00000107295 Iqgap2Q3UQ44 1575 aa21.91■■□□□ 1.1
Retreg3-202ENSMUST00000107295 PtprkP35822 1457 aa21.91■■□□□ 1.1
Retreg3-202ENSMUST00000107295 Setd5Q5XJV7 1441 aa21.89■■□□□ 1.09
Retreg3-202ENSMUST00000107295 Arap1Q4LDD4 1452 aa21.88■■□□□ 1.09
Retreg3-202ENSMUST00000107295 Arhgap35Q91YM2 1499 aa21.87■■□□□ 1.09
Retreg3-202ENSMUST00000107295 Eea1Q8BL66 1411 aa21.86■■□□□ 1.09
Retreg3-202ENSMUST00000107295 Lmod2Q3UHZ5 550 aa21.86■■□□□ 1.09
Retreg3-202ENSMUST00000107295 NclP09405 707 aaKnown RBP21.82■■□□□ 1.08
Retreg3-202ENSMUST00000107295 Eif4g1Q6NZJ6 1600 aaKnown RBP21.82■■□□□ 1.08
Retreg3-202ENSMUST00000107295 BlmO88700 1416 aa21.75■■□□□ 1.07
Retreg3-202ENSMUST00000107295 Fam71e1A1L3C1 212 aa21.74■■□□□ 1.07
Retreg3-202ENSMUST00000107295 Slc24a1Q91WD8 1130 aa21.67■■□□□ 1.06
Retreg3-202ENSMUST00000107295 Kif15Q6P9L6 1387 aa21.67■■□□□ 1.06
Retreg3-202ENSMUST00000107295 Arhgef5E9Q7D5 1581 aa21.66■■□□□ 1.06
Retreg3-202ENSMUST00000107295 Tnnt3Q9QZ47 272 aa21.64■■□□□ 1.06
Retreg3-202ENSMUST00000107295 Pds5bQ4VA53 1446 aaKnown RBP21.64■■□□□ 1.05
Retreg3-202ENSMUST00000107295 Kdm5bQ80Y84 1544 aa21.64■■□□□ 1.05
Retreg3-202ENSMUST00000107295 Baz1bQ9Z277 1479 aa21.63■■□□□ 1.05
Retreg3-202ENSMUST00000107295 Atad2bE9Q166 1460 aaKnown RBP21.63■■□□□ 1.05
Retreg3-202ENSMUST00000107295 AqrQ8CFQ3 1481 aaKnown RBP21.63■■□□□ 1.05
Retreg3-202ENSMUST00000107295 Ccdc18Q640L5 1455 aa21.62■■□□□ 1.05
Retreg3-202ENSMUST00000107295 Ube2uB1AUC4 352 aa21.61■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms