RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Rhox8Q6VSS7 320 aa32,09■■■□□ 2,73
Sdc3-201ENSMUST00000070478 Ccdc136Q3TVA9 1136 aa28,6■■■□□ 2,17
Sdc3-201ENSMUST00000070478 NischQ80TM9 1593 aa28,48■■■□□ 2,15
Sdc3-201ENSMUST00000070478 Ehmt2Q9Z148 1263 aaKnown RBP28,38■■■□□ 2,13
Sdc3-201ENSMUST00000070478 Esf1Q3V1V3 845 aaKnown RBP28,37■■■□□ 2,13
Sdc3-201ENSMUST00000070478 Rpgrip1Q9EPQ2 1331 aa28,32■■■□□ 2,12
Sdc3-201ENSMUST00000070478 Cngb1E1AZ71 1325 aa28,25■■■□□ 2,11
Sdc3-201ENSMUST00000070478 Trim41Q5NCC3 630 aa27,98■■■□□ 2,07
Sdc3-201ENSMUST00000070478 Gab3Q8BSM5 595 aa27,85■■■□□ 2,05
Sdc3-201ENSMUST00000070478 Zeb1Q64318 1117 aa27,7■■■□□ 2,03
Sdc3-201ENSMUST00000070478 Npm2Q80W85 207 aa27,62■■■□□ 2,01
Sdc3-201ENSMUST00000070478 Ube2uB1AUC4 352 aa27,49■■□□□ 1,99
Sdc3-201ENSMUST00000070478 Las1lA2BE28 776 aaKnown RBP27,42■■□□□ 1,98
Sdc3-201ENSMUST00000070478 Myt1lP97500 1187 aa27,4■■□□□ 1,98
Sdc3-201ENSMUST00000070478 Wdr66E9Q743 1299 aa27,4■■□□□ 1,98
Sdc3-201ENSMUST00000070478 Abcc9P70170 1546 aa26,76■■□□□ 1,87
Sdc3-201ENSMUST00000070478 UbtfP25976 765 aaKnown RBP26,71■■□□□ 1,87
Sdc3-201ENSMUST00000070478 Il27Q8K3I6 234 aa26,71■■□□□ 1,87
Sdc3-201ENSMUST00000070478 HrcG5E8J6 738 aa26,59■■□□□ 1,85
Sdc3-201ENSMUST00000070478 Zcchc6Q5BLK4 1491 aaKnown RBP26,57■■□□□ 1,84
Sdc3-201ENSMUST00000070478 Acin1Q9JIX8 1338 aaKnown RBP26,54■■□□□ 1,84
Sdc3-201ENSMUST00000070478 NefmP08553 848 aa26,49■■□□□ 1,83
Sdc3-201ENSMUST00000070478 Ccdc180J3QNE4 1664 aa26,47■■□□□ 1,83
Sdc3-201ENSMUST00000070478 Gm35339A0A140LHH9 1649 aa26,4■■□□□ 1,82
Sdc3-201ENSMUST00000070478 Pelp1Q9DBD5 1123 aaKnown RBP26,25■■□□□ 1,79
Sdc3-201ENSMUST00000070478 Rtl1Q7M732 1744 aa26,12■■□□□ 1,77
Sdc3-201ENSMUST00000070478 Ap3b1Q9Z1T1 1105 aa26,08■■□□□ 1,77
Sdc3-201ENSMUST00000070478 Abcc8B2RUS7 1588 aa26,01■■□□□ 1,75
Sdc3-201ENSMUST00000070478 Fam50aQ9WV03 339 aaKnown RBP25,98■■□□□ 1,75
Sdc3-201ENSMUST00000070478 Slc24a1Q91WD8 1130 aa25,96■■□□□ 1,75
Sdc3-201ENSMUST00000070478 Stra8P70278 393 aa25,94■■□□□ 1,74
Sdc3-201ENSMUST00000070478 Neurod1Q60867 357 aa25,72■■□□□ 1,71
Sdc3-201ENSMUST00000070478 Npm1Q61937 292 aaKnown RBP25,71■■□□□ 1,71
Sdc3-201ENSMUST00000070478 CenpbP27790 599 aa25,66■■□□□ 1,7
Sdc3-201ENSMUST00000070478 NclP09405 707 aaKnown RBP25,65■■□□□ 1,7
Sdc3-201ENSMUST00000070478 Cdk11bP24788 784 aaKnown RBP25,57■■□□□ 1,68
Sdc3-201ENSMUST00000070478 Os9Q8K2C7 672 aa25,5■■□□□ 1,67
Sdc3-201ENSMUST00000070478 Anp32bQ9EST5 272 aaKnown RBP25,5■■□□□ 1,67
Sdc3-201ENSMUST00000070478 NrdcQ8BHG1 1161 aa25,47■■□□□ 1,67
Sdc3-201ENSMUST00000070478 Pcgf6Q99NA9 353 aa25,44■■□□□ 1,66
Sdc3-201ENSMUST00000070478 Lmod2Q3UHZ5 550 aa25,43■■□□□ 1,66
Sdc3-201ENSMUST00000070478 Ppargc1bQ8VHJ7 1014 aa25,43■■□□□ 1,66
Sdc3-201ENSMUST00000070478 TonslQ6NZL6 1363 aa25,39■■□□□ 1,66
Sdc3-201ENSMUST00000070478 Mier1Q5UAK0 511 aa25,37■■□□□ 1,65
Sdc3-201ENSMUST00000070478 Plekhg3Q4VAC9 1341 aa25,34■■□□□ 1,65
Sdc3-201ENSMUST00000070478 Nop58Q6DFW4 536 aaKnown RBP25,33■■□□□ 1,65
Sdc3-201ENSMUST00000070478 Brd4Q9ESU6 1400 aaKnown RBP25,29■■□□□ 1,64
Sdc3-201ENSMUST00000070478 Zbtb7cQ8VCZ7 619 aa25,24■■□□□ 1,63
Sdc3-201ENSMUST00000070478 Supt5hO55201 1082 aaKnown RBP25,14■■□□□ 1,61
Sdc3-201ENSMUST00000070478 Eif5bQ05D44 1216 aaKnown RBP25,13■■□□□ 1,61
Sdc3-201ENSMUST00000070478 Tnnt3Q9QZ47 272 aa25,12■■□□□ 1,61
Sdc3-201ENSMUST00000070478 Hnrnpul2Q00PI9 745 aaKnown RBP25,11■■□□□ 1,61
Sdc3-201ENSMUST00000070478 Ifnlr1Q8CGK5 535 aa25,1■■□□□ 1,61
Sdc3-201ENSMUST00000070478 Chic1Q8CBW7 227 aa25,07■■□□□ 1,6
Sdc3-201ENSMUST00000070478 NeflP08551 543 aa25,05■■□□□ 1,6
Sdc3-201ENSMUST00000070478 Rb1cc1Q9ESK9 1588 aa25,04■■□□□ 1,6
Sdc3-201ENSMUST00000070478 Ubl4bQ9CQ84 188 aa24,99■■□□□ 1,59
Sdc3-201ENSMUST00000070478 Amer1Q7TS75 1132 aa24,97■■□□□ 1,59
Sdc3-201ENSMUST00000070478 Clip1Q922J3 1391 aa24,94■■□□□ 1,58
Sdc3-201ENSMUST00000070478 Fkbp15Q6P9Q6 1216 aaKnown RBP24,92■■□□□ 1,58
Sdc3-201ENSMUST00000070478 Gm13697A2AK42 830 aa24,9■■□□□ 1,58
Sdc3-201ENSMUST00000070478 Cep164Q5DU05 1446 aa24,9■■□□□ 1,58
Sdc3-201ENSMUST00000070478 Dcaf1Q80TR8 1506 aa24,89■■□□□ 1,57
Sdc3-201ENSMUST00000070478 Eid3Q3V124 375 aa24,81■■□□□ 1,56
Sdc3-201ENSMUST00000070478 Erich6D3Z6S9 713 aa24,79■■□□□ 1,56
Sdc3-201ENSMUST00000070478 Zbtb4Q5F293 982 aa24,77■■□□□ 1,56
Sdc3-201ENSMUST00000070478 NacadQ5SWP3 1504 aa24,76■■□□□ 1,55
Sdc3-201ENSMUST00000070478 ClspnQ80YR7 1315 aa24,75■■□□□ 1,55
Sdc3-201ENSMUST00000070478 Atp1b4Q99ME6 356 aa24,66■■□□□ 1,54
Sdc3-201ENSMUST00000070478 Mapk8ip2Q9ERE9 830 aa24,6■■□□□ 1,53
Sdc3-201ENSMUST00000070478 Ttbk1Q6PCN3 1308 aa24,58■■□□□ 1,53
Sdc3-201ENSMUST00000070478 Ccer2J3QPU5 274 aa24,55■■□□□ 1,52
Sdc3-201ENSMUST00000070478 Hdac5Q9Z2V6 1113 aa24,54■■□□□ 1,52
Sdc3-201ENSMUST00000070478 4933416C03RikQ3V063 378 aa24,52■■□□□ 1,52
Sdc3-201ENSMUST00000070478 Prdm10Q3UTQ7 1184 aa24,5■■□□□ 1,51
Sdc3-201ENSMUST00000070478 Gm13695A2AK44 830 aa24,48■■□□□ 1,51
Sdc3-201ENSMUST00000070478 Chic2Q9D9G3 165 aa24,47■■□□□ 1,51
Sdc3-201ENSMUST00000070478 Nlrp6Q91WS2 869 aa24,46■■□□□ 1,51
Sdc3-201ENSMUST00000070478 Baz1aO88379 1555 aa24,45■■□□□ 1,5
Sdc3-201ENSMUST00000070478 BlmO88700 1416 aa24,44■■□□□ 1,5
Sdc3-201ENSMUST00000070478 Plppr3Q7TPB0 716 aa24,42■■□□□ 1,5
Sdc3-201ENSMUST00000070478 Kif15Q6P9L6 1387 aa24,38■■□□□ 1,49
Sdc3-201ENSMUST00000070478 Rsf1E9PWW9 1441 aaKnown RBP24,35■■□□□ 1,49
Sdc3-201ENSMUST00000070478 Setd5Q5XJV7 1441 aa24,35■■□□□ 1,49
Sdc3-201ENSMUST00000070478 Sall2Q9QX96 1004 aa24,34■■□□□ 1,49
Sdc3-201ENSMUST00000070478 Golga3P55937 1487 aa24,33■■□□□ 1,49
Sdc3-201ENSMUST00000070478 Clstn2Q9ER65 966 aa24,23■■□□□ 1,47
Sdc3-201ENSMUST00000070478 Polr3glQ8R0C0 218 aa24,23■■□□□ 1,47
Sdc3-201ENSMUST00000070478 Myt1Q8CFC2 1127 aa24,21■■□□□ 1,47
Sdc3-201ENSMUST00000070478 Ercc6F8VPZ5 1481 aa24,19■■□□□ 1,46
Sdc3-201ENSMUST00000070478 Kdm5dQ62240 1548 aa24,14■■□□□ 1,46
Sdc3-201ENSMUST00000070478 Ccdc18Q640L5 1455 aa24,11■■□□□ 1,45
Sdc3-201ENSMUST00000070478 Anp32aO35381 247 aa24,11■■□□□ 1,45
Sdc3-201ENSMUST00000070478 Rtl5Q5DTT4 599 aa24,09■■□□□ 1,45
Sdc3-201ENSMUST00000070478 Arhgap27A2AB59 869 aa24■■□□□ 1,43
Sdc3-201ENSMUST00000070478 Eea1Q8BL66 1411 aa24■■□□□ 1,43
Sdc3-201ENSMUST00000070478 Safb2Q80YR5 991 aaKnown RBP23,99■■□□□ 1,43
Sdc3-201ENSMUST00000070478 Mrs2Q5NCE8 434 aa23,98■■□□□ 1,43
Sdc3-201ENSMUST00000070478 4930567H17RikQ3V0K5 233 aa23,97■■□□□ 1,43
Sdc3-201ENSMUST00000070478 Csrnp3P59055 597 aa23,95■■□□□ 1,42
Retrieved 100 of 22,080 RNA–protein pairs in 32,8 ms