RNA–Protein interactions for RNA: ENSMUST00000079582.4

Erc1-202, Transcript of ELKS/Rab6-interacting/CAST family member 1, mousemouse

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Gene Erc1, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Erc1-202ENSMUST00000079582 NischQ80TM9 1593 aa34.26■■■■□ 3.07
Erc1-202ENSMUST00000079582 Rpgrip1Q9EPQ2 1331 aa34.03■■■■□ 3.04
Erc1-202ENSMUST00000079582 Gm35339A0A140LHH9 1649 aa33.87■■■■□ 3.01
Erc1-202ENSMUST00000079582 Rtl1Q7M732 1744 aa33.22■■■□□ 2.91
Erc1-202ENSMUST00000079582 Abcc9P70170 1546 aa33.19■■■□□ 2.9
Erc1-202ENSMUST00000079582 Ccdc180J3QNE4 1664 aa32.8■■■□□ 2.84
Erc1-202ENSMUST00000079582 Abcc8B2RUS7 1588 aa32.71■■■□□ 2.83
Erc1-202ENSMUST00000079582 Acin1Q9JIX8 1338 aaKnown RBP32.46■■■□□ 2.79
Erc1-202ENSMUST00000079582 Pcgf6Q99NA9 353 aa31.88■■■□□ 2.69
Erc1-202ENSMUST00000079582 Rhox8Q6VSS7 320 aa31.71■■■□□ 2.67
Erc1-202ENSMUST00000079582 Dcaf1Q80TR8 1506 aa31.43■■■□□ 2.62
Erc1-202ENSMUST00000079582 Zcchc6Q5BLK4 1491 aaKnown RBP31.28■■■□□ 2.6
Erc1-202ENSMUST00000079582 Trim41Q5NCC3 630 aa31.06■■■□□ 2.56
Erc1-202ENSMUST00000079582 Las1lA2BE28 776 aaKnown RBP31.03■■■□□ 2.56
Erc1-202ENSMUST00000079582 HrcG5E8J6 738 aa30.95■■■□□ 2.54
Erc1-202ENSMUST00000079582 ScribQ80U72 1612 aa30.83■■■□□ 2.53
Erc1-202ENSMUST00000079582 Ehmt2Q9Z148 1263 aaKnown RBP30.78■■■□□ 2.52
Erc1-202ENSMUST00000079582 Supt5hO55201 1082 aaKnown RBP30.73■■■□□ 2.51
Erc1-202ENSMUST00000079582 Neurod1Q60867 357 aa30.73■■■□□ 2.51
Erc1-202ENSMUST00000079582 Myt1Q8CFC2 1127 aa30.72■■■□□ 2.51
Erc1-202ENSMUST00000079582 CenpbP27790 599 aa30.24■■■□□ 2.43
Erc1-202ENSMUST00000079582 Kdm5dQ62240 1548 aa30.13■■■□□ 2.41
Erc1-202ENSMUST00000079582 1700123L14RikQ3V2K7 440 aa30.12■■■□□ 2.41
Erc1-202ENSMUST00000079582 Anks4bQ8K3X6 423 aa30.07■■■□□ 2.4
Erc1-202ENSMUST00000079582 Cngb1E1AZ71 1325 aa29.96■■■□□ 2.39
Erc1-202ENSMUST00000079582 Rb1cc1Q9ESK9 1588 aa29.96■■■□□ 2.39
Erc1-202ENSMUST00000079582 NacadQ5SWP3 1504 aa29.94■■■□□ 2.38
Erc1-202ENSMUST00000079582 NefmP08553 848 aa29.8■■■□□ 2.36
Erc1-202ENSMUST00000079582 Aplp2Q06335 707 aa29.78■■■□□ 2.36
Erc1-202ENSMUST00000079582 Csrnp3P59055 597 aa29.68■■■□□ 2.34
Erc1-202ENSMUST00000079582 Zeb1Q64318 1117 aa29.56■■■□□ 2.32
Erc1-202ENSMUST00000079582 Baz1aO88379 1555 aa29.56■■■□□ 2.32
Erc1-202ENSMUST00000079582 DiexfQ8BTT6 772 aaKnown RBP29.56■■■□□ 2.32
Erc1-202ENSMUST00000079582 Sall2Q9QX96 1004 aa29.53■■■□□ 2.32
Erc1-202ENSMUST00000079582 Cep164Q5DU05 1446 aa29.52■■■□□ 2.32
Erc1-202ENSMUST00000079582 Sycp2Q9CUU3 1500 aa29.32■■■□□ 2.28
Erc1-202ENSMUST00000079582 Cdk11bP24788 784 aaKnown RBP29.18■■■□□ 2.26
Erc1-202ENSMUST00000079582 Ccdc136Q3TVA9 1136 aa29.16■■■□□ 2.26
Erc1-202ENSMUST00000079582 Bcl11aQ9QYE3 773 aa29.11■■■□□ 2.25
Erc1-202ENSMUST00000079582 Crybg2B7ZCC2 1516 aa29.09■■■□□ 2.25
Erc1-202ENSMUST00000079582 Mier1Q5UAK0 511 aa29.06■■■□□ 2.24
Erc1-202ENSMUST00000079582 Nop58Q6DFW4 536 aaKnown RBP29■■■□□ 2.23
Erc1-202ENSMUST00000079582 ClspnQ80YR7 1315 aa28.88■■■□□ 2.21
Erc1-202ENSMUST00000079582 Smarca2Q6DIC0 1577 aa28.83■■■□□ 2.21
Erc1-202ENSMUST00000079582 BicraF8VPZ9 1578 aa28.78■■■□□ 2.2
Erc1-202ENSMUST00000079582 Wdr66E9Q743 1299 aa28.69■■■□□ 2.18
Erc1-202ENSMUST00000079582 Aebp2Q9Z248 504 aaKnown RBP28.6■■■□□ 2.17
Erc1-202ENSMUST00000079582 Tnnt3Q9QZ47 272 aa28.48■■■□□ 2.15
Erc1-202ENSMUST00000079582 Fam71e1A1L3C1 212 aa28.47■■■□□ 2.15
Erc1-202ENSMUST00000079582 Cecr2E9Q2Z1 1453 aa28.45■■■□□ 2.14
Erc1-202ENSMUST00000079582 Gm38655A0A286YDK6 273 aa28.43■■■□□ 2.14
Erc1-202ENSMUST00000079582 Rsf1E9PWW9 1441 aaKnown RBP28.37■■■□□ 2.13
Erc1-202ENSMUST00000079582 Rtl5Q5DTT4 599 aa28.33■■■□□ 2.13
Erc1-202ENSMUST00000079582 Gab3Q8BSM5 595 aa28.16■■■□□ 2.1
Erc1-202ENSMUST00000079582 Chic1Q8CBW7 227 aa28.16■■■□□ 2.1
Erc1-202ENSMUST00000079582 Brd4Q9ESU6 1400 aaKnown RBP28.12■■■□□ 2.09
Erc1-202ENSMUST00000079582 TonslQ6NZL6 1363 aa28.11■■■□□ 2.09
Erc1-202ENSMUST00000079582 PrkcshO08795 521 aa28.1■■■□□ 2.09
Erc1-202ENSMUST00000079582 Anp32aO35381 247 aa28.07■■■□□ 2.08
Erc1-202ENSMUST00000079582 Hnrnpul2Q00PI9 745 aaKnown RBP28.02■■■□□ 2.08
Erc1-202ENSMUST00000079582 Synj1Q8CHC4 1574 aa28.02■■■□□ 2.08
Erc1-202ENSMUST00000079582 Pelp1Q9DBD5 1123 aaKnown RBP27.97■■■□□ 2.07
Erc1-202ENSMUST00000079582 Amer1Q7TS75 1132 aa27.96■■■□□ 2.07
Erc1-202ENSMUST00000079582 SafbD3YXK2 937 aaKnown RBP27.93■■■□□ 2.06
Erc1-202ENSMUST00000079582 Mapk8ip2Q9ERE9 830 aa27.92■■■□□ 2.06
Erc1-202ENSMUST00000079582 Ccdc88bQ4QRL3 1481 aa27.91■■■□□ 2.06
Erc1-202ENSMUST00000079582 CftrP26361 1476 aa27.91■■■□□ 2.06
Erc1-202ENSMUST00000079582 Smarca4Q3TKT4 1613 aaKnown RBP27.9■■■□□ 2.06
Erc1-202ENSMUST00000079582 UbtfP25976 765 aaKnown RBP27.89■■■□□ 2.05
Erc1-202ENSMUST00000079582 Ppargc1bQ8VHJ7 1014 aa27.85■■■□□ 2.05
Erc1-202ENSMUST00000079582 Golga3P55937 1487 aa27.81■■■□□ 2.04
Erc1-202ENSMUST00000079582 Ifnlr1Q8CGK5 535 aa27.8■■■□□ 2.04
Erc1-202ENSMUST00000079582 Esf1Q3V1V3 845 aaKnown RBP27.75■■■□□ 2.03
Erc1-202ENSMUST00000079582 Stra8P70278 393 aa27.71■■■□□ 2.03
Erc1-202ENSMUST00000079582 Cttnbp2B9EJA2 1648 aa27.71■■■□□ 2.03
Erc1-202ENSMUST00000079582 Atad2bE9Q166 1460 aaKnown RBP27.63■■■□□ 2.01
Erc1-202ENSMUST00000079582 Iqgap2Q3UQ44 1575 aa27.62■■■□□ 2.01
Erc1-202ENSMUST00000079582 Pds5bQ4VA53 1446 aaKnown RBP27.6■■■□□ 2.01
Erc1-202ENSMUST00000079582 Znf710Q3U288 666 aa27.55■■■□□ 2
Erc1-202ENSMUST00000079582 Rapgef2Q8CHG7 1496 aa27.5■■□□□ 1.99
Erc1-202ENSMUST00000079582 Ncapd3Q6ZQK0 1506 aa27.45■■□□□ 1.98
Erc1-202ENSMUST00000079582 Nolc1E9Q5C9 702 aaKnown RBP27.4■■□□□ 1.98
Erc1-202ENSMUST00000079582 Hdac5Q9Z2V6 1113 aa27.4■■□□□ 1.98
Erc1-202ENSMUST00000079582 Ap3b1Q9Z1T1 1105 aa27.38■■□□□ 1.97
Erc1-202ENSMUST00000079582 Top2bQ64511 1612 aa27.37■■□□□ 1.97
Erc1-202ENSMUST00000079582 Calr4Q3TQS0 420 aa27.36■■□□□ 1.97
Erc1-202ENSMUST00000079582 Ccdc9Q8VC31 543 aaKnown RBP27.36■■□□□ 1.97
Erc1-202ENSMUST00000079582 Supt16hQ920B9 1047 aa27.36■■□□□ 1.97
Erc1-202ENSMUST00000079582 Rpap1Q80TE0 1409 aa27.23■■□□□ 1.95
Erc1-202ENSMUST00000079582 Frmpd1A2AKB4 1549 aa27.2■■□□□ 1.94
Erc1-202ENSMUST00000079582 Upf2A2AT37 1269 aaKnown RBP27.19■■□□□ 1.94
Erc1-202ENSMUST00000079582 Cc2d2aQ8CFW7 1633 aa27.19■■□□□ 1.94
Erc1-202ENSMUST00000079582 Cep162Q6ZQ06 1403 aa27.17■■□□□ 1.94
Erc1-202ENSMUST00000079582 Wdr62Q3U3T8 1523 aa27.15■■□□□ 1.94
Erc1-202ENSMUST00000079582 Ccdc27Q3V036 639 aa27.14■■□□□ 1.94
Erc1-202ENSMUST00000079582 Fgd1P52734 960 aa27.12■■□□□ 1.93
Erc1-202ENSMUST00000079582 Washc2Q6PGL7 1334 aa27.12■■□□□ 1.93
Erc1-202ENSMUST00000079582 Kdm5bQ80Y84 1544 aa27.12■■□□□ 1.93
Erc1-202ENSMUST00000079582 Ercc6F8VPZ5 1481 aa27.09■■□□□ 1.93
Erc1-202ENSMUST00000079582 NrdcQ8BHG1 1161 aa27.08■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms