RNA–Protein interactions for RNA: ENSMUST00000105840.7

Usp48-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp48, Length 5,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-205ENSMUST00000105840 Rhox8Q6VSS7 320 aa37,57■■■■□ 3,6
Usp48-205ENSMUST00000105840 Rpgrip1Q9EPQ2 1331 aa35,62■■■■□ 3,29
Usp48-205ENSMUST00000105840 Ehmt2Q9Z148 1263 aaKnown RBP34,75■■■■□ 3,15
Usp48-205ENSMUST00000105840 Las1lA2BE28 776 aaKnown RBP34,36■■■■□ 3,09
Usp48-205ENSMUST00000105840 Cngb1E1AZ71 1325 aa34,11■■■■□ 3,05
Usp48-205ENSMUST00000105840 Wdr66E9Q743 1299 aa33,71■■■□□ 2,99
Usp48-205ENSMUST00000105840 Zeb1Q64318 1117 aa33,51■■■□□ 2,96
Usp48-205ENSMUST00000105840 Ccdc136Q3TVA9 1136 aa33,33■■■□□ 2,93
Usp48-205ENSMUST00000105840 Pelp1Q9DBD5 1123 aaKnown RBP33,31■■■□□ 2,92
Usp48-205ENSMUST00000105840 Acin1Q9JIX8 1338 aaKnown RBP32,95■■■□□ 2,86
Usp48-205ENSMUST00000105840 Gab3Q8BSM5 595 aa32,9■■■□□ 2,86
Usp48-205ENSMUST00000105840 CenpbP27790 599 aa32,76■■■□□ 2,83
Usp48-205ENSMUST00000105840 Esf1Q3V1V3 845 aaKnown RBP32,73■■■□□ 2,83
Usp48-205ENSMUST00000105840 Trim41Q5NCC3 630 aa32,63■■■□□ 2,81
Usp48-205ENSMUST00000105840 Ube2uB1AUC4 352 aa32,63■■■□□ 2,81
Usp48-205ENSMUST00000105840 Amer1Q7TS75 1132 aa32,31■■■□□ 2,76
Usp48-205ENSMUST00000105840 NefmP08553 848 aa32,29■■■□□ 2,76
Usp48-205ENSMUST00000105840 Npm2Q80W85 207 aa32,28■■■□□ 2,76
Usp48-205ENSMUST00000105840 Myt1lP97500 1187 aa32,21■■■□□ 2,75
Usp48-205ENSMUST00000105840 NischQ80TM9 1593 aa32,17■■■□□ 2,74
Usp48-205ENSMUST00000105840 Pcgf6Q99NA9 353 aa32,1■■■□□ 2,73
Usp48-205ENSMUST00000105840 UbtfP25976 765 aaKnown RBP31,96■■■□□ 2,71
Usp48-205ENSMUST00000105840 Stra8P70278 393 aa31,89■■■□□ 2,7
Usp48-205ENSMUST00000105840 Ccdc180J3QNE4 1664 aa31,8■■■□□ 2,68
Usp48-205ENSMUST00000105840 Cdk11bP24788 784 aaKnown RBP31,8■■■□□ 2,68
Usp48-205ENSMUST00000105840 Slc24a1Q91WD8 1130 aa31,75■■■□□ 2,67
Usp48-205ENSMUST00000105840 Myt1Q8CFC2 1127 aa31,73■■■□□ 2,67
Usp48-205ENSMUST00000105840 HrcG5E8J6 738 aa31,53■■■□□ 2,64
Usp48-205ENSMUST00000105840 Ttbk1Q6PCN3 1308 aa31,52■■■□□ 2,64
Usp48-205ENSMUST00000105840 Supt5hO55201 1082 aaKnown RBP31,41■■■□□ 2,62
Usp48-205ENSMUST00000105840 Nop58Q6DFW4 536 aaKnown RBP31,41■■■□□ 2,62
Usp48-205ENSMUST00000105840 Tnnt3Q9QZ47 272 aa31,28■■■□□ 2,6
Usp48-205ENSMUST00000105840 Rtl1Q7M732 1744 aa31,28■■■□□ 2,6
Usp48-205ENSMUST00000105840 Ppargc1bQ8VHJ7 1014 aa31,16■■■□□ 2,58
Usp48-205ENSMUST00000105840 4933416C03RikQ3V063 378 aa31,15■■■□□ 2,58
Usp48-205ENSMUST00000105840 NrdcQ8BHG1 1161 aa30,92■■■□□ 2,54
Usp48-205ENSMUST00000105840 Eif5bQ05D44 1216 aaKnown RBP30,89■■■□□ 2,54
Usp48-205ENSMUST00000105840 NclP09405 707 aaKnown RBP30,86■■■□□ 2,53
Usp48-205ENSMUST00000105840 4930567H17RikQ3V0K5 233 aa30,83■■■□□ 2,53
Usp48-205ENSMUST00000105840 TonslQ6NZL6 1363 aa30,76■■■□□ 2,51
Usp48-205ENSMUST00000105840 Fam50aQ9WV03 339 aaKnown RBP30,72■■■□□ 2,51
Usp48-205ENSMUST00000105840 NeflP08551 543 aa30,71■■■□□ 2,51
Usp48-205ENSMUST00000105840 Rtl5Q5DTT4 599 aa30,68■■■□□ 2,5
Usp48-205ENSMUST00000105840 Neurod1Q60867 357 aa30,67■■■□□ 2,5
Usp48-205ENSMUST00000105840 Mier1Q5UAK0 511 aa30,66■■■□□ 2,5
Usp48-205ENSMUST00000105840 Ap3b1Q9Z1T1 1105 aa30,63■■■□□ 2,49
Usp48-205ENSMUST00000105840 DiexfQ8BTT6 772 aaKnown RBP30,63■■■□□ 2,49
Usp48-205ENSMUST00000105840 Il27Q8K3I6 234 aa30,6■■■□□ 2,49
Usp48-205ENSMUST00000105840 Anp32bQ9EST5 272 aaKnown RBP30,6■■■□□ 2,49
Usp48-205ENSMUST00000105840 ClspnQ80YR7 1315 aa30,37■■■□□ 2,45
Usp48-205ENSMUST00000105840 Anp32aO35381 247 aa30,32■■■□□ 2,44
Usp48-205ENSMUST00000105840 Zcchc6Q5BLK4 1491 aaKnown RBP30,3■■■□□ 2,44
Usp48-205ENSMUST00000105840 Gm38655A0A286YDK6 273 aa30,22■■■□□ 2,43
Usp48-205ENSMUST00000105840 Csrnp3P59055 597 aa30,18■■■□□ 2,42
Usp48-205ENSMUST00000105840 Anks4bQ8K3X6 423 aa30,1■■■□□ 2,41
Usp48-205ENSMUST00000105840 Sall2Q9QX96 1004 aa30,05■■■□□ 2,4
Usp48-205ENSMUST00000105840 DaxxO35613 739 aa30,03■■■□□ 2,4
Usp48-205ENSMUST00000105840 Os9Q8K2C7 672 aa30,03■■■□□ 2,4
Usp48-205ENSMUST00000105840 Aplp2Q06335 707 aa29,92■■■□□ 2,38
Usp48-205ENSMUST00000105840 Plekhg3Q4VAC9 1341 aa29,88■■■□□ 2,37
Usp48-205ENSMUST00000105840 Mapk8ip2Q9ERE9 830 aa29,87■■■□□ 2,37
Usp48-205ENSMUST00000105840 Abcc9P70170 1546 aa29,84■■■□□ 2,37
Usp48-205ENSMUST00000105840 Dcaf1Q80TR8 1506 aa29,77■■■□□ 2,36
Usp48-205ENSMUST00000105840 Lmod2Q3UHZ5 550 aa29,69■■■□□ 2,34
Usp48-205ENSMUST00000105840 Eid3Q3V124 375 aa29,62■■■□□ 2,33
Usp48-205ENSMUST00000105840 Calr4Q3TQS0 420 aa29,48■■■□□ 2,31
Usp48-205ENSMUST00000105840 Zbtb7cQ8VCZ7 619 aa29,47■■■□□ 2,31
Usp48-205ENSMUST00000105840 Ppp4r2Q0VGB7 417 aa29,45■■■□□ 2,3
Usp48-205ENSMUST00000105840 Gm35339A0A140LHH9 1649 aa29,44■■■□□ 2,3
Usp48-205ENSMUST00000105840 ArxO35085 564 aa29,4■■■□□ 2,3
Usp48-205ENSMUST00000105840 Zbtb4Q5F293 982 aa29,39■■■□□ 2,29
Usp48-205ENSMUST00000105840 1700123L14RikQ3V2K7 440 aa29,33■■■□□ 2,29
Usp48-205ENSMUST00000105840 Cep164Q5DU05 1446 aa29,33■■■□□ 2,29
Usp48-205ENSMUST00000105840 Nlrp6Q91WS2 869 aa29,26■■■□□ 2,27
Usp48-205ENSMUST00000105840 Clip1Q922J3 1391 aa29,23■■■□□ 2,27
Usp48-205ENSMUST00000105840 Hnrnpul2Q00PI9 745 aaKnown RBP29,23■■■□□ 2,27
Usp48-205ENSMUST00000105840 Polr3glQ8R0C0 218 aa29,21■■■□□ 2,27
Usp48-205ENSMUST00000105840 Wdr43Q6ZQL4 677 aaKnown RBP29,21■■■□□ 2,27
Usp48-205ENSMUST00000105840 Chic1Q8CBW7 227 aa29,19■■■□□ 2,26
Usp48-205ENSMUST00000105840 Fam71e1A1L3C1 212 aa29,08■■■□□ 2,25
Usp48-205ENSMUST00000105840 Hsp90aa1P07901 733 aaKnown RBP29,07■■■□□ 2,24
Usp48-205ENSMUST00000105840 Prdm10Q3UTQ7 1184 aa29,07■■■□□ 2,24
Usp48-205ENSMUST00000105840 Npm1Q61937 292 aaKnown RBP29,05■■■□□ 2,24
Usp48-205ENSMUST00000105840 Abcc8B2RUS7 1588 aa28,99■■■□□ 2,23
Usp48-205ENSMUST00000105840 Ccdc9Q8VC31 543 aaKnown RBP28,98■■■□□ 2,23
Usp48-205ENSMUST00000105840 Ccer2J3QPU5 274 aa28,97■■■□□ 2,23
Usp48-205ENSMUST00000105840 Erich6D3Z6S9 713 aa28,97■■■□□ 2,23
Usp48-205ENSMUST00000105840 Mrs2Q5NCE8 434 aa28,97■■■□□ 2,23
Usp48-205ENSMUST00000105840 Upf2A2AT37 1269 aaKnown RBP28,94■■■□□ 2,22
Usp48-205ENSMUST00000105840 Aebp2Q9Z248 504 aaKnown RBP28,92■■■□□ 2,22
Usp48-205ENSMUST00000105840 Rad21Q61550 635 aaKnown RBP28,89■■■□□ 2,21
Usp48-205ENSMUST00000105840 Brd4Q9ESU6 1400 aaKnown RBP28,87■■■□□ 2,21
Usp48-205ENSMUST00000105840 Atp1b4Q99ME6 356 aa28,73■■■□□ 2,19
Usp48-205ENSMUST00000105840 Rangap1P46061 589 aaKnown RBP28,69■■■□□ 2,18
Usp48-205ENSMUST00000105840 Ythdc1E9Q5K9 736 aaKnown RBP28,68■■■□□ 2,18
Usp48-205ENSMUST00000105840 CanxP35564 591 aaKnown RBP28,68■■■□□ 2,18
Usp48-205ENSMUST00000105840 Bcl11aQ9QYE3 773 aa28,67■■■□□ 2,18
Usp48-205ENSMUST00000105840 Gm13697A2AK42 830 aa28,66■■■□□ 2,18
Usp48-205ENSMUST00000105840 Chic2Q9D9G3 165 aa28,66■■■□□ 2,18
Usp48-205ENSMUST00000105840 Lmod3E9QA62 571 aa28,65■■■□□ 2,18
Retrieved 100 of 22,080 RNA–protein pairs in 9,7 ms