RNA–Protein interactions for RNA: ENSMUST00000070345.4

Usp39-201, Transcript of U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp39, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39-201ENSMUST00000070345 NischQ80TM9 1593 aa39.45■■■■□ 3.91
Usp39-201ENSMUST00000070345 Gm35339A0A140LHH9 1649 aa38.82■■■■□ 3.8
Usp39-201ENSMUST00000070345 Abcc9P70170 1546 aa38.43■■■■□ 3.74
Usp39-201ENSMUST00000070345 Abcc8B2RUS7 1588 aa37.38■■■■□ 3.58
Usp39-201ENSMUST00000070345 Rtl1Q7M732 1744 aa37.17■■■■□ 3.54
Usp39-201ENSMUST00000070345 Rhox8Q6VSS7 320 aa36.62■■■■□ 3.45
Usp39-201ENSMUST00000070345 Ccdc180J3QNE4 1664 aa36.46■■■■□ 3.43
Usp39-201ENSMUST00000070345 Zcchc6Q5BLK4 1491 aaKnown RBP35.56■■■■□ 3.28
Usp39-201ENSMUST00000070345 Rpgrip1Q9EPQ2 1331 aa35.2■■■■□ 3.22
Usp39-201ENSMUST00000070345 Dcaf1Q80TR8 1506 aa35.11■■■■□ 3.21
Usp39-201ENSMUST00000070345 ScribQ80U72 1612 aa34.64■■■■□ 3.14
Usp39-201ENSMUST00000070345 Rb1cc1Q9ESK9 1588 aa34.62■■■■□ 3.13
Usp39-201ENSMUST00000070345 HrcG5E8J6 738 aa34.52■■■■□ 3.12
Usp39-201ENSMUST00000070345 Acin1Q9JIX8 1338 aaKnown RBP34.39■■■■□ 3.1
Usp39-201ENSMUST00000070345 Baz1aO88379 1555 aa34.28■■■■□ 3.08
Usp39-201ENSMUST00000070345 Kdm5dQ62240 1548 aa34.04■■■■□ 3.04
Usp39-201ENSMUST00000070345 Ccdc136Q3TVA9 1136 aa33.89■■■■□ 3.02
Usp39-201ENSMUST00000070345 NacadQ5SWP3 1504 aa33.72■■■□□ 2.99
Usp39-201ENSMUST00000070345 Crybg2B7ZCC2 1516 aa33.64■■■□□ 2.98
Usp39-201ENSMUST00000070345 Ehmt2Q9Z148 1263 aaKnown RBP33.6■■■□□ 2.97
Usp39-201ENSMUST00000070345 Smarca2Q6DIC0 1577 aa33.58■■■□□ 2.97
Usp39-201ENSMUST00000070345 Trim41Q5NCC3 630 aa33.49■■■□□ 2.95
Usp39-201ENSMUST00000070345 Cep164Q5DU05 1446 aa33.4■■■□□ 2.94
Usp39-201ENSMUST00000070345 Pcgf6Q99NA9 353 aa33.1■■■□□ 2.89
Usp39-201ENSMUST00000070345 Sycp2Q9CUU3 1500 aa32.98■■■□□ 2.87
Usp39-201ENSMUST00000070345 Rsf1E9PWW9 1441 aaKnown RBP32.71■■■□□ 2.83
Usp39-201ENSMUST00000070345 Brd4Q9ESU6 1400 aaKnown RBP32.69■■■□□ 2.82
Usp39-201ENSMUST00000070345 Chic1Q8CBW7 227 aa32.51■■■□□ 2.8
Usp39-201ENSMUST00000070345 Golga3P55937 1487 aa32.51■■■□□ 2.8
Usp39-201ENSMUST00000070345 Cecr2E9Q2Z1 1453 aa32.45■■■□□ 2.79
Usp39-201ENSMUST00000070345 Ccdc88bQ4QRL3 1481 aa32.42■■■□□ 2.78
Usp39-201ENSMUST00000070345 Cngb1E1AZ71 1325 aa32.41■■■□□ 2.78
Usp39-201ENSMUST00000070345 Supt5hO55201 1082 aaKnown RBP32.41■■■□□ 2.78
Usp39-201ENSMUST00000070345 Synj1Q8CHC4 1574 aa32.38■■■□□ 2.77
Usp39-201ENSMUST00000070345 Top2bQ64511 1612 aa32.21■■■□□ 2.75
Usp39-201ENSMUST00000070345 Gab3Q8BSM5 595 aa32.2■■■□□ 2.75
Usp39-201ENSMUST00000070345 BicraF8VPZ9 1578 aa32.2■■■□□ 2.74
Usp39-201ENSMUST00000070345 NefmP08553 848 aa32.15■■■□□ 2.74
Usp39-201ENSMUST00000070345 CftrP26361 1476 aa32.12■■■□□ 2.73
Usp39-201ENSMUST00000070345 Cttnbp2B9EJA2 1648 aa32.03■■■□□ 2.72
Usp39-201ENSMUST00000070345 Mier1Q5UAK0 511 aa31.98■■■□□ 2.71
Usp39-201ENSMUST00000070345 Cc2d2aQ8CFW7 1633 aa31.79■■■□□ 2.68
Usp39-201ENSMUST00000070345 Zeb1Q64318 1117 aa31.77■■■□□ 2.68
Usp39-201ENSMUST00000070345 Neurod1Q60867 357 aa31.74■■■□□ 2.67
Usp39-201ENSMUST00000070345 Rapgef2Q8CHG7 1496 aa31.72■■■□□ 2.67
Usp39-201ENSMUST00000070345 Esf1Q3V1V3 845 aaKnown RBP31.71■■■□□ 2.67
Usp39-201ENSMUST00000070345 Smarca4Q3TKT4 1613 aaKnown RBP31.68■■■□□ 2.66
Usp39-201ENSMUST00000070345 Fmn1Q05860 1466 aa31.6■■■□□ 2.65
Usp39-201ENSMUST00000070345 Top2aQ01320 1528 aaKnown RBP31.59■■■□□ 2.65
Usp39-201ENSMUST00000070345 Sall2Q9QX96 1004 aa31.54■■■□□ 2.64
Usp39-201ENSMUST00000070345 Cep162Q6ZQ06 1403 aa31.38■■■□□ 2.61
Usp39-201ENSMUST00000070345 Eif4g1Q6NZJ6 1600 aaKnown RBP31.26■■■□□ 2.59
Usp39-201ENSMUST00000070345 UbtfP25976 765 aaKnown RBP31.25■■■□□ 2.59
Usp39-201ENSMUST00000070345 Las1lA2BE28 776 aaKnown RBP31.22■■■□□ 2.59
Usp39-201ENSMUST00000070345 Iqgap2Q3UQ44 1575 aa31.16■■■□□ 2.58
Usp39-201ENSMUST00000070345 Anks4bQ8K3X6 423 aa31.15■■■□□ 2.58
Usp39-201ENSMUST00000070345 Aebp2Q9Z248 504 aaKnown RBP31.04■■■□□ 2.56
Usp39-201ENSMUST00000070345 TnnQ80Z71 1560 aa31.03■■■□□ 2.56
Usp39-201ENSMUST00000070345 ClspnQ80YR7 1315 aa31.02■■■□□ 2.56
Usp39-201ENSMUST00000070345 Wdr66E9Q743 1299 aa30.93■■■□□ 2.54
Usp39-201ENSMUST00000070345 Ncapd3Q6ZQK0 1506 aa30.92■■■□□ 2.54
Usp39-201ENSMUST00000070345 Myt1lP97500 1187 aa30.92■■■□□ 2.54
Usp39-201ENSMUST00000070345 Clip1Q922J3 1391 aa30.9■■■□□ 2.54
Usp39-201ENSMUST00000070345 Atad2bE9Q166 1460 aaKnown RBP30.86■■■□□ 2.53
Usp39-201ENSMUST00000070345 TonslQ6NZL6 1363 aa30.81■■■□□ 2.52
Usp39-201ENSMUST00000070345 Npm2Q80W85 207 aa30.8■■■□□ 2.52
Usp39-201ENSMUST00000070345 Cdk11bP24788 784 aaKnown RBP30.75■■■□□ 2.51
Usp39-201ENSMUST00000070345 Arhgap35Q91YM2 1499 aa30.74■■■□□ 2.51
Usp39-201ENSMUST00000070345 NrkQ9R0G8 1455 aa30.72■■■□□ 2.51
Usp39-201ENSMUST00000070345 Nop58Q6DFW4 536 aaKnown RBP30.71■■■□□ 2.51
Usp39-201ENSMUST00000070345 1700123L14RikQ3V2K7 440 aa30.66■■■□□ 2.5
Usp39-201ENSMUST00000070345 Plekhg3Q4VAC9 1341 aa30.65■■■□□ 2.5
Usp39-201ENSMUST00000070345 Csrnp3P59055 597 aa30.63■■■□□ 2.49
Usp39-201ENSMUST00000070345 Arap1Q4LDD4 1452 aa30.59■■■□□ 2.49
Usp39-201ENSMUST00000070345 Kdm5bQ80Y84 1544 aa30.58■■■□□ 2.49
Usp39-201ENSMUST00000070345 Lamc3Q9R0B6 1581 aa30.58■■■□□ 2.49
Usp39-201ENSMUST00000070345 Pds5bQ4VA53 1446 aaKnown RBP30.57■■■□□ 2.48
Usp39-201ENSMUST00000070345 Eea1Q8BL66 1411 aa30.56■■■□□ 2.48
Usp39-201ENSMUST00000070345 PtprkP35822 1457 aa30.56■■■□□ 2.48
Usp39-201ENSMUST00000070345 Ccdc18Q640L5 1455 aa30.55■■■□□ 2.48
Usp39-201ENSMUST00000070345 Arhgef5E9Q7D5 1581 aa30.55■■■□□ 2.48
Usp39-201ENSMUST00000070345 Map3k1P53349 1493 aa30.51■■■□□ 2.48
Usp39-201ENSMUST00000070345 Wdr62Q3U3T8 1523 aa30.47■■■□□ 2.47
Usp39-201ENSMUST00000070345 Shroom4Q1W617 1475 aa30.46■■■□□ 2.47
Usp39-201ENSMUST00000070345 Frmpd1A2AKB4 1549 aa30.45■■■□□ 2.47
Usp39-201ENSMUST00000070345 Aplp2Q06335 707 aa30.44■■■□□ 2.46
Usp39-201ENSMUST00000070345 TchhA0A0B4J1F9 1599 aa30.44■■■□□ 2.46
Usp39-201ENSMUST00000070345 Camsap1A2AHC3 1581 aa30.4■■■□□ 2.46
Usp39-201ENSMUST00000070345 Tiam1Q60610 1591 aa30.37■■■□□ 2.45
Usp39-201ENSMUST00000070345 Erich3F6QRE9 1637 aa30.35■■■□□ 2.45
Usp39-201ENSMUST00000070345 Ppargc1bQ8VHJ7 1014 aa30.34■■■□□ 2.45
Usp39-201ENSMUST00000070345 Setd5Q5XJV7 1441 aa30.32■■■□□ 2.44
Usp39-201ENSMUST00000070345 Unc13aQ4KUS2 1712 aa30.3■■■□□ 2.44
Usp39-201ENSMUST00000070345 Baz1bQ9Z277 1479 aa30.19■■■□□ 2.42
Usp39-201ENSMUST00000070345 Mroh2bQ7M6Y6 1581 aa30.19■■■□□ 2.42
Usp39-201ENSMUST00000070345 Kif15Q6P9L6 1387 aa30.18■■■□□ 2.42
Usp39-201ENSMUST00000070345 Ankrd26Q811D2 1581 aa30.18■■■□□ 2.42
Usp39-201ENSMUST00000070345 Grin2bQ01097 1482 aa30.16■■■□□ 2.42
Usp39-201ENSMUST00000070345 AqrQ8CFQ3 1481 aaKnown RBP30.16■■■□□ 2.42
Usp39-201ENSMUST00000070345 Naip1Q9QWK5 1403 aa30.15■■■□□ 2.42
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms