RNA–Protein interactions for RNA: ENSMUST00000073104.10

Ppp4r1-201, Transcript of Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ppp4r1, Length 3,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1-201ENSMUST00000073104 Rhox8Q6VSS7 320 aa20.23■□□□□ 0.83
Ppp4r1-201ENSMUST00000073104 NischQ80TM9 1593 aa20.22■□□□□ 0.83
Ppp4r1-201ENSMUST00000073104 Abcc9P70170 1546 aa19.39■□□□□ 0.7
Ppp4r1-201ENSMUST00000073104 Ehmt2Q9Z148 1263 aaKnown RBP19.13■□□□□ 0.65
Ppp4r1-201ENSMUST00000073104 Gm35339A0A140LHH9 1649 aa18.96■□□□□ 0.63
Ppp4r1-201ENSMUST00000073104 Abcc8B2RUS7 1588 aa18.94■□□□□ 0.62
Ppp4r1-201ENSMUST00000073104 Ccdc136Q3TVA9 1136 aa18.71■□□□□ 0.59
Ppp4r1-201ENSMUST00000073104 Ccdc180J3QNE4 1664 aa18.64■□□□□ 0.57
Ppp4r1-201ENSMUST00000073104 Rpgrip1Q9EPQ2 1331 aa18.61■□□□□ 0.57
Ppp4r1-201ENSMUST00000073104 Rtl1Q7M732 1744 aa18.6■□□□□ 0.57
Ppp4r1-201ENSMUST00000073104 Acin1Q9JIX8 1338 aaKnown RBP18.41■□□□□ 0.54
Ppp4r1-201ENSMUST00000073104 Trim41Q5NCC3 630 aa18.18■□□□□ 0.5
Ppp4r1-201ENSMUST00000073104 Zcchc6Q5BLK4 1491 aaKnown RBP18.13■□□□□ 0.49
Ppp4r1-201ENSMUST00000073104 Pcgf6Q99NA9 353 aa18.07■□□□□ 0.48
Ppp4r1-201ENSMUST00000073104 HrcG5E8J6 738 aa18.06■□□□□ 0.48
Ppp4r1-201ENSMUST00000073104 Gab3Q8BSM5 595 aa17.96■□□□□ 0.47
Ppp4r1-201ENSMUST00000073104 Cngb1E1AZ71 1325 aa17.84■□□□□ 0.45
Ppp4r1-201ENSMUST00000073104 Zeb1Q64318 1117 aa17.83■□□□□ 0.44
Ppp4r1-201ENSMUST00000073104 Supt5hO55201 1082 aaKnown RBP17.81■□□□□ 0.44
Ppp4r1-201ENSMUST00000073104 Dcaf1Q80TR8 1506 aa17.77■□□□□ 0.44
Ppp4r1-201ENSMUST00000073104 Rb1cc1Q9ESK9 1588 aa17.75■□□□□ 0.43
Ppp4r1-201ENSMUST00000073104 Chic1Q8CBW7 227 aa17.53■□□□□ 0.4
Ppp4r1-201ENSMUST00000073104 ScribQ80U72 1612 aa17.46■□□□□ 0.39
Ppp4r1-201ENSMUST00000073104 Esf1Q3V1V3 845 aaKnown RBP17.43■□□□□ 0.38
Ppp4r1-201ENSMUST00000073104 Baz1aO88379 1555 aa17.4■□□□□ 0.38
Ppp4r1-201ENSMUST00000073104 Neurod1Q60867 357 aa17.4■□□□□ 0.38
Ppp4r1-201ENSMUST00000073104 Kdm5dQ62240 1548 aa17.37■□□□□ 0.37
Ppp4r1-201ENSMUST00000073104 Mier1Q5UAK0 511 aa17.36■□□□□ 0.37
Ppp4r1-201ENSMUST00000073104 Cep164Q5DU05 1446 aa17.36■□□□□ 0.37
Ppp4r1-201ENSMUST00000073104 Ppargc1bQ8VHJ7 1014 aa17.36■□□□□ 0.37
Ppp4r1-201ENSMUST00000073104 Wdr66E9Q743 1299 aa17.33■□□□□ 0.36
Ppp4r1-201ENSMUST00000073104 UbtfP25976 765 aaKnown RBP17.32■□□□□ 0.36
Ppp4r1-201ENSMUST00000073104 Myt1lP97500 1187 aa17.23■□□□□ 0.35
Ppp4r1-201ENSMUST00000073104 Sall2Q9QX96 1004 aa17.23■□□□□ 0.35
Ppp4r1-201ENSMUST00000073104 Rsf1E9PWW9 1441 aaKnown RBP17.21■□□□□ 0.35
Ppp4r1-201ENSMUST00000073104 NefmP08553 848 aa17.19■□□□□ 0.34
Ppp4r1-201ENSMUST00000073104 NacadQ5SWP3 1504 aa17.11■□□□□ 0.33
Ppp4r1-201ENSMUST00000073104 Ccdc88bQ4QRL3 1481 aa17.07■□□□□ 0.32
Ppp4r1-201ENSMUST00000073104 Las1lA2BE28 776 aaKnown RBP17.06■□□□□ 0.32
Ppp4r1-201ENSMUST00000073104 Aebp2Q9Z248 504 aaKnown RBP16.97■□□□□ 0.31
Ppp4r1-201ENSMUST00000073104 Npm2Q80W85 207 aa16.96■□□□□ 0.31
Ppp4r1-201ENSMUST00000073104 Smarca2Q6DIC0 1577 aa16.96■□□□□ 0.31
Ppp4r1-201ENSMUST00000073104 Csrnp3P59055 597 aa16.93■□□□□ 0.3
Ppp4r1-201ENSMUST00000073104 Brd4Q9ESU6 1400 aaKnown RBP16.91■□□□□ 0.3
Ppp4r1-201ENSMUST00000073104 Cecr2E9Q2Z1 1453 aa16.9■□□□□ 0.3
Ppp4r1-201ENSMUST00000073104 Gm38655A0A286YDK6 273 aa16.87■□□□□ 0.29
Ppp4r1-201ENSMUST00000073104 Plekhg3Q4VAC9 1341 aa16.84■□□□□ 0.29
Ppp4r1-201ENSMUST00000073104 Golga3P55937 1487 aa16.83■□□□□ 0.29
Ppp4r1-201ENSMUST00000073104 Nop58Q6DFW4 536 aaKnown RBP16.82■□□□□ 0.28
Ppp4r1-201ENSMUST00000073104 Cdk11bP24788 784 aaKnown RBP16.81■□□□□ 0.28
Ppp4r1-201ENSMUST00000073104 1700123L14RikQ3V2K7 440 aa16.77■□□□□ 0.28
Ppp4r1-201ENSMUST00000073104 Ap3b1Q9Z1T1 1105 aa16.76■□□□□ 0.27
Ppp4r1-201ENSMUST00000073104 Sycp2Q9CUU3 1500 aa16.71■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Anks4bQ8K3X6 423 aa16.71■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Eid3Q3V124 375 aa16.69■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 TonslQ6NZL6 1363 aa16.68■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Crybg2B7ZCC2 1516 aa16.68■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Il27Q8K3I6 234 aa16.68■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Synj1Q8CHC4 1574 aa16.67■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 Mapk8ip2Q9ERE9 830 aa16.65■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 ClspnQ80YR7 1315 aa16.65■□□□□ 0.26
Ppp4r1-201ENSMUST00000073104 CftrP26361 1476 aa16.53■□□□□ 0.24
Ppp4r1-201ENSMUST00000073104 Clip1Q922J3 1391 aa16.52■□□□□ 0.23
Ppp4r1-201ENSMUST00000073104 CenpbP27790 599 aa16.45■□□□□ 0.22
Ppp4r1-201ENSMUST00000073104 Fam50aQ9WV03 339 aaKnown RBP16.41■□□□□ 0.22
Ppp4r1-201ENSMUST00000073104 Rapgef2Q8CHG7 1496 aa16.41■□□□□ 0.22
Ppp4r1-201ENSMUST00000073104 Cep162Q6ZQ06 1403 aa16.4■□□□□ 0.22
Ppp4r1-201ENSMUST00000073104 Cc2d2aQ8CFW7 1633 aa16.36■□□□□ 0.21
Ppp4r1-201ENSMUST00000073104 Lmod2Q3UHZ5 550 aa16.35■□□□□ 0.21
Ppp4r1-201ENSMUST00000073104 Slc24a1Q91WD8 1130 aa16.35■□□□□ 0.21
Ppp4r1-201ENSMUST00000073104 Ube2uB1AUC4 352 aa16.33■□□□□ 0.2
Ppp4r1-201ENSMUST00000073104 SafbD3YXK2 937 aaKnown RBP16.32■□□□□ 0.2
Ppp4r1-201ENSMUST00000073104 Aplp2Q06335 707 aa16.3■□□□□ 0.2
Ppp4r1-201ENSMUST00000073104 NclP09405 707 aaKnown RBP16.29■□□□□ 0.2
Ppp4r1-201ENSMUST00000073104 BicraF8VPZ9 1578 aa16.29■□□□□ 0.2
Ppp4r1-201ENSMUST00000073104 Hnrnpul2Q00PI9 745 aaKnown RBP16.26■□□□□ 0.19
Ppp4r1-201ENSMUST00000073104 Fmn1Q05860 1466 aa16.23■□□□□ 0.19
Ppp4r1-201ENSMUST00000073104 Top2bQ64511 1612 aa16.21■□□□□ 0.19
Ppp4r1-201ENSMUST00000073104 Cttnbp2B9EJA2 1648 aa16.18■□□□□ 0.18
Ppp4r1-201ENSMUST00000073104 Setd5Q5XJV7 1441 aa16.15■□□□□ 0.18
Ppp4r1-201ENSMUST00000073104 Top2aQ01320 1528 aaKnown RBP16.11■□□□□ 0.17
Ppp4r1-201ENSMUST00000073104 Fam71e1A1L3C1 212 aa16.1■□□□□ 0.17
Ppp4r1-201ENSMUST00000073104 BlmO88700 1416 aa16.09■□□□□ 0.17
Ppp4r1-201ENSMUST00000073104 Smarca4Q3TKT4 1613 aaKnown RBP16.09■□□□□ 0.17
Ppp4r1-201ENSMUST00000073104 Eea1Q8BL66 1411 aa16.06■□□□□ 0.16
Ppp4r1-201ENSMUST00000073104 Eif5bQ05D44 1216 aaKnown RBP16.03■□□□□ 0.16
Ppp4r1-201ENSMUST00000073104 Ncapd3Q6ZQK0 1506 aa16.02■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 Tnnt3Q9QZ47 272 aa16.01■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 Hspa5P20029 655 aaKnown RBP16■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 PtprkP35822 1457 aa16■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 Kif15Q6P9L6 1387 aa15.98■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 Chic2Q9D9G3 165 aa15.97■□□□□ 0.15
Ppp4r1-201ENSMUST00000073104 Arap1Q4LDD4 1452 aa15.95■□□□□ 0.14
Ppp4r1-201ENSMUST00000073104 Sin3aQ60520 1274 aaKnown RBP15.94■□□□□ 0.14
Ppp4r1-201ENSMUST00000073104 Arhgap35Q91YM2 1499 aa15.93■□□□□ 0.14
Ppp4r1-201ENSMUST00000073104 Iqgap2Q3UQ44 1575 aa15.91■□□□□ 0.14
Ppp4r1-201ENSMUST00000073104 Stra8P70278 393 aa15.9■□□□□ 0.14
Ppp4r1-201ENSMUST00000073104 Npm1Q61937 292 aaKnown RBP15.86■□□□□ 0.13
Ppp4r1-201ENSMUST00000073104 Baz1bQ9Z277 1479 aa15.84■□□□□ 0.13
Ppp4r1-201ENSMUST00000073104 Myt1Q8CFC2 1127 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms