RNA–Protein interactions for RNA: ENSMUST00000054963.9

Fdft1-201, Transcript of Squalene synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fdft1, Length 2,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1-201ENSMUST00000054963 NischQ80TM9 1593 aa20.44■□□□□ 0.86
Fdft1-201ENSMUST00000054963 Abcc9P70170 1546 aa19.77■□□□□ 0.76
Fdft1-201ENSMUST00000054963 Gm35339A0A140LHH9 1649 aa19.72■□□□□ 0.75
Fdft1-201ENSMUST00000054963 Rhox8Q6VSS7 320 aa19.53■□□□□ 0.72
Fdft1-201ENSMUST00000054963 Abcc8B2RUS7 1588 aa19.33■□□□□ 0.68
Fdft1-201ENSMUST00000054963 Rtl1Q7M732 1744 aa18.76■□□□□ 0.59
Fdft1-201ENSMUST00000054963 Ccdc180J3QNE4 1664 aa18.62■□□□□ 0.57
Fdft1-201ENSMUST00000054963 Zcchc6Q5BLK4 1491 aaKnown RBP18.34■□□□□ 0.53
Fdft1-201ENSMUST00000054963 Ehmt2Q9Z148 1263 aaKnown RBP18.18■□□□□ 0.5
Fdft1-201ENSMUST00000054963 Ccdc136Q3TVA9 1136 aa18.15■□□□□ 0.5
Fdft1-201ENSMUST00000054963 Rpgrip1Q9EPQ2 1331 aa18.13■□□□□ 0.49
Fdft1-201ENSMUST00000054963 ScribQ80U72 1612 aa17.93■□□□□ 0.46
Fdft1-201ENSMUST00000054963 Acin1Q9JIX8 1338 aaKnown RBP17.92■□□□□ 0.46
Fdft1-201ENSMUST00000054963 Rb1cc1Q9ESK9 1588 aa17.92■□□□□ 0.46
Fdft1-201ENSMUST00000054963 HrcG5E8J6 738 aa17.89■□□□□ 0.45
Fdft1-201ENSMUST00000054963 Dcaf1Q80TR8 1506 aa17.85■□□□□ 0.45
Fdft1-201ENSMUST00000054963 Trim41Q5NCC3 630 aa17.7■□□□□ 0.42
Fdft1-201ENSMUST00000054963 Kdm5dQ62240 1548 aa17.66■□□□□ 0.42
Fdft1-201ENSMUST00000054963 Baz1aO88379 1555 aa17.65■□□□□ 0.42
Fdft1-201ENSMUST00000054963 Pcgf6Q99NA9 353 aa17.42■□□□□ 0.38
Fdft1-201ENSMUST00000054963 NacadQ5SWP3 1504 aa17.41■□□□□ 0.38
Fdft1-201ENSMUST00000054963 Gab3Q8BSM5 595 aa17.28■□□□□ 0.36
Fdft1-201ENSMUST00000054963 Cep164Q5DU05 1446 aa17.28■□□□□ 0.36
Fdft1-201ENSMUST00000054963 Smarca2Q6DIC0 1577 aa17.28■□□□□ 0.36
Fdft1-201ENSMUST00000054963 Cngb1E1AZ71 1325 aa17.27■□□□□ 0.36
Fdft1-201ENSMUST00000054963 Chic1Q8CBW7 227 aa17.26■□□□□ 0.35
Fdft1-201ENSMUST00000054963 Supt5hO55201 1082 aaKnown RBP17.17■□□□□ 0.34
Fdft1-201ENSMUST00000054963 Rsf1E9PWW9 1441 aaKnown RBP17.14■□□□□ 0.33
Fdft1-201ENSMUST00000054963 Crybg2B7ZCC2 1516 aa17.13■□□□□ 0.33
Fdft1-201ENSMUST00000054963 Sycp2Q9CUU3 1500 aa17.05■□□□□ 0.32
Fdft1-201ENSMUST00000054963 Cecr2E9Q2Z1 1453 aa17.02■□□□□ 0.32
Fdft1-201ENSMUST00000054963 Ccdc88bQ4QRL3 1481 aa17.02■□□□□ 0.31
Fdft1-201ENSMUST00000054963 Zeb1Q64318 1117 aa16.97■□□□□ 0.31
Fdft1-201ENSMUST00000054963 Brd4Q9ESU6 1400 aaKnown RBP16.92■□□□□ 0.3
Fdft1-201ENSMUST00000054963 Mier1Q5UAK0 511 aa16.9■□□□□ 0.3
Fdft1-201ENSMUST00000054963 Esf1Q3V1V3 845 aaKnown RBP16.87■□□□□ 0.29
Fdft1-201ENSMUST00000054963 Golga3P55937 1487 aa16.86■□□□□ 0.29
Fdft1-201ENSMUST00000054963 Synj1Q8CHC4 1574 aa16.83■□□□□ 0.29
Fdft1-201ENSMUST00000054963 Neurod1Q60867 357 aa16.77■□□□□ 0.27
Fdft1-201ENSMUST00000054963 BicraF8VPZ9 1578 aa16.7■□□□□ 0.26
Fdft1-201ENSMUST00000054963 NefmP08553 848 aa16.7■□□□□ 0.26
Fdft1-201ENSMUST00000054963 CftrP26361 1476 aa16.69■□□□□ 0.26
Fdft1-201ENSMUST00000054963 Sall2Q9QX96 1004 aa16.68■□□□□ 0.26
Fdft1-201ENSMUST00000054963 UbtfP25976 765 aaKnown RBP16.67■□□□□ 0.26
Fdft1-201ENSMUST00000054963 Myt1lP97500 1187 aa16.56■□□□□ 0.24
Fdft1-201ENSMUST00000054963 Top2bQ64511 1612 aa16.53■□□□□ 0.24
Fdft1-201ENSMUST00000054963 Cc2d2aQ8CFW7 1633 aa16.49■□□□□ 0.23
Fdft1-201ENSMUST00000054963 Ppargc1bQ8VHJ7 1014 aa16.49■□□□□ 0.23
Fdft1-201ENSMUST00000054963 Aebp2Q9Z248 504 aaKnown RBP16.49■□□□□ 0.23
Fdft1-201ENSMUST00000054963 Wdr66E9Q743 1299 aa16.45■□□□□ 0.22
Fdft1-201ENSMUST00000054963 Cttnbp2B9EJA2 1648 aa16.44■□□□□ 0.22
Fdft1-201ENSMUST00000054963 Las1lA2BE28 776 aaKnown RBP16.44■□□□□ 0.22
Fdft1-201ENSMUST00000054963 Rapgef2Q8CHG7 1496 aa16.42■□□□□ 0.22
Fdft1-201ENSMUST00000054963 Npm2Q80W85 207 aa16.37■□□□□ 0.21
Fdft1-201ENSMUST00000054963 Cep162Q6ZQ06 1403 aa16.35■□□□□ 0.21
Fdft1-201ENSMUST00000054963 Smarca4Q3TKT4 1613 aaKnown RBP16.35■□□□□ 0.21
Fdft1-201ENSMUST00000054963 Plekhg3Q4VAC9 1341 aa16.34■□□□□ 0.21
Fdft1-201ENSMUST00000054963 Fmn1Q05860 1466 aa16.31■□□□□ 0.2
Fdft1-201ENSMUST00000054963 Top2aQ01320 1528 aaKnown RBP16.29■□□□□ 0.2
Fdft1-201ENSMUST00000054963 Csrnp3P59055 597 aa16.24■□□□□ 0.19
Fdft1-201ENSMUST00000054963 1700123L14RikQ3V2K7 440 aa16.23■□□□□ 0.19
Fdft1-201ENSMUST00000054963 Clip1Q922J3 1391 aa16.22■□□□□ 0.19
Fdft1-201ENSMUST00000054963 Anks4bQ8K3X6 423 aa16.21■□□□□ 0.19
Fdft1-201ENSMUST00000054963 ClspnQ80YR7 1315 aa16.18■□□□□ 0.18
Fdft1-201ENSMUST00000054963 TonslQ6NZL6 1363 aa16.17■□□□□ 0.18
Fdft1-201ENSMUST00000054963 Ap3b1Q9Z1T1 1105 aa16.16■□□□□ 0.18
Fdft1-201ENSMUST00000054963 Nop58Q6DFW4 536 aaKnown RBP16.15■□□□□ 0.18
Fdft1-201ENSMUST00000054963 Iqgap2Q3UQ44 1575 aa16.14■□□□□ 0.18
Fdft1-201ENSMUST00000054963 Cdk11bP24788 784 aaKnown RBP16.13■□□□□ 0.17
Fdft1-201ENSMUST00000054963 Il27Q8K3I6 234 aa16.12■□□□□ 0.17
Fdft1-201ENSMUST00000054963 Eid3Q3V124 375 aa16.08■□□□□ 0.16
Fdft1-201ENSMUST00000054963 PtprkP35822 1457 aa16.05■□□□□ 0.16
Fdft1-201ENSMUST00000054963 Ncapd3Q6ZQK0 1506 aa16.03■□□□□ 0.16
Fdft1-201ENSMUST00000054963 Eif4g1Q6NZJ6 1600 aaKnown RBP16.01■□□□□ 0.15
Fdft1-201ENSMUST00000054963 Arhgap35Q91YM2 1499 aa16■□□□□ 0.15
Fdft1-201ENSMUST00000054963 Gm38655A0A286YDK6 273 aa16■□□□□ 0.15
Fdft1-201ENSMUST00000054963 Atad2bE9Q166 1460 aaKnown RBP15.98■□□□□ 0.15
Fdft1-201ENSMUST00000054963 Arap1Q4LDD4 1452 aa15.95■□□□□ 0.14
Fdft1-201ENSMUST00000054963 Pds5bQ4VA53 1446 aaKnown RBP15.94■□□□□ 0.14
Fdft1-201ENSMUST00000054963 Setd5Q5XJV7 1441 aa15.9■□□□□ 0.14
Fdft1-201ENSMUST00000054963 Eea1Q8BL66 1411 aa15.9■□□□□ 0.14
Fdft1-201ENSMUST00000054963 Mapk8ip2Q9ERE9 830 aa15.9■□□□□ 0.14
Fdft1-201ENSMUST00000054963 TnnQ80Z71 1560 aa15.89■□□□□ 0.13
Fdft1-201ENSMUST00000054963 Aplp2Q06335 707 aa15.89■□□□□ 0.13
Fdft1-201ENSMUST00000054963 CenpbP27790 599 aa15.88■□□□□ 0.13
Fdft1-201ENSMUST00000054963 Kif15Q6P9L6 1387 aa15.87■□□□□ 0.13
Fdft1-201ENSMUST00000054963 Frmpd1A2AKB4 1549 aa15.85■□□□□ 0.13
Fdft1-201ENSMUST00000054963 NrkQ9R0G8 1455 aa15.84■□□□□ 0.13
Fdft1-201ENSMUST00000054963 Lmod2Q3UHZ5 550 aa15.81■□□□□ 0.12
Fdft1-201ENSMUST00000054963 Arhgef5E9Q7D5 1581 aa15.8■□□□□ 0.12
Fdft1-201ENSMUST00000054963 Fam50aQ9WV03 339 aaKnown RBP15.79■□□□□ 0.12
Fdft1-201ENSMUST00000054963 Kdm5bQ80Y84 1544 aa15.79■□□□□ 0.12
Fdft1-201ENSMUST00000054963 AqrQ8CFQ3 1481 aaKnown RBP15.79■□□□□ 0.12
Fdft1-201ENSMUST00000054963 BlmO88700 1416 aa15.78■□□□□ 0.12
Fdft1-201ENSMUST00000054963 Myt1Q8CFC2 1127 aa15.77■□□□□ 0.12
Fdft1-201ENSMUST00000054963 Shroom4Q1W617 1475 aa15.77■□□□□ 0.11
Fdft1-201ENSMUST00000054963 Wdr62Q3U3T8 1523 aa15.75■□□□□ 0.11
Fdft1-201ENSMUST00000054963 Ccdc18Q640L5 1455 aa15.74■□□□□ 0.11
Fdft1-201ENSMUST00000054963 Lamc3Q9R0B6 1581 aa15.74■□□□□ 0.11
Fdft1-201ENSMUST00000054963 Naip1Q9QWK5 1403 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms