RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Rhox8Q6VSS7 320 aa32.09■■■□□ 2.73
Sdc3-201ENSMUST00000070478 Ccdc136Q3TVA9 1136 aa28.6■■■□□ 2.17
Sdc3-201ENSMUST00000070478 NischQ80TM9 1593 aa28.48■■■□□ 2.15
Sdc3-201ENSMUST00000070478 Ehmt2Q9Z148 1263 aaKnown RBP28.38■■■□□ 2.13
Sdc3-201ENSMUST00000070478 Esf1Q3V1V3 845 aaKnown RBP28.37■■■□□ 2.13
Sdc3-201ENSMUST00000070478 Rpgrip1Q9EPQ2 1331 aa28.32■■■□□ 2.12
Sdc3-201ENSMUST00000070478 Cngb1E1AZ71 1325 aa28.25■■■□□ 2.11
Sdc3-201ENSMUST00000070478 Trim41Q5NCC3 630 aa27.98■■■□□ 2.07
Sdc3-201ENSMUST00000070478 Gab3Q8BSM5 595 aa27.85■■■□□ 2.05
Sdc3-201ENSMUST00000070478 Zeb1Q64318 1117 aa27.7■■■□□ 2.03
Sdc3-201ENSMUST00000070478 Npm2Q80W85 207 aa27.62■■■□□ 2.01
Sdc3-201ENSMUST00000070478 Ube2uB1AUC4 352 aa27.49■■□□□ 1.99
Sdc3-201ENSMUST00000070478 Las1lA2BE28 776 aaKnown RBP27.42■■□□□ 1.98
Sdc3-201ENSMUST00000070478 Myt1lP97500 1187 aa27.4■■□□□ 1.98
Sdc3-201ENSMUST00000070478 Wdr66E9Q743 1299 aa27.4■■□□□ 1.98
Sdc3-201ENSMUST00000070478 Abcc9P70170 1546 aa26.76■■□□□ 1.87
Sdc3-201ENSMUST00000070478 UbtfP25976 765 aaKnown RBP26.71■■□□□ 1.87
Sdc3-201ENSMUST00000070478 Il27Q8K3I6 234 aa26.71■■□□□ 1.87
Sdc3-201ENSMUST00000070478 HrcG5E8J6 738 aa26.59■■□□□ 1.85
Sdc3-201ENSMUST00000070478 Zcchc6Q5BLK4 1491 aaKnown RBP26.57■■□□□ 1.84
Sdc3-201ENSMUST00000070478 Acin1Q9JIX8 1338 aaKnown RBP26.54■■□□□ 1.84
Sdc3-201ENSMUST00000070478 NefmP08553 848 aa26.49■■□□□ 1.83
Sdc3-201ENSMUST00000070478 Ccdc180J3QNE4 1664 aa26.47■■□□□ 1.83
Sdc3-201ENSMUST00000070478 Gm35339A0A140LHH9 1649 aa26.4■■□□□ 1.82
Sdc3-201ENSMUST00000070478 Pelp1Q9DBD5 1123 aaKnown RBP26.25■■□□□ 1.79
Sdc3-201ENSMUST00000070478 Rtl1Q7M732 1744 aa26.12■■□□□ 1.77
Sdc3-201ENSMUST00000070478 Ap3b1Q9Z1T1 1105 aa26.08■■□□□ 1.77
Sdc3-201ENSMUST00000070478 Abcc8B2RUS7 1588 aa26.01■■□□□ 1.75
Sdc3-201ENSMUST00000070478 Fam50aQ9WV03 339 aaKnown RBP25.98■■□□□ 1.75
Sdc3-201ENSMUST00000070478 Slc24a1Q91WD8 1130 aa25.96■■□□□ 1.75
Sdc3-201ENSMUST00000070478 Stra8P70278 393 aa25.94■■□□□ 1.74
Sdc3-201ENSMUST00000070478 Neurod1Q60867 357 aa25.72■■□□□ 1.71
Sdc3-201ENSMUST00000070478 Npm1Q61937 292 aaKnown RBP25.71■■□□□ 1.71
Sdc3-201ENSMUST00000070478 CenpbP27790 599 aa25.66■■□□□ 1.7
Sdc3-201ENSMUST00000070478 NclP09405 707 aaKnown RBP25.65■■□□□ 1.7
Sdc3-201ENSMUST00000070478 Cdk11bP24788 784 aaKnown RBP25.57■■□□□ 1.68
Sdc3-201ENSMUST00000070478 Os9Q8K2C7 672 aa25.5■■□□□ 1.67
Sdc3-201ENSMUST00000070478 Anp32bQ9EST5 272 aaKnown RBP25.5■■□□□ 1.67
Sdc3-201ENSMUST00000070478 NrdcQ8BHG1 1161 aa25.47■■□□□ 1.67
Sdc3-201ENSMUST00000070478 Pcgf6Q99NA9 353 aa25.44■■□□□ 1.66
Sdc3-201ENSMUST00000070478 Lmod2Q3UHZ5 550 aa25.43■■□□□ 1.66
Sdc3-201ENSMUST00000070478 Ppargc1bQ8VHJ7 1014 aa25.43■■□□□ 1.66
Sdc3-201ENSMUST00000070478 TonslQ6NZL6 1363 aa25.39■■□□□ 1.66
Sdc3-201ENSMUST00000070478 Mier1Q5UAK0 511 aa25.37■■□□□ 1.65
Sdc3-201ENSMUST00000070478 Plekhg3Q4VAC9 1341 aa25.34■■□□□ 1.65
Sdc3-201ENSMUST00000070478 Nop58Q6DFW4 536 aaKnown RBP25.33■■□□□ 1.65
Sdc3-201ENSMUST00000070478 Brd4Q9ESU6 1400 aaKnown RBP25.29■■□□□ 1.64
Sdc3-201ENSMUST00000070478 Zbtb7cQ8VCZ7 619 aa25.24■■□□□ 1.63
Sdc3-201ENSMUST00000070478 Supt5hO55201 1082 aaKnown RBP25.14■■□□□ 1.61
Sdc3-201ENSMUST00000070478 Eif5bQ05D44 1216 aaKnown RBP25.13■■□□□ 1.61
Sdc3-201ENSMUST00000070478 Tnnt3Q9QZ47 272 aa25.12■■□□□ 1.61
Sdc3-201ENSMUST00000070478 Hnrnpul2Q00PI9 745 aaKnown RBP25.11■■□□□ 1.61
Sdc3-201ENSMUST00000070478 Ifnlr1Q8CGK5 535 aa25.1■■□□□ 1.61
Sdc3-201ENSMUST00000070478 Chic1Q8CBW7 227 aa25.07■■□□□ 1.6
Sdc3-201ENSMUST00000070478 NeflP08551 543 aa25.05■■□□□ 1.6
Sdc3-201ENSMUST00000070478 Rb1cc1Q9ESK9 1588 aa25.04■■□□□ 1.6
Sdc3-201ENSMUST00000070478 Ubl4bQ9CQ84 188 aa24.99■■□□□ 1.59
Sdc3-201ENSMUST00000070478 Amer1Q7TS75 1132 aa24.97■■□□□ 1.59
Sdc3-201ENSMUST00000070478 Clip1Q922J3 1391 aa24.94■■□□□ 1.58
Sdc3-201ENSMUST00000070478 Fkbp15Q6P9Q6 1216 aaKnown RBP24.92■■□□□ 1.58
Sdc3-201ENSMUST00000070478 Gm13697A2AK42 830 aa24.9■■□□□ 1.58
Sdc3-201ENSMUST00000070478 Cep164Q5DU05 1446 aa24.9■■□□□ 1.58
Sdc3-201ENSMUST00000070478 Dcaf1Q80TR8 1506 aa24.89■■□□□ 1.57
Sdc3-201ENSMUST00000070478 Eid3Q3V124 375 aa24.81■■□□□ 1.56
Sdc3-201ENSMUST00000070478 Erich6D3Z6S9 713 aa24.79■■□□□ 1.56
Sdc3-201ENSMUST00000070478 Zbtb4Q5F293 982 aa24.77■■□□□ 1.56
Sdc3-201ENSMUST00000070478 NacadQ5SWP3 1504 aa24.76■■□□□ 1.55
Sdc3-201ENSMUST00000070478 ClspnQ80YR7 1315 aa24.75■■□□□ 1.55
Sdc3-201ENSMUST00000070478 Atp1b4Q99ME6 356 aa24.66■■□□□ 1.54
Sdc3-201ENSMUST00000070478 Mapk8ip2Q9ERE9 830 aa24.6■■□□□ 1.53
Sdc3-201ENSMUST00000070478 Ttbk1Q6PCN3 1308 aa24.58■■□□□ 1.53
Sdc3-201ENSMUST00000070478 Ccer2J3QPU5 274 aa24.55■■□□□ 1.52
Sdc3-201ENSMUST00000070478 Hdac5Q9Z2V6 1113 aa24.54■■□□□ 1.52
Sdc3-201ENSMUST00000070478 4933416C03RikQ3V063 378 aa24.52■■□□□ 1.52
Sdc3-201ENSMUST00000070478 Prdm10Q3UTQ7 1184 aa24.5■■□□□ 1.51
Sdc3-201ENSMUST00000070478 Gm13695A2AK44 830 aa24.48■■□□□ 1.51
Sdc3-201ENSMUST00000070478 Chic2Q9D9G3 165 aa24.47■■□□□ 1.51
Sdc3-201ENSMUST00000070478 Nlrp6Q91WS2 869 aa24.46■■□□□ 1.51
Sdc3-201ENSMUST00000070478 Baz1aO88379 1555 aa24.45■■□□□ 1.5
Sdc3-201ENSMUST00000070478 BlmO88700 1416 aa24.44■■□□□ 1.5
Sdc3-201ENSMUST00000070478 Plppr3Q7TPB0 716 aa24.42■■□□□ 1.5
Sdc3-201ENSMUST00000070478 Kif15Q6P9L6 1387 aa24.38■■□□□ 1.49
Sdc3-201ENSMUST00000070478 Rsf1E9PWW9 1441 aaKnown RBP24.35■■□□□ 1.49
Sdc3-201ENSMUST00000070478 Setd5Q5XJV7 1441 aa24.35■■□□□ 1.49
Sdc3-201ENSMUST00000070478 Sall2Q9QX96 1004 aa24.34■■□□□ 1.49
Sdc3-201ENSMUST00000070478 Golga3P55937 1487 aa24.33■■□□□ 1.49
Sdc3-201ENSMUST00000070478 Clstn2Q9ER65 966 aa24.23■■□□□ 1.47
Sdc3-201ENSMUST00000070478 Polr3glQ8R0C0 218 aa24.23■■□□□ 1.47
Sdc3-201ENSMUST00000070478 Myt1Q8CFC2 1127 aa24.21■■□□□ 1.47
Sdc3-201ENSMUST00000070478 Ercc6F8VPZ5 1481 aa24.19■■□□□ 1.46
Sdc3-201ENSMUST00000070478 Kdm5dQ62240 1548 aa24.14■■□□□ 1.46
Sdc3-201ENSMUST00000070478 Ccdc18Q640L5 1455 aa24.11■■□□□ 1.45
Sdc3-201ENSMUST00000070478 Anp32aO35381 247 aa24.11■■□□□ 1.45
Sdc3-201ENSMUST00000070478 Rtl5Q5DTT4 599 aa24.09■■□□□ 1.45
Sdc3-201ENSMUST00000070478 Arhgap27A2AB59 869 aa24■■□□□ 1.43
Sdc3-201ENSMUST00000070478 Eea1Q8BL66 1411 aa24■■□□□ 1.43
Sdc3-201ENSMUST00000070478 Safb2Q80YR5 991 aaKnown RBP23.99■■□□□ 1.43
Sdc3-201ENSMUST00000070478 Mrs2Q5NCE8 434 aa23.98■■□□□ 1.43
Sdc3-201ENSMUST00000070478 4930567H17RikQ3V0K5 233 aa23.97■■□□□ 1.43
Sdc3-201ENSMUST00000070478 Csrnp3P59055 597 aa23.95■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms