RNA–Protein interactions for RNA: ENSMUST00000054351.5

Ndnf-201, Transcript of Protein NDNF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndnf, Length 10,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndnf-201ENSMUST00000054351 Ehmt2Q9Z148 1263 aaKnown RBP11.94□□□□□ -0.5
Ndnf-201ENSMUST00000054351 Rhox8Q6VSS7 320 aa11.88□□□□□ -0.51
Ndnf-201ENSMUST00000054351 Amer1Q7TS75 1132 aa11.58□□□□□ -0.56
Ndnf-201ENSMUST00000054351 Ttbk1Q6PCN3 1308 aa11.39□□□□□ -0.59
Ndnf-201ENSMUST00000054351 Wdr66E9Q743 1299 aa11.34□□□□□ -0.59
Ndnf-201ENSMUST00000054351 Zeb1Q64318 1117 aa11.29□□□□□ -0.6
Ndnf-201ENSMUST00000054351 Las1lA2BE28 776 aaKnown RBP11.25□□□□□ -0.61
Ndnf-201ENSMUST00000054351 Cngb1E1AZ71 1325 aa11.18□□□□□ -0.62
Ndnf-201ENSMUST00000054351 Pelp1Q9DBD5 1123 aaKnown RBP11.09□□□□□ -0.63
Ndnf-201ENSMUST00000054351 Rpgrip1Q9EPQ2 1331 aa10.97□□□□□ -0.65
Ndnf-201ENSMUST00000054351 Slc24a1Q91WD8 1130 aa10.93□□□□□ -0.66
Ndnf-201ENSMUST00000054351 Ube2uB1AUC4 352 aa10.89□□□□□ -0.67
Ndnf-201ENSMUST00000054351 CenpbP27790 599 aa10.8□□□□□ -0.68
Ndnf-201ENSMUST00000054351 Myt1Q8CFC2 1127 aa10.78□□□□□ -0.68
Ndnf-201ENSMUST00000054351 4933416C03RikQ3V063 378 aa10.72□□□□□ -0.69
Ndnf-201ENSMUST00000054351 Ppargc1bQ8VHJ7 1014 aa10.7□□□□□ -0.7
Ndnf-201ENSMUST00000054351 4930567H17RikQ3V0K5 233 aa10.66□□□□□ -0.7
Ndnf-201ENSMUST00000054351 Gab3Q8BSM5 595 aa10.65□□□□□ -0.7
Ndnf-201ENSMUST00000054351 Gm38655A0A286YDK6 273 aa10.52□□□□□ -0.73
Ndnf-201ENSMUST00000054351 Ccdc136Q3TVA9 1136 aa10.5□□□□□ -0.73
Ndnf-201ENSMUST00000054351 Eif5bQ05D44 1216 aaKnown RBP10.49□□□□□ -0.73
Ndnf-201ENSMUST00000054351 DiexfQ8BTT6 772 aaKnown RBP10.48□□□□□ -0.73
Ndnf-201ENSMUST00000054351 Myt1lP97500 1187 aa10.43□□□□□ -0.74
Ndnf-201ENSMUST00000054351 Ythdc1E9Q5K9 736 aaKnown RBP10.35□□□□□ -0.75
Ndnf-201ENSMUST00000054351 UbtfP25976 765 aaKnown RBP10.35□□□□□ -0.75
Ndnf-201ENSMUST00000054351 ArxO35085 564 aa10.29□□□□□ -0.76
Ndnf-201ENSMUST00000054351 Pcgf6Q99NA9 353 aa10.28□□□□□ -0.76
Ndnf-201ENSMUST00000054351 Esf1Q3V1V3 845 aaKnown RBP10.26□□□□□ -0.77
Ndnf-201ENSMUST00000054351 Npm2Q80W85 207 aa10.25□□□□□ -0.77
Ndnf-201ENSMUST00000054351 Acin1Q9JIX8 1338 aaKnown RBP10.24□□□□□ -0.77
Ndnf-201ENSMUST00000054351 Neurod1Q60867 357 aa10.23□□□□□ -0.77
Ndnf-201ENSMUST00000054351 Supt5hO55201 1082 aaKnown RBP10.21□□□□□ -0.78
Ndnf-201ENSMUST00000054351 Cdk11bP24788 784 aaKnown RBP10.2□□□□□ -0.78
Ndnf-201ENSMUST00000054351 Lmod3E9QA62 571 aa10.18□□□□□ -0.78
Ndnf-201ENSMUST00000054351 DaxxO35613 739 aa10.17□□□□□ -0.78
Ndnf-201ENSMUST00000054351 Nop58Q6DFW4 536 aaKnown RBP10.09□□□□□ -0.79
Ndnf-201ENSMUST00000054351 HrcG5E8J6 738 aa10.09□□□□□ -0.79
Ndnf-201ENSMUST00000054351 CatipB9EKE5 520 aa10.08□□□□□ -0.8
Ndnf-201ENSMUST00000054351 Mapk8ip2Q9ERE9 830 aa10.07□□□□□ -0.8
Ndnf-201ENSMUST00000054351 NeflP08551 543 aa10.05□□□□□ -0.8
Ndnf-201ENSMUST00000054351 Stra8P70278 393 aa10.04□□□□□ -0.8
Ndnf-201ENSMUST00000054351 Csrnp3P59055 597 aa10.02□□□□□ -0.8
Ndnf-201ENSMUST00000054351 Zbtb7cQ8VCZ7 619 aa10.02□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Rtl5Q5DTT4 599 aa10□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Chic1Q8CBW7 227 aa10□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Ap3b1Q9Z1T1 1105 aa10□□□□□ -0.81
Ndnf-201ENSMUST00000054351 NrdcQ8BHG1 1161 aa9.99□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Vsig10D3YX43 558 aa9.99□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Zbtb4Q5F293 982 aa9.96□□□□□ -0.81
Ndnf-201ENSMUST00000054351 Trim41Q5NCC3 630 aa9.96□□□□□ -0.82
Ndnf-201ENSMUST00000054351 NclP09405 707 aaKnown RBP9.95□□□□□ -0.82
Ndnf-201ENSMUST00000054351 Prdm10Q3UTQ7 1184 aa9.92□□□□□ -0.82
Ndnf-201ENSMUST00000054351 Rangap1P46061 589 aaKnown RBP9.91□□□□□ -0.82
Ndnf-201ENSMUST00000054351 NefmP08553 848 aa9.89□□□□□ -0.83
Ndnf-201ENSMUST00000054351 Fam50aQ9WV03 339 aaKnown RBP9.89□□□□□ -0.83
Ndnf-201ENSMUST00000054351 Os9Q8K2C7 672 aa9.88□□□□□ -0.83
Ndnf-201ENSMUST00000054351 Polr3glQ8R0C0 218 aa9.85□□□□□ -0.83
Ndnf-201ENSMUST00000054351 Tnnt3Q9QZ47 272 aa9.82□□□□□ -0.84
Ndnf-201ENSMUST00000054351 Arid4bA2CG63 1314 aaKnown RBP9.77□□□□□ -0.85
Ndnf-201ENSMUST00000054351 Podxl2Q8CAE9 603 aa9.74□□□□□ -0.85
Ndnf-201ENSMUST00000054351 DekQ7TNV0 380 aaKnown RBP9.74□□□□□ -0.85
Ndnf-201ENSMUST00000054351 Anp32aO35381 247 aa9.74□□□□□ -0.85
Ndnf-201ENSMUST00000054351 Anp32bQ9EST5 272 aaKnown RBP9.71□□□□□ -0.86
Ndnf-201ENSMUST00000054351 Il27Q8K3I6 234 aa9.7□□□□□ -0.86
Ndnf-201ENSMUST00000054351 Taok2Q6ZQ29 1240 aa9.68□□□□□ -0.86
Ndnf-201ENSMUST00000054351 Znf316Q6PGE4 1016 aa9.68□□□□□ -0.86
Ndnf-201ENSMUST00000054351 TonslQ6NZL6 1363 aa9.66□□□□□ -0.86
Ndnf-201ENSMUST00000054351 Ppp4r2Q0VGB7 417 aa9.65□□□□□ -0.87
Ndnf-201ENSMUST00000054351 Bcl11aQ9QYE3 773 aa9.65□□□□□ -0.87
Ndnf-201ENSMUST00000054351 Upf2A2AT37 1269 aaKnown RBP9.62□□□□□ -0.87
Ndnf-201ENSMUST00000054351 Mier1Q5UAK0 511 aa9.61□□□□□ -0.87
Ndnf-201ENSMUST00000054351 Fam71e1A1L3C1 212 aa9.59□□□□□ -0.87
Ndnf-201ENSMUST00000054351 Spryd3E9Q9B3 442 aa9.57□□□□□ -0.88
Ndnf-201ENSMUST00000054351 Rad21Q61550 635 aaKnown RBP9.55□□□□□ -0.88
Ndnf-201ENSMUST00000054351 Nlrp6Q91WS2 869 aa9.54□□□□□ -0.88
Ndnf-201ENSMUST00000054351 NischQ80TM9 1593 aa9.53□□□□□ -0.88
Ndnf-201ENSMUST00000054351 Eid3Q3V124 375 aa9.51□□□□□ -0.89
Ndnf-201ENSMUST00000054351 IbspQ61711 324 aa9.51□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Ccdc180J3QNE4 1664 aa9.5□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Erich6D3Z6S9 713 aa9.5□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Hsp90aa1P07901 733 aaKnown RBP9.5□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Trim26Q99PN3 545 aa9.49□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Hnrnpul2Q00PI9 745 aaKnown RBP9.47□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Sall2Q9QX96 1004 aa9.47□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Ubap1lG3UW59 384 aa9.47□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Ifnlr1Q8CGK5 535 aa9.46□□□□□ -0.89
Ndnf-201ENSMUST00000054351 Ccdc9Q8VC31 543 aaKnown RBP9.46□□□□□ -0.89
Ndnf-201ENSMUST00000054351 1700123L14RikQ3V2K7 440 aa9.46□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Calr4Q3TQS0 420 aa9.45□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Plppr3Q7TPB0 716 aa9.45□□□□□ -0.9
Ndnf-201ENSMUST00000054351 P3h3Q8CG70 732 aa9.45□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Plekhg3Q4VAC9 1341 aa9.45□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Lmod2Q3UHZ5 550 aa9.44□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Atp1b4Q99ME6 356 aa9.44□□□□□ -0.9
Ndnf-201ENSMUST00000054351 ClspnQ80YR7 1315 aa9.43□□□□□ -0.9
Ndnf-201ENSMUST00000054351 BccipQ9CWI3 316 aa9.42□□□□□ -0.9
Ndnf-201ENSMUST00000054351 Irx6Q9ER75 438 aa9.4□□□□□ -0.9
Ndnf-201ENSMUST00000054351 PtmaP26350 111 aa9.4□□□□□ -0.91
Ndnf-201ENSMUST00000054351 Trim44Q9QXA7 346 aa9.4□□□□□ -0.91
Ndnf-201ENSMUST00000054351 Clstn1Q9EPL2 979 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms