RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Rhox8Q6VSS7 320 aa11.8□□□□□ -0.52
Scn3a-202ENSMUST00000100069 Rpgrip1Q9EPQ2 1331 aa11.35□□□□□ -0.59
Scn3a-202ENSMUST00000100069 Cngb1E1AZ71 1325 aa11.13□□□□□ -0.63
Scn3a-202ENSMUST00000100069 Las1lA2BE28 776 aaKnown RBP10.97□□□□□ -0.65
Scn3a-202ENSMUST00000100069 Pelp1Q9DBD5 1123 aaKnown RBP10.97□□□□□ -0.65
Scn3a-202ENSMUST00000100069 Amer1Q7TS75 1132 aa10.57□□□□□ -0.72
Scn3a-202ENSMUST00000100069 Wdr66E9Q743 1299 aa10.54□□□□□ -0.72
Scn3a-202ENSMUST00000100069 Esf1Q3V1V3 845 aaKnown RBP10.51□□□□□ -0.73
Scn3a-202ENSMUST00000100069 Ube2uB1AUC4 352 aa10.49□□□□□ -0.73
Scn3a-202ENSMUST00000100069 Rtl1Q7M732 1744 aa10.44□□□□□ -0.74
Scn3a-202ENSMUST00000100069 Myt1Q8CFC2 1127 aa10.44□□□□□ -0.74
Scn3a-202ENSMUST00000100069 Trim41Q5NCC3 630 aa10.43□□□□□ -0.74
Scn3a-202ENSMUST00000100069 Stra8P70278 393 aa10.42□□□□□ -0.74
Scn3a-202ENSMUST00000100069 Zeb1Q64318 1117 aa10.37□□□□□ -0.75
Scn3a-202ENSMUST00000100069 Npm2Q80W85 207 aa10.34□□□□□ -0.75
Scn3a-202ENSMUST00000100069 Ehmt2Q9Z148 1263 aaKnown RBP10.34□□□□□ -0.75
Scn3a-202ENSMUST00000100069 CenpbP27790 599 aa10.3□□□□□ -0.76
Scn3a-202ENSMUST00000100069 Ccdc136Q3TVA9 1136 aa10.3□□□□□ -0.76
Scn3a-202ENSMUST00000100069 Ccdc180J3QNE4 1664 aa10.29□□□□□ -0.76
Scn3a-202ENSMUST00000100069 NefmP08553 848 aa10.24□□□□□ -0.77
Scn3a-202ENSMUST00000100069 NischQ80TM9 1593 aa10.22□□□□□ -0.77
Scn3a-202ENSMUST00000100069 4930567H17RikQ3V0K5 233 aa10.19□□□□□ -0.78
Scn3a-202ENSMUST00000100069 Gab3Q8BSM5 595 aa10.13□□□□□ -0.79
Scn3a-202ENSMUST00000100069 Myt1lP97500 1187 aa10.1□□□□□ -0.79
Scn3a-202ENSMUST00000100069 Acin1Q9JIX8 1338 aaKnown RBP10.08□□□□□ -0.8
Scn3a-202ENSMUST00000100069 Anp32bQ9EST5 272 aaKnown RBP10.06□□□□□ -0.8
Scn3a-202ENSMUST00000100069 DiexfQ8BTT6 772 aaKnown RBP10.05□□□□□ -0.8
Scn3a-202ENSMUST00000100069 Tnnt3Q9QZ47 272 aa10□□□□□ -0.81
Scn3a-202ENSMUST00000100069 NeflP08551 543 aa9.97□□□□□ -0.81
Scn3a-202ENSMUST00000100069 NrdcQ8BHG1 1161 aa9.91□□□□□ -0.82
Scn3a-202ENSMUST00000100069 UbtfP25976 765 aaKnown RBP9.9□□□□□ -0.82
Scn3a-202ENSMUST00000100069 Rtl5Q5DTT4 599 aa9.89□□□□□ -0.83
Scn3a-202ENSMUST00000100069 HrcG5E8J6 738 aa9.88□□□□□ -0.83
Scn3a-202ENSMUST00000100069 Cdk11bP24788 784 aaKnown RBP9.87□□□□□ -0.83
Scn3a-202ENSMUST00000100069 Slc24a1Q91WD8 1130 aa9.84□□□□□ -0.83
Scn3a-202ENSMUST00000100069 4933416C03RikQ3V063 378 aa9.83□□□□□ -0.84
Scn3a-202ENSMUST00000100069 NclP09405 707 aaKnown RBP9.73□□□□□ -0.85
Scn3a-202ENSMUST00000100069 Os9Q8K2C7 672 aa9.71□□□□□ -0.85
Scn3a-202ENSMUST00000100069 Nop58Q6DFW4 536 aaKnown RBP9.69□□□□□ -0.86
Scn3a-202ENSMUST00000100069 Hdac5Q9Z2V6 1113 aa9.68□□□□□ -0.86
Scn3a-202ENSMUST00000100069 Pcgf6Q99NA9 353 aa9.67□□□□□ -0.86
Scn3a-202ENSMUST00000100069 Ttbk1Q6PCN3 1308 aa9.67□□□□□ -0.86
Scn3a-202ENSMUST00000100069 Fam50aQ9WV03 339 aaKnown RBP9.67□□□□□ -0.86
Scn3a-202ENSMUST00000100069 TonslQ6NZL6 1363 aa9.63□□□□□ -0.87
Scn3a-202ENSMUST00000100069 Il27Q8K3I6 234 aa9.63□□□□□ -0.87
Scn3a-202ENSMUST00000100069 Neurod1Q60867 357 aa9.62□□□□□ -0.87
Scn3a-202ENSMUST00000100069 Ythdc1E9Q5K9 736 aaKnown RBP9.6□□□□□ -0.87
Scn3a-202ENSMUST00000100069 Zcchc6Q5BLK4 1491 aaKnown RBP9.6□□□□□ -0.87
Scn3a-202ENSMUST00000100069 Eif5bQ05D44 1216 aaKnown RBP9.56□□□□□ -0.88
Scn3a-202ENSMUST00000100069 Anp32aO35381 247 aa9.49□□□□□ -0.89
Scn3a-202ENSMUST00000100069 Ap3b1Q9Z1T1 1105 aa9.48□□□□□ -0.89
Scn3a-202ENSMUST00000100069 ClspnQ80YR7 1315 aa9.44□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Abcc9P70170 1546 aa9.43□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Gm13697A2AK42 830 aa9.42□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Nlrp6Q91WS2 869 aa9.42□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Supt5hO55201 1082 aaKnown RBP9.41□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Npm1Q61937 292 aaKnown RBP9.4□□□□□ -0.9
Scn3a-202ENSMUST00000100069 Upf2A2AT37 1269 aaKnown RBP9.39□□□□□ -0.91
Scn3a-202ENSMUST00000100069 Ccer2J3QPU5 274 aa9.38□□□□□ -0.91
Scn3a-202ENSMUST00000100069 DaxxO35613 739 aa9.37□□□□□ -0.91
Scn3a-202ENSMUST00000100069 Mier1Q5UAK0 511 aa9.33□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Hnrnpul2Q00PI9 745 aaKnown RBP9.32□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Ccdc9Q8VC31 543 aaKnown RBP9.32□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Brd4Q9ESU6 1400 aaKnown RBP9.32□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Gm35339A0A140LHH9 1649 aa9.28□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Hsp90aa1P07901 733 aaKnown RBP9.28□□□□□ -0.92
Scn3a-202ENSMUST00000100069 Gm13695A2AK44 830 aa9.26□□□□□ -0.93
Scn3a-202ENSMUST00000100069 Atp1b4Q99ME6 356 aa9.26□□□□□ -0.93
Scn3a-202ENSMUST00000100069 CatipB9EKE5 520 aa9.25□□□□□ -0.93
Scn3a-202ENSMUST00000100069 Erich6D3Z6S9 713 aa9.23□□□□□ -0.93
Scn3a-202ENSMUST00000100069 Clstn2Q9ER65 966 aa9.22□□□□□ -0.93
Scn3a-202ENSMUST00000100069 Dcaf1Q80TR8 1506 aa9.21□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Polr3glQ8R0C0 218 aa9.21□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Ppargc1bQ8VHJ7 1014 aa9.2□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Lmod2Q3UHZ5 550 aa9.19□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Zbtb7cQ8VCZ7 619 aa9.19□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Cep164Q5DU05 1446 aa9.19□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Clip1Q922J3 1391 aa9.18□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Plekhg3Q4VAC9 1341 aa9.17□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Chic1Q8CBW7 227 aa9.15□□□□□ -0.94
Scn3a-202ENSMUST00000100069 Anks4bQ8K3X6 423 aa9.14□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Aplp2Q06335 707 aa9.14□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Abcc8B2RUS7 1588 aa9.12□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Calr4Q3TQS0 420 aa9.11□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Zfp777B9EKF4 885 aa9.1□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Trim44Q9QXA7 346 aa9.1□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Bcl11aQ9QYE3 773 aa9.1□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Rb1cc1Q9ESK9 1588 aa9.1□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Csrnp3P59055 597 aa9.09□□□□□ -0.95
Scn3a-202ENSMUST00000100069 Chmp4bQ9D8B3 224 aaKnown RBP9.08□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Fgd1P52734 960 aa9.08□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Adam1bQ8R534 806 aa9.08□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Wdr43Q6ZQL4 677 aaKnown RBP9.07□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Ifnlr1Q8CGK5 535 aa9.04□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Znf326O88291 580 aa9.04□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Htatsf1Q8BGC0 757 aa9.04□□□□□ -0.96
Scn3a-202ENSMUST00000100069 DekQ7TNV0 380 aaKnown RBP9.04□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Zbtb4Q5F293 982 aa9.03□□□□□ -0.96
Scn3a-202ENSMUST00000100069 Ppp4r2Q0VGB7 417 aa9.03□□□□□ -0.96
Scn3a-202ENSMUST00000100069 ArxO35085 564 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms