RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Rhox8Q6VSS7 320 aa27.45■■□□□ 1.98
Ccdc88c-202ENSMUST00000085096 Ccdc136Q3TVA9 1136 aa24.78■■□□□ 1.56
Ccdc88c-202ENSMUST00000085096 Ehmt2Q9Z148 1263 aaKnown RBP24.65■■□□□ 1.54
Ccdc88c-202ENSMUST00000085096 NischQ80TM9 1593 aa24.62■■□□□ 1.53
Ccdc88c-202ENSMUST00000085096 Cngb1E1AZ71 1325 aa24.52■■□□□ 1.52
Ccdc88c-202ENSMUST00000085096 Esf1Q3V1V3 845 aaKnown RBP24.51■■□□□ 1.51
Ccdc88c-202ENSMUST00000085096 Gab3Q8BSM5 595 aa24.06■■□□□ 1.44
Ccdc88c-202ENSMUST00000085096 Zeb1Q64318 1117 aa23.97■■□□□ 1.43
Ccdc88c-202ENSMUST00000085096 Abcc9P70170 1546 aa23.89■■□□□ 1.42
Ccdc88c-202ENSMUST00000085096 Gm35339A0A140LHH9 1649 aa23.87■■□□□ 1.41
Ccdc88c-202ENSMUST00000085096 Npm2Q80W85 207 aa23.74■■□□□ 1.39
Ccdc88c-202ENSMUST00000085096 Myt1lP97500 1187 aa23.69■■□□□ 1.38
Ccdc88c-202ENSMUST00000085096 Ube2uB1AUC4 352 aa23.63■■□□□ 1.37
Ccdc88c-202ENSMUST00000085096 Trim41Q5NCC3 630 aa23.46■■□□□ 1.35
Ccdc88c-202ENSMUST00000085096 Il27Q8K3I6 234 aa23.41■■□□□ 1.34
Ccdc88c-202ENSMUST00000085096 Wdr66E9Q743 1299 aa23.13■■□□□ 1.29
Ccdc88c-202ENSMUST00000085096 Zcchc6Q5BLK4 1491 aaKnown RBP23.05■■□□□ 1.28
Ccdc88c-202ENSMUST00000085096 Ap3b1Q9Z1T1 1105 aa22.9■■□□□ 1.26
Ccdc88c-202ENSMUST00000085096 UbtfP25976 765 aaKnown RBP22.84■■□□□ 1.25
Ccdc88c-202ENSMUST00000085096 Las1lA2BE28 776 aaKnown RBP22.75■■□□□ 1.23
Ccdc88c-202ENSMUST00000085096 Rpgrip1Q9EPQ2 1331 aa22.51■■□□□ 1.19
Ccdc88c-202ENSMUST00000085096 Ifnlr1Q8CGK5 535 aa22.5■■□□□ 1.19
Ccdc88c-202ENSMUST00000085096 Abcc8B2RUS7 1588 aa22.45■■□□□ 1.18
Ccdc88c-202ENSMUST00000085096 Zbtb7cQ8VCZ7 619 aa22.3■■□□□ 1.16
Ccdc88c-202ENSMUST00000085096 Slc24a1Q91WD8 1130 aa22.28■■□□□ 1.16
Ccdc88c-202ENSMUST00000085096 Fam50aQ9WV03 339 aaKnown RBP22.23■■□□□ 1.15
Ccdc88c-202ENSMUST00000085096 Neurod1Q60867 357 aa22.23■■□□□ 1.15
Ccdc88c-202ENSMUST00000085096 Plppr3Q7TPB0 716 aa22.21■■□□□ 1.15
Ccdc88c-202ENSMUST00000085096 Ccdc180J3QNE4 1664 aa22.17■■□□□ 1.14
Ccdc88c-202ENSMUST00000085096 Npm1Q61937 292 aaKnown RBP22.13■■□□□ 1.13
Ccdc88c-202ENSMUST00000085096 Ppargc1bQ8VHJ7 1014 aa22.09■■□□□ 1.13
Ccdc88c-202ENSMUST00000085096 Lmod2Q3UHZ5 550 aa22.03■■□□□ 1.12
Ccdc88c-202ENSMUST00000085096 Fkbp15Q6P9Q6 1216 aaKnown RBP22.01■■□□□ 1.11
Ccdc88c-202ENSMUST00000085096 Rtl1Q7M732 1744 aa22■■□□□ 1.11
Ccdc88c-202ENSMUST00000085096 Os9Q8K2C7 672 aa21.95■■□□□ 1.11
Ccdc88c-202ENSMUST00000085096 Ubl4bQ9CQ84 188 aa21.83■■□□□ 1.09
Ccdc88c-202ENSMUST00000085096 Pelp1Q9DBD5 1123 aaKnown RBP21.83■■□□□ 1.08
Ccdc88c-202ENSMUST00000085096 Rb1cc1Q9ESK9 1588 aa21.81■■□□□ 1.08
Ccdc88c-202ENSMUST00000085096 Plekhg3Q4VAC9 1341 aa21.8■■□□□ 1.08
Ccdc88c-202ENSMUST00000085096 Hnrnpul2Q00PI9 745 aaKnown RBP21.76■■□□□ 1.07
Ccdc88c-202ENSMUST00000085096 Chic1Q8CBW7 227 aa21.76■■□□□ 1.07
Ccdc88c-202ENSMUST00000085096 Zbtb4Q5F293 982 aa21.73■■□□□ 1.07
Ccdc88c-202ENSMUST00000085096 Ttbk1Q6PCN3 1308 aa21.73■■□□□ 1.07
Ccdc88c-202ENSMUST00000085096 Gm13697A2AK42 830 aa21.7■■□□□ 1.06
Ccdc88c-202ENSMUST00000085096 HrcG5E8J6 738 aa21.7■■□□□ 1.06
Ccdc88c-202ENSMUST00000085096 Acin1Q9JIX8 1338 aaKnown RBP21.66■■□□□ 1.06
Ccdc88c-202ENSMUST00000085096 NclP09405 707 aaKnown RBP21.61■■□□□ 1.05
Ccdc88c-202ENSMUST00000085096 Erich6D3Z6S9 713 aa21.6■■□□□ 1.05
Ccdc88c-202ENSMUST00000085096 Prdm10Q3UTQ7 1184 aa21.51■■□□□ 1.03
Ccdc88c-202ENSMUST00000085096 Atp1b4Q99ME6 356 aa21.51■■□□□ 1.03
Ccdc88c-202ENSMUST00000085096 NefmP08553 848 aa21.5■■□□□ 1.03
Ccdc88c-202ENSMUST00000085096 Eif5bQ05D44 1216 aaKnown RBP21.41■■□□□ 1.02
Ccdc88c-202ENSMUST00000085096 Mier1Q5UAK0 511 aa21.37■■□□□ 1.01
Ccdc88c-202ENSMUST00000085096 NacadQ5SWP3 1504 aa21.37■■□□□ 1.01
Ccdc88c-202ENSMUST00000085096 Brd4Q9ESU6 1400 aaKnown RBP21.36■■□□□ 1.01
Ccdc88c-202ENSMUST00000085096 Mapk8ip2Q9ERE9 830 aa21.31■■□□□ 1
Ccdc88c-202ENSMUST00000085096 Gm13695A2AK44 830 aa21.25■□□□□ 0.99
Ccdc88c-202ENSMUST00000085096 Eid3Q3V124 375 aa21.2■□□□□ 0.98
Ccdc88c-202ENSMUST00000085096 TonslQ6NZL6 1363 aa21.19■□□□□ 0.98
Ccdc88c-202ENSMUST00000085096 Kdm5dQ62240 1548 aa21.17■□□□□ 0.98
Ccdc88c-202ENSMUST00000085096 Dcaf1Q80TR8 1506 aa21.15■□□□□ 0.98
Ccdc88c-202ENSMUST00000085096 Chic2Q9D9G3 165 aa21.15■□□□□ 0.98
Ccdc88c-202ENSMUST00000085096 NrdcQ8BHG1 1161 aa21.14■□□□□ 0.97
Ccdc88c-202ENSMUST00000085096 Ercc6F8VPZ5 1481 aa21.09■□□□□ 0.97
Ccdc88c-202ENSMUST00000085096 Kif15Q6P9L6 1387 aa21.07■□□□□ 0.96
Ccdc88c-202ENSMUST00000085096 Clip1Q922J3 1391 aa21.06■□□□□ 0.96
Ccdc88c-202ENSMUST00000085096 Safb2Q80YR5 991 aaKnown RBP21.02■□□□□ 0.96
Ccdc88c-202ENSMUST00000085096 Arhgap27A2AB59 869 aa20.98■□□□□ 0.95
Ccdc88c-202ENSMUST00000085096 Anp32bQ9EST5 272 aaKnown RBP20.97■□□□□ 0.95
Ccdc88c-202ENSMUST00000085096 Baz1aO88379 1555 aa20.96■□□□□ 0.95
Ccdc88c-202ENSMUST00000085096 Stra8P70278 393 aa20.95■□□□□ 0.94
Ccdc88c-202ENSMUST00000085096 Supt5hO55201 1082 aaKnown RBP20.93■□□□□ 0.94
Ccdc88c-202ENSMUST00000085096 P3h3Q8CG70 732 aa20.93■□□□□ 0.94
Ccdc88c-202ENSMUST00000085096 Cdk11bP24788 784 aaKnown RBP20.9■□□□□ 0.94
Ccdc88c-202ENSMUST00000085096 Rangap1P46061 589 aaKnown RBP20.87■□□□□ 0.93
Ccdc88c-202ENSMUST00000085096 Nop58Q6DFW4 536 aaKnown RBP20.8■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 Polr3glQ8R0C0 218 aa20.8■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 Pcgf6Q99NA9 353 aa20.79■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 Rsf1E9PWW9 1441 aaKnown RBP20.78■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 Nlrp6Q91WS2 869 aa20.78■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 BlmO88700 1416 aa20.77■□□□□ 0.92
Ccdc88c-202ENSMUST00000085096 MyclP10166 368 aa20.74■□□□□ 0.91
Ccdc88c-202ENSMUST00000085096 Cep164Q5DU05 1446 aa20.69■□□□□ 0.9
Ccdc88c-202ENSMUST00000085096 NeflP08551 543 aa20.68■□□□□ 0.9
Ccdc88c-202ENSMUST00000085096 Ccdc18Q640L5 1455 aa20.64■□□□□ 0.89
Ccdc88c-202ENSMUST00000085096 Ppp1r18Q8BQ30 594 aa20.61■□□□□ 0.89
Ccdc88c-202ENSMUST00000085096 Setd5Q5XJV7 1441 aa20.6■□□□□ 0.89
Ccdc88c-202ENSMUST00000085096 Golga3P55937 1487 aa20.56■□□□□ 0.88
Ccdc88c-202ENSMUST00000085096 CenpbP27790 599 aa20.54■□□□□ 0.88
Ccdc88c-202ENSMUST00000085096 Amer1Q7TS75 1132 aa20.53■□□□□ 0.88
Ccdc88c-202ENSMUST00000085096 Arid3cA6PWV5 409 aa20.48■□□□□ 0.87
Ccdc88c-202ENSMUST00000085096 Csrnp3P59055 597 aa20.46■□□□□ 0.87
Ccdc88c-202ENSMUST00000085096 AknaQ80VW7 1404 aa20.46■□□□□ 0.87
Ccdc88c-202ENSMUST00000085096 Irx6Q9ER75 438 aa20.46■□□□□ 0.87
Ccdc88c-202ENSMUST00000085096 Rgl3Q3UYI5 709 aa20.45■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 Pds5bQ4VA53 1446 aaKnown RBP20.45■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 NgefQ8CHT1 710 aa20.44■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 Kdm2aP59997 1161 aa20.43■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 Sycp2Q9CUU3 1500 aa20.43■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 Rrp7aQ9D1C9 280 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms