RNA–Protein interactions for RNA: ENSMUST00000055242.10

Clptm1-201, Transcript of Cleft lip and palate transmembrane protein 1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clptm1, Length 4,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1-201ENSMUST00000055242 NischQ80TM9 1593 aa26.62■■□□□ 1.85
Clptm1-201ENSMUST00000055242 Rhox8Q6VSS7 320 aa26.2■■□□□ 1.79
Clptm1-201ENSMUST00000055242 Abcc9P70170 1546 aa25.57■■□□□ 1.68
Clptm1-201ENSMUST00000055242 Gm35339A0A140LHH9 1649 aa25.21■■□□□ 1.63
Clptm1-201ENSMUST00000055242 Abcc8B2RUS7 1588 aa25.04■■□□□ 1.6
Clptm1-201ENSMUST00000055242 Ccdc136Q3TVA9 1136 aa24.23■■□□□ 1.47
Clptm1-201ENSMUST00000055242 Ehmt2Q9Z148 1263 aaKnown RBP24.19■■□□□ 1.46
Clptm1-201ENSMUST00000055242 Rtl1Q7M732 1744 aa24.12■■□□□ 1.45
Clptm1-201ENSMUST00000055242 Ccdc180J3QNE4 1664 aa24.08■■□□□ 1.45
Clptm1-201ENSMUST00000055242 Rpgrip1Q9EPQ2 1331 aa23.57■■□□□ 1.36
Clptm1-201ENSMUST00000055242 Zcchc6Q5BLK4 1491 aaKnown RBP23.5■■□□□ 1.35
Clptm1-201ENSMUST00000055242 Trim41Q5NCC3 630 aa23.48■■□□□ 1.35
Clptm1-201ENSMUST00000055242 HrcG5E8J6 738 aa23.36■■□□□ 1.33
Clptm1-201ENSMUST00000055242 Acin1Q9JIX8 1338 aaKnown RBP23.34■■□□□ 1.33
Clptm1-201ENSMUST00000055242 Rb1cc1Q9ESK9 1588 aa23.34■■□□□ 1.33
Clptm1-201ENSMUST00000055242 Cngb1E1AZ71 1325 aa23.16■■□□□ 1.3
Clptm1-201ENSMUST00000055242 ScribQ80U72 1612 aa23.16■■□□□ 1.3
Clptm1-201ENSMUST00000055242 Dcaf1Q80TR8 1506 aa23.15■■□□□ 1.3
Clptm1-201ENSMUST00000055242 Gab3Q8BSM5 595 aa23.13■■□□□ 1.29
Clptm1-201ENSMUST00000055242 Kdm5dQ62240 1548 aa22.99■■□□□ 1.27
Clptm1-201ENSMUST00000055242 Baz1aO88379 1555 aa22.93■■□□□ 1.26
Clptm1-201ENSMUST00000055242 Esf1Q3V1V3 845 aaKnown RBP22.76■■□□□ 1.23
Clptm1-201ENSMUST00000055242 NacadQ5SWP3 1504 aa22.75■■□□□ 1.23
Clptm1-201ENSMUST00000055242 Chic1Q8CBW7 227 aa22.69■■□□□ 1.22
Clptm1-201ENSMUST00000055242 Pcgf6Q99NA9 353 aa22.67■■□□□ 1.22
Clptm1-201ENSMUST00000055242 Zeb1Q64318 1117 aa22.55■■□□□ 1.2
Clptm1-201ENSMUST00000055242 Cep164Q5DU05 1446 aa22.51■■□□□ 1.19
Clptm1-201ENSMUST00000055242 Supt5hO55201 1082 aaKnown RBP22.42■■□□□ 1.18
Clptm1-201ENSMUST00000055242 Rsf1E9PWW9 1441 aaKnown RBP22.34■■□□□ 1.17
Clptm1-201ENSMUST00000055242 Smarca2Q6DIC0 1577 aa22.32■■□□□ 1.16
Clptm1-201ENSMUST00000055242 Myt1lP97500 1187 aa22.28■■□□□ 1.16
Clptm1-201ENSMUST00000055242 Brd4Q9ESU6 1400 aaKnown RBP22.24■■□□□ 1.15
Clptm1-201ENSMUST00000055242 UbtfP25976 765 aaKnown RBP22.22■■□□□ 1.15
Clptm1-201ENSMUST00000055242 Sycp2Q9CUU3 1500 aa22.2■■□□□ 1.14
Clptm1-201ENSMUST00000055242 Cecr2E9Q2Z1 1453 aa22.2■■□□□ 1.14
Clptm1-201ENSMUST00000055242 Mier1Q5UAK0 511 aa22.19■■□□□ 1.14
Clptm1-201ENSMUST00000055242 Ccdc88bQ4QRL3 1481 aa22.17■■□□□ 1.14
Clptm1-201ENSMUST00000055242 Crybg2B7ZCC2 1516 aa22.13■■□□□ 1.13
Clptm1-201ENSMUST00000055242 Npm2Q80W85 207 aa22.05■■□□□ 1.12
Clptm1-201ENSMUST00000055242 Golga3P55937 1487 aa22.03■■□□□ 1.12
Clptm1-201ENSMUST00000055242 NefmP08553 848 aa22■■□□□ 1.11
Clptm1-201ENSMUST00000055242 Wdr66E9Q743 1299 aa21.99■■□□□ 1.11
Clptm1-201ENSMUST00000055242 Ppargc1bQ8VHJ7 1014 aa21.91■■□□□ 1.1
Clptm1-201ENSMUST00000055242 Synj1Q8CHC4 1574 aa21.88■■□□□ 1.09
Clptm1-201ENSMUST00000055242 Sall2Q9QX96 1004 aa21.79■■□□□ 1.08
Clptm1-201ENSMUST00000055242 Las1lA2BE28 776 aaKnown RBP21.78■■□□□ 1.08
Clptm1-201ENSMUST00000055242 Il27Q8K3I6 234 aa21.78■■□□□ 1.08
Clptm1-201ENSMUST00000055242 Neurod1Q60867 357 aa21.77■■□□□ 1.07
Clptm1-201ENSMUST00000055242 CftrP26361 1476 aa21.76■■□□□ 1.07
Clptm1-201ENSMUST00000055242 Plekhg3Q4VAC9 1341 aa21.7■■□□□ 1.06
Clptm1-201ENSMUST00000055242 Ap3b1Q9Z1T1 1105 aa21.66■■□□□ 1.06
Clptm1-201ENSMUST00000055242 BicraF8VPZ9 1578 aa21.62■■□□□ 1.05
Clptm1-201ENSMUST00000055242 Aebp2Q9Z248 504 aaKnown RBP21.53■■□□□ 1.04
Clptm1-201ENSMUST00000055242 Clip1Q922J3 1391 aa21.43■■□□□ 1.02
Clptm1-201ENSMUST00000055242 Cc2d2aQ8CFW7 1633 aa21.37■■□□□ 1.01
Clptm1-201ENSMUST00000055242 TonslQ6NZL6 1363 aa21.36■■□□□ 1.01
Clptm1-201ENSMUST00000055242 Eid3Q3V124 375 aa21.36■■□□□ 1.01
Clptm1-201ENSMUST00000055242 Cep162Q6ZQ06 1403 aa21.35■■□□□ 1.01
Clptm1-201ENSMUST00000055242 Cttnbp2B9EJA2 1648 aa21.35■■□□□ 1.01
Clptm1-201ENSMUST00000055242 Rapgef2Q8CHG7 1496 aa21.35■■□□□ 1.01
Clptm1-201ENSMUST00000055242 Smarca4Q3TKT4 1613 aaKnown RBP21.31■■□□□ 1
Clptm1-201ENSMUST00000055242 Fmn1Q05860 1466 aa21.31■■□□□ 1
Clptm1-201ENSMUST00000055242 Nop58Q6DFW4 536 aaKnown RBP21.28■■□□□ 1
Clptm1-201ENSMUST00000055242 Top2bQ64511 1612 aa21.27■■□□□ 1
Clptm1-201ENSMUST00000055242 Cdk11bP24788 784 aaKnown RBP21.27■□□□□ 0.99
Clptm1-201ENSMUST00000055242 ClspnQ80YR7 1315 aa21.21■□□□□ 0.99
Clptm1-201ENSMUST00000055242 Fam50aQ9WV03 339 aaKnown RBP21.17■□□□□ 0.98
Clptm1-201ENSMUST00000055242 Lmod2Q3UHZ5 550 aa21.17■□□□□ 0.98
Clptm1-201ENSMUST00000055242 Csrnp3P59055 597 aa21.15■□□□□ 0.98
Clptm1-201ENSMUST00000055242 Mapk8ip2Q9ERE9 830 aa21.13■□□□□ 0.97
Clptm1-201ENSMUST00000055242 Top2aQ01320 1528 aaKnown RBP21.09■□□□□ 0.97
Clptm1-201ENSMUST00000055242 Iqgap2Q3UQ44 1575 aa21.09■□□□□ 0.97
Clptm1-201ENSMUST00000055242 Kif15Q6P9L6 1387 aa21.07■□□□□ 0.96
Clptm1-201ENSMUST00000055242 Ube2uB1AUC4 352 aa21.06■□□□□ 0.96
Clptm1-201ENSMUST00000055242 Anks4bQ8K3X6 423 aa21.04■□□□□ 0.96
Clptm1-201ENSMUST00000055242 Gm38655A0A286YDK6 273 aa21.03■□□□□ 0.96
Clptm1-201ENSMUST00000055242 Setd5Q5XJV7 1441 aa21.02■□□□□ 0.96
Clptm1-201ENSMUST00000055242 Atad2bE9Q166 1460 aaKnown RBP20.97■□□□□ 0.95
Clptm1-201ENSMUST00000055242 Eea1Q8BL66 1411 aa20.93■□□□□ 0.94
Clptm1-201ENSMUST00000055242 Npm1Q61937 292 aaKnown RBP20.92■□□□□ 0.94
Clptm1-201ENSMUST00000055242 PtprkP35822 1457 aa20.9■□□□□ 0.94
Clptm1-201ENSMUST00000055242 BlmO88700 1416 aa20.9■□□□□ 0.94
Clptm1-201ENSMUST00000055242 Pds5bQ4VA53 1446 aaKnown RBP20.9■□□□□ 0.94
Clptm1-201ENSMUST00000055242 NclP09405 707 aaKnown RBP20.89■□□□□ 0.94
Clptm1-201ENSMUST00000055242 1700123L14RikQ3V2K7 440 aa20.89■□□□□ 0.93
Clptm1-201ENSMUST00000055242 Ubl4bQ9CQ84 188 aa20.83■□□□□ 0.93
Clptm1-201ENSMUST00000055242 Arhgap35Q91YM2 1499 aa20.8■□□□□ 0.92
Clptm1-201ENSMUST00000055242 Slc24a1Q91WD8 1130 aa20.74■□□□□ 0.91
Clptm1-201ENSMUST00000055242 Arap1Q4LDD4 1452 aa20.73■□□□□ 0.91
Clptm1-201ENSMUST00000055242 Frmpd1A2AKB4 1549 aa20.72■□□□□ 0.91
Clptm1-201ENSMUST00000055242 Ncapd3Q6ZQK0 1506 aa20.7■□□□□ 0.9
Clptm1-201ENSMUST00000055242 Ercc6F8VPZ5 1481 aa20.7■□□□□ 0.9
Clptm1-201ENSMUST00000055242 Ccdc18Q640L5 1455 aa20.66■□□□□ 0.9
Clptm1-201ENSMUST00000055242 Chic2Q9D9G3 165 aa20.65■□□□□ 0.9
Clptm1-201ENSMUST00000055242 Baz1bQ9Z277 1479 aa20.65■□□□□ 0.9
Clptm1-201ENSMUST00000055242 CenpbP27790 599 aa20.62■□□□□ 0.89
Clptm1-201ENSMUST00000055242 Hspa5P20029 655 aaKnown RBP20.58■□□□□ 0.88
Clptm1-201ENSMUST00000055242 Shroom4Q1W617 1475 aa20.57■□□□□ 0.88
Clptm1-201ENSMUST00000055242 Cux2P70298 1426 aa20.55■□□□□ 0.88
Clptm1-201ENSMUST00000055242 NrkQ9R0G8 1455 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms