RNA–Protein interactions for RNA: ENSMUST00000090823.7

Sema6c-202, Transcript of Semaphorin-6C, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sema6c, Length 4,029 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6c-202ENSMUST00000090823 NischQ80TM9 1593 aa25.08■■□□□ 1.61
Sema6c-202ENSMUST00000090823 Rhox8Q6VSS7 320 aa24.92■■□□□ 1.58
Sema6c-202ENSMUST00000090823 Gm35339A0A140LHH9 1649 aa24.42■■□□□ 1.5
Sema6c-202ENSMUST00000090823 Abcc9P70170 1546 aa24.2■■□□□ 1.46
Sema6c-202ENSMUST00000090823 Abcc8B2RUS7 1588 aa23.79■■□□□ 1.4
Sema6c-202ENSMUST00000090823 Ccdc136Q3TVA9 1136 aa22.6■■□□□ 1.21
Sema6c-202ENSMUST00000090823 Rpgrip1Q9EPQ2 1331 aa22.4■■□□□ 1.18
Sema6c-202ENSMUST00000090823 ScribQ80U72 1612 aa22.26■■□□□ 1.15
Sema6c-202ENSMUST00000090823 Rtl1Q7M732 1744 aa22.21■■□□□ 1.15
Sema6c-202ENSMUST00000090823 Ehmt2Q9Z148 1263 aaKnown RBP22.08■■□□□ 1.13
Sema6c-202ENSMUST00000090823 Esf1Q3V1V3 845 aaKnown RBP22.03■■□□□ 1.12
Sema6c-202ENSMUST00000090823 Dcaf1Q80TR8 1506 aa22.02■■□□□ 1.12
Sema6c-202ENSMUST00000090823 Rb1cc1Q9ESK9 1588 aa21.97■■□□□ 1.11
Sema6c-202ENSMUST00000090823 Cngb1E1AZ71 1325 aa21.97■■□□□ 1.11
Sema6c-202ENSMUST00000090823 Kdm5dQ62240 1548 aa21.92■■□□□ 1.1
Sema6c-202ENSMUST00000090823 Ccdc180J3QNE4 1664 aa21.85■■□□□ 1.09
Sema6c-202ENSMUST00000090823 NacadQ5SWP3 1504 aa21.83■■□□□ 1.08
Sema6c-202ENSMUST00000090823 Gab3Q8BSM5 595 aa21.74■■□□□ 1.07
Sema6c-202ENSMUST00000090823 Baz1aO88379 1555 aa21.65■■□□□ 1.06
Sema6c-202ENSMUST00000090823 Trim41Q5NCC3 630 aa21.64■■□□□ 1.06
Sema6c-202ENSMUST00000090823 Zcchc6Q5BLK4 1491 aaKnown RBP21.59■■□□□ 1.05
Sema6c-202ENSMUST00000090823 Acin1Q9JIX8 1338 aaKnown RBP21.52■■□□□ 1.04
Sema6c-202ENSMUST00000090823 Pcgf6Q99NA9 353 aa21.39■■□□□ 1.01
Sema6c-202ENSMUST00000090823 Zeb1Q64318 1117 aa21.32■■□□□ 1
Sema6c-202ENSMUST00000090823 Sycp2Q9CUU3 1500 aa21.31■■□□□ 1
Sema6c-202ENSMUST00000090823 Myt1lP97500 1187 aa21.27■■□□□ 1
Sema6c-202ENSMUST00000090823 Npm2Q80W85 207 aa21.25■□□□□ 0.99
Sema6c-202ENSMUST00000090823 Crybg2B7ZCC2 1516 aa21.17■□□□□ 0.98
Sema6c-202ENSMUST00000090823 Il27Q8K3I6 234 aa21.1■□□□□ 0.97
Sema6c-202ENSMUST00000090823 Smarca2Q6DIC0 1577 aa21.05■□□□□ 0.96
Sema6c-202ENSMUST00000090823 Las1lA2BE28 776 aaKnown RBP21.05■□□□□ 0.96
Sema6c-202ENSMUST00000090823 HrcG5E8J6 738 aa21.03■□□□□ 0.96
Sema6c-202ENSMUST00000090823 Supt5hO55201 1082 aaKnown RBP20.85■□□□□ 0.93
Sema6c-202ENSMUST00000090823 Ube2uB1AUC4 352 aa20.81■□□□□ 0.92
Sema6c-202ENSMUST00000090823 Brd4Q9ESU6 1400 aaKnown RBP20.8■□□□□ 0.92
Sema6c-202ENSMUST00000090823 BicraF8VPZ9 1578 aa20.78■□□□□ 0.92
Sema6c-202ENSMUST00000090823 Cecr2E9Q2Z1 1453 aa20.78■□□□□ 0.92
Sema6c-202ENSMUST00000090823 UbtfP25976 765 aaKnown RBP20.63■□□□□ 0.89
Sema6c-202ENSMUST00000090823 Neurod1Q60867 357 aa20.62■□□□□ 0.89
Sema6c-202ENSMUST00000090823 Wdr66E9Q743 1299 aa20.54■□□□□ 0.88
Sema6c-202ENSMUST00000090823 Synj1Q8CHC4 1574 aa20.51■□□□□ 0.87
Sema6c-202ENSMUST00000090823 Chic1Q8CBW7 227 aa20.47■□□□□ 0.87
Sema6c-202ENSMUST00000090823 Cep164Q5DU05 1446 aa20.45■□□□□ 0.87
Sema6c-202ENSMUST00000090823 Ap3b1Q9Z1T1 1105 aa20.45■□□□□ 0.86
Sema6c-202ENSMUST00000090823 CftrP26361 1476 aa20.44■□□□□ 0.86
Sema6c-202ENSMUST00000090823 Golga3P55937 1487 aa20.43■□□□□ 0.86
Sema6c-202ENSMUST00000090823 Smarca4Q3TKT4 1613 aaKnown RBP20.37■□□□□ 0.85
Sema6c-202ENSMUST00000090823 Rsf1E9PWW9 1441 aaKnown RBP20.34■□□□□ 0.85
Sema6c-202ENSMUST00000090823 CenpbP27790 599 aa20.33■□□□□ 0.85
Sema6c-202ENSMUST00000090823 Cttnbp2B9EJA2 1648 aa20.28■□□□□ 0.84
Sema6c-202ENSMUST00000090823 Ccdc88bQ4QRL3 1481 aa20.25■□□□□ 0.83
Sema6c-202ENSMUST00000090823 Pds5bQ4VA53 1446 aaKnown RBP20.18■□□□□ 0.82
Sema6c-202ENSMUST00000090823 Npm1Q61937 292 aaKnown RBP20.18■□□□□ 0.82
Sema6c-202ENSMUST00000090823 Atad2bE9Q166 1460 aaKnown RBP20.16■□□□□ 0.82
Sema6c-202ENSMUST00000090823 Iqgap2Q3UQ44 1575 aa20.15■□□□□ 0.82
Sema6c-202ENSMUST00000090823 Csrnp3P59055 597 aa20.14■□□□□ 0.81
Sema6c-202ENSMUST00000090823 1700123L14RikQ3V2K7 440 aa20.07■□□□□ 0.8
Sema6c-202ENSMUST00000090823 Fam50aQ9WV03 339 aaKnown RBP20.06■□□□□ 0.8
Sema6c-202ENSMUST00000090823 NefmP08553 848 aa20.05■□□□□ 0.8
Sema6c-202ENSMUST00000090823 Myt1Q8CFC2 1127 aa20.03■□□□□ 0.8
Sema6c-202ENSMUST00000090823 Ppargc1bQ8VHJ7 1014 aa20.02■□□□□ 0.79
Sema6c-202ENSMUST00000090823 Gm38655A0A286YDK6 273 aa19.99■□□□□ 0.79
Sema6c-202ENSMUST00000090823 Top2bQ64511 1612 aa19.99■□□□□ 0.79
Sema6c-202ENSMUST00000090823 Lmod2Q3UHZ5 550 aa19.98■□□□□ 0.79
Sema6c-202ENSMUST00000090823 Sall2Q9QX96 1004 aa19.96■□□□□ 0.79
Sema6c-202ENSMUST00000090823 Cdk11bP24788 784 aaKnown RBP19.95■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Ubl4bQ9CQ84 188 aa19.95■□□□□ 0.78
Sema6c-202ENSMUST00000090823 DiexfQ8BTT6 772 aaKnown RBP19.95■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Cc2d2aQ8CFW7 1633 aa19.95■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Plekhg3Q4VAC9 1341 aa19.92■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Fmn1Q05860 1466 aa19.92■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Ercc6F8VPZ5 1481 aa19.91■□□□□ 0.78
Sema6c-202ENSMUST00000090823 Nop58Q6DFW4 536 aaKnown RBP19.86■□□□□ 0.77
Sema6c-202ENSMUST00000090823 Anks4bQ8K3X6 423 aa19.86■□□□□ 0.77
Sema6c-202ENSMUST00000090823 Ifnlr1Q8CGK5 535 aa19.84■□□□□ 0.77
Sema6c-202ENSMUST00000090823 Frmpd1A2AKB4 1549 aa19.79■□□□□ 0.76
Sema6c-202ENSMUST00000090823 Kif15Q6P9L6 1387 aa19.76■□□□□ 0.75
Sema6c-202ENSMUST00000090823 Zbtb7cQ8VCZ7 619 aa19.76■□□□□ 0.75
Sema6c-202ENSMUST00000090823 Mier1Q5UAK0 511 aa19.75■□□□□ 0.75
Sema6c-202ENSMUST00000090823 Fkbp15Q6P9Q6 1216 aaKnown RBP19.73■□□□□ 0.75
Sema6c-202ENSMUST00000090823 Wdr62Q3U3T8 1523 aa19.72■□□□□ 0.75
Sema6c-202ENSMUST00000090823 Slc24a1Q91WD8 1130 aa19.68■□□□□ 0.74
Sema6c-202ENSMUST00000090823 Top2aQ01320 1528 aaKnown RBP19.66■□□□□ 0.74
Sema6c-202ENSMUST00000090823 Aplp2Q06335 707 aa19.63■□□□□ 0.73
Sema6c-202ENSMUST00000090823 Rapgef2Q8CHG7 1496 aa19.59■□□□□ 0.73
Sema6c-202ENSMUST00000090823 Cep162Q6ZQ06 1403 aa19.56■□□□□ 0.72
Sema6c-202ENSMUST00000090823 Phldb1Q6PDH0 1371 aaKnown RBP19.54■□□□□ 0.72
Sema6c-202ENSMUST00000090823 NclP09405 707 aaKnown RBP19.51■□□□□ 0.71
Sema6c-202ENSMUST00000090823 Eid3Q3V124 375 aa19.5■□□□□ 0.71
Sema6c-202ENSMUST00000090823 Ccdc18Q640L5 1455 aa19.49■□□□□ 0.71
Sema6c-202ENSMUST00000090823 Pelp1Q9DBD5 1123 aaKnown RBP19.46■□□□□ 0.71
Sema6c-202ENSMUST00000090823 Lamc3Q9R0B6 1581 aa19.45■□□□□ 0.7
Sema6c-202ENSMUST00000090823 Clip1Q922J3 1391 aa19.45■□□□□ 0.7
Sema6c-202ENSMUST00000090823 TnnQ80Z71 1560 aa19.44■□□□□ 0.7
Sema6c-202ENSMUST00000090823 Hnrnpul2Q00PI9 745 aaKnown RBP19.43■□□□□ 0.7
Sema6c-202ENSMUST00000090823 Dnajc5bQ9CQ94 199 aa19.42■□□□□ 0.7
Sema6c-202ENSMUST00000090823 Cux2P70298 1426 aa19.42■□□□□ 0.7
Sema6c-202ENSMUST00000090823 Bcl11aQ9QYE3 773 aa19.39■□□□□ 0.69
Sema6c-202ENSMUST00000090823 Ttbk1Q6PCN3 1308 aa19.36■□□□□ 0.69
Sema6c-202ENSMUST00000090823 ClspnQ80YR7 1315 aa19.36■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 219.5 ms