RNA–Protein interactions for RNA: ENSMUST00000066496.9

Nudcd3-201, Transcript of NudC domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nudcd3, Length 3,927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3-201ENSMUST00000066496 Rhox8Q6VSS7 320 aa18.4■□□□□ 0.54
Nudcd3-201ENSMUST00000066496 Gm35339A0A140LHH9 1649 aa17.86■□□□□ 0.45
Nudcd3-201ENSMUST00000066496 NischQ80TM9 1593 aa17.73■□□□□ 0.43
Nudcd3-201ENSMUST00000066496 Ehmt2Q9Z148 1263 aaKnown RBP17.38■□□□□ 0.37
Nudcd3-201ENSMUST00000066496 Ccdc136Q3TVA9 1136 aa16.93■□□□□ 0.3
Nudcd3-201ENSMUST00000066496 Abcc9P70170 1546 aa16.87■□□□□ 0.29
Nudcd3-201ENSMUST00000066496 Abcc8B2RUS7 1588 aa16.76■□□□□ 0.27
Nudcd3-201ENSMUST00000066496 Rpgrip1Q9EPQ2 1331 aa16.56■□□□□ 0.24
Nudcd3-201ENSMUST00000066496 Acin1Q9JIX8 1338 aaKnown RBP16.35■□□□□ 0.21
Nudcd3-201ENSMUST00000066496 Trim41Q5NCC3 630 aa16.35■□□□□ 0.21
Nudcd3-201ENSMUST00000066496 Ccdc180J3QNE4 1664 aa16.33■□□□□ 0.2
Nudcd3-201ENSMUST00000066496 Gab3Q8BSM5 595 aa16.33■□□□□ 0.2
Nudcd3-201ENSMUST00000066496 Cngb1E1AZ71 1325 aa16.21■□□□□ 0.19
Nudcd3-201ENSMUST00000066496 Rtl1Q7M732 1744 aa16.17■□□□□ 0.18
Nudcd3-201ENSMUST00000066496 Zeb1Q64318 1117 aa16.17■□□□□ 0.18
Nudcd3-201ENSMUST00000066496 Pcgf6Q99NA9 353 aa16.09■□□□□ 0.17
Nudcd3-201ENSMUST00000066496 ScribQ80U72 1612 aa16.02■□□□□ 0.16
Nudcd3-201ENSMUST00000066496 HrcG5E8J6 738 aa15.98■□□□□ 0.15
Nudcd3-201ENSMUST00000066496 Supt5hO55201 1082 aaKnown RBP15.91■□□□□ 0.14
Nudcd3-201ENSMUST00000066496 Esf1Q3V1V3 845 aaKnown RBP15.88■□□□□ 0.13
Nudcd3-201ENSMUST00000066496 Zcchc6Q5BLK4 1491 aaKnown RBP15.81■□□□□ 0.12
Nudcd3-201ENSMUST00000066496 Dcaf1Q80TR8 1506 aa15.79■□□□□ 0.12
Nudcd3-201ENSMUST00000066496 Wdr66E9Q743 1299 aa15.78■□□□□ 0.12
Nudcd3-201ENSMUST00000066496 Ppargc1bQ8VHJ7 1014 aa15.77■□□□□ 0.12
Nudcd3-201ENSMUST00000066496 Myt1lP97500 1187 aa15.71■□□□□ 0.11
Nudcd3-201ENSMUST00000066496 UbtfP25976 765 aaKnown RBP15.7■□□□□ 0.1
Nudcd3-201ENSMUST00000066496 NacadQ5SWP3 1504 aa15.63■□□□□ 0.09
Nudcd3-201ENSMUST00000066496 Chic1Q8CBW7 227 aa15.62■□□□□ 0.09
Nudcd3-201ENSMUST00000066496 Rb1cc1Q9ESK9 1588 aa15.58■□□□□ 0.08
Nudcd3-201ENSMUST00000066496 Mier1Q5UAK0 511 aa15.53■□□□□ 0.08
Nudcd3-201ENSMUST00000066496 Kdm5dQ62240 1548 aa15.49■□□□□ 0.07
Nudcd3-201ENSMUST00000066496 Neurod1Q60867 357 aa15.48■□□□□ 0.07
Nudcd3-201ENSMUST00000066496 Las1lA2BE28 776 aaKnown RBP15.46■□□□□ 0.07
Nudcd3-201ENSMUST00000066496 Npm2Q80W85 207 aa15.46■□□□□ 0.07
Nudcd3-201ENSMUST00000066496 NefmP08553 848 aa15.39■□□□□ 0.05
Nudcd3-201ENSMUST00000066496 Sall2Q9QX96 1004 aa15.37■□□□□ 0.05
Nudcd3-201ENSMUST00000066496 Sycp2Q9CUU3 1500 aa15.31■□□□□ 0.04
Nudcd3-201ENSMUST00000066496 Cep164Q5DU05 1446 aa15.3■□□□□ 0.04
Nudcd3-201ENSMUST00000066496 Ap3b1Q9Z1T1 1105 aa15.24■□□□□ 0.03
Nudcd3-201ENSMUST00000066496 Gm38655A0A286YDK6 273 aa15.23■□□□□ 0.03
Nudcd3-201ENSMUST00000066496 Il27Q8K3I6 234 aa15.22■□□□□ 0.03
Nudcd3-201ENSMUST00000066496 Baz1aO88379 1555 aa15.22■□□□□ 0.03
Nudcd3-201ENSMUST00000066496 Rsf1E9PWW9 1441 aaKnown RBP15.19■□□□□ 0.02
Nudcd3-201ENSMUST00000066496 Plekhg3Q4VAC9 1341 aa15.18■□□□□ 0.02
Nudcd3-201ENSMUST00000066496 Crybg2B7ZCC2 1516 aa15.18■□□□□ 0.02
Nudcd3-201ENSMUST00000066496 Csrnp3P59055 597 aa15.12■□□□□ 0.01
Nudcd3-201ENSMUST00000066496 Aebp2Q9Z248 504 aaKnown RBP15.12■□□□□ 0.01
Nudcd3-201ENSMUST00000066496 Nop58Q6DFW4 536 aaKnown RBP15.12■□□□□ 0.01
Nudcd3-201ENSMUST00000066496 Cdk11bP24788 784 aaKnown RBP15.11■□□□□ 0.01
Nudcd3-201ENSMUST00000066496 Mapk8ip2Q9ERE9 830 aa15.1■□□□□ 0.01
Nudcd3-201ENSMUST00000066496 Eid3Q3V124 375 aa15.08■□□□□ 0
Nudcd3-201ENSMUST00000066496 Ccdc88bQ4QRL3 1481 aa15.05■□□□□ 0
Nudcd3-201ENSMUST00000066496 Ube2uB1AUC4 352 aa15.04■□□□□ -0
Nudcd3-201ENSMUST00000066496 BicraF8VPZ9 1578 aa15□□□□□ -0.01
Nudcd3-201ENSMUST00000066496 Slc24a1Q91WD8 1130 aa14.98□□□□□ -0.01
Nudcd3-201ENSMUST00000066496 TonslQ6NZL6 1363 aa14.97□□□□□ -0.01
Nudcd3-201ENSMUST00000066496 Brd4Q9ESU6 1400 aaKnown RBP14.97□□□□□ -0.01
Nudcd3-201ENSMUST00000066496 Fam50aQ9WV03 339 aaKnown RBP14.93□□□□□ -0.02
Nudcd3-201ENSMUST00000066496 1700123L14RikQ3V2K7 440 aa14.89□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 Cecr2E9Q2Z1 1453 aa14.86□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 ClspnQ80YR7 1315 aa14.86□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 Golga3P55937 1487 aa14.85□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 Lmod2Q3UHZ5 550 aa14.85□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 CenpbP27790 599 aa14.84□□□□□ -0.03
Nudcd3-201ENSMUST00000066496 Anks4bQ8K3X6 423 aa14.82□□□□□ -0.04
Nudcd3-201ENSMUST00000066496 Clip1Q922J3 1391 aa14.78□□□□□ -0.04
Nudcd3-201ENSMUST00000066496 NclP09405 707 aaKnown RBP14.77□□□□□ -0.04
Nudcd3-201ENSMUST00000066496 Smarca2Q6DIC0 1577 aa14.75□□□□□ -0.05
Nudcd3-201ENSMUST00000066496 Pds5bQ4VA53 1446 aaKnown RBP14.62□□□□□ -0.07
Nudcd3-201ENSMUST00000066496 Synj1Q8CHC4 1574 aa14.62□□□□□ -0.07
Nudcd3-201ENSMUST00000066496 Eif5bQ05D44 1216 aaKnown RBP14.61□□□□□ -0.07
Nudcd3-201ENSMUST00000066496 SafbD3YXK2 937 aaKnown RBP14.6□□□□□ -0.07
Nudcd3-201ENSMUST00000066496 Baz1bQ9Z277 1479 aa14.53□□□□□ -0.08
Nudcd3-201ENSMUST00000066496 Thoc2B1AZI6 1594 aaKnown RBP14.52□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 CftrP26361 1476 aa14.52□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Hnrnpul2Q00PI9 745 aaKnown RBP14.51□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Atad2bE9Q166 1460 aaKnown RBP14.51□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Cep162Q6ZQ06 1403 aa14.49□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Rapgef2Q8CHG7 1496 aa14.48□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Aplp2Q06335 707 aa14.47□□□□□ -0.09
Nudcd3-201ENSMUST00000066496 Chic2Q9D9G3 165 aa14.44□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 BlmO88700 1416 aa14.43□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 Setd5Q5XJV7 1441 aa14.43□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 Npm1Q61937 292 aaKnown RBP14.43□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 Ttbk1Q6PCN3 1308 aa14.42□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 Smarca4Q3TKT4 1613 aaKnown RBP14.41□□□□□ -0.1
Nudcd3-201ENSMUST00000066496 Fam71e1A1L3C1 212 aa14.39□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Zbtb7cQ8VCZ7 619 aa14.39□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Zbtb4Q5F293 982 aa14.38□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Ubl4bQ9CQ84 188 aa14.37□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Tnnt3Q9QZ47 272 aa14.37□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Stra8P70278 393 aa14.35□□□□□ -0.11
Nudcd3-201ENSMUST00000066496 Hspa5P20029 655 aaKnown RBP14.33□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Cc2d2aQ8CFW7 1633 aa14.32□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Kif15Q6P9L6 1387 aa14.3□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Sin3aQ60520 1274 aaKnown RBP14.29□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 P3h3Q8CG70 732 aa14.29□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Fmn1Q05860 1466 aa14.28□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Eea1Q8BL66 1411 aa14.28□□□□□ -0.12
Nudcd3-201ENSMUST00000066496 Iqgap2Q3UQ44 1575 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms