RNA–Protein interactions for RNA: ENSMUST00000051344.5

Col19a1-201, Transcript of Collagen alpha-1(XIX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col19a1, Length 3,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1-201ENSMUST00000051344 NischQ80TM9 1593 aa16.91■□□□□ 0.3
Col19a1-201ENSMUST00000051344 Gm35339A0A140LHH9 1649 aa16.53■□□□□ 0.24
Col19a1-201ENSMUST00000051344 Abcc9P70170 1546 aa16.4■□□□□ 0.22
Col19a1-201ENSMUST00000051344 Abcc8B2RUS7 1588 aa16.06■□□□□ 0.16
Col19a1-201ENSMUST00000051344 Rpgrip1Q9EPQ2 1331 aa16.01■□□□□ 0.15
Col19a1-201ENSMUST00000051344 Rhox8Q6VSS7 320 aa15.79■□□□□ 0.12
Col19a1-201ENSMUST00000051344 Acin1Q9JIX8 1338 aaKnown RBP15.46■□□□□ 0.07
Col19a1-201ENSMUST00000051344 Pcgf6Q99NA9 353 aa15.37■□□□□ 0.05
Col19a1-201ENSMUST00000051344 Rtl1Q7M732 1744 aa15.28■□□□□ 0.04
Col19a1-201ENSMUST00000051344 Ehmt2Q9Z148 1263 aaKnown RBP15.24■□□□□ 0.03
Col19a1-201ENSMUST00000051344 Ccdc180J3QNE4 1664 aa15.18■□□□□ 0.02
Col19a1-201ENSMUST00000051344 ScribQ80U72 1612 aa15.03■□□□□ -0
Col19a1-201ENSMUST00000051344 Zcchc6Q5BLK4 1491 aaKnown RBP14.96□□□□□ -0.01
Col19a1-201ENSMUST00000051344 Supt5hO55201 1082 aaKnown RBP14.89□□□□□ -0.03
Col19a1-201ENSMUST00000051344 Neurod1Q60867 357 aa14.87□□□□□ -0.03
Col19a1-201ENSMUST00000051344 Dcaf1Q80TR8 1506 aa14.83□□□□□ -0.03
Col19a1-201ENSMUST00000051344 Rb1cc1Q9ESK9 1588 aa14.83□□□□□ -0.04
Col19a1-201ENSMUST00000051344 Las1lA2BE28 776 aaKnown RBP14.79□□□□□ -0.04
Col19a1-201ENSMUST00000051344 Trim41Q5NCC3 630 aa14.73□□□□□ -0.05
Col19a1-201ENSMUST00000051344 Kdm5dQ62240 1548 aa14.73□□□□□ -0.05
Col19a1-201ENSMUST00000051344 Ccdc136Q3TVA9 1136 aa14.71□□□□□ -0.05
Col19a1-201ENSMUST00000051344 Baz1aO88379 1555 aa14.61□□□□□ -0.07
Col19a1-201ENSMUST00000051344 1700123L14RikQ3V2K7 440 aa14.55□□□□□ -0.08
Col19a1-201ENSMUST00000051344 HrcG5E8J6 738 aa14.51□□□□□ -0.09
Col19a1-201ENSMUST00000051344 NacadQ5SWP3 1504 aa14.51□□□□□ -0.09
Col19a1-201ENSMUST00000051344 CenpbP27790 599 aa14.49□□□□□ -0.09
Col19a1-201ENSMUST00000051344 Zeb1Q64318 1117 aa14.46□□□□□ -0.09
Col19a1-201ENSMUST00000051344 Myt1Q8CFC2 1127 aa14.44□□□□□ -0.1
Col19a1-201ENSMUST00000051344 Csrnp3P59055 597 aa14.43□□□□□ -0.1
Col19a1-201ENSMUST00000051344 Cngb1E1AZ71 1325 aa14.35□□□□□ -0.11
Col19a1-201ENSMUST00000051344 Anks4bQ8K3X6 423 aa14.33□□□□□ -0.11
Col19a1-201ENSMUST00000051344 Smarca2Q6DIC0 1577 aa14.3□□□□□ -0.12
Col19a1-201ENSMUST00000051344 DiexfQ8BTT6 772 aaKnown RBP14.29□□□□□ -0.12
Col19a1-201ENSMUST00000051344 Sall2Q9QX96 1004 aa14.26□□□□□ -0.13
Col19a1-201ENSMUST00000051344 Sycp2Q9CUU3 1500 aa14.23□□□□□ -0.13
Col19a1-201ENSMUST00000051344 Crybg2B7ZCC2 1516 aa14.22□□□□□ -0.13
Col19a1-201ENSMUST00000051344 Aplp2Q06335 707 aa14.17□□□□□ -0.14
Col19a1-201ENSMUST00000051344 NefmP08553 848 aa14.13□□□□□ -0.15
Col19a1-201ENSMUST00000051344 Cecr2E9Q2Z1 1453 aa14.08□□□□□ -0.16
Col19a1-201ENSMUST00000051344 Gm38655A0A286YDK6 273 aa14.08□□□□□ -0.16
Col19a1-201ENSMUST00000051344 Bcl11aQ9QYE3 773 aa14.07□□□□□ -0.16
Col19a1-201ENSMUST00000051344 Cdk11bP24788 784 aaKnown RBP14.02□□□□□ -0.16
Col19a1-201ENSMUST00000051344 Cep164Q5DU05 1446 aa14.02□□□□□ -0.16
Col19a1-201ENSMUST00000051344 Chic1Q8CBW7 227 aa14.01□□□□□ -0.17
Col19a1-201ENSMUST00000051344 BicraF8VPZ9 1578 aa13.99□□□□□ -0.17
Col19a1-201ENSMUST00000051344 Wdr66E9Q743 1299 aa13.99□□□□□ -0.17
Col19a1-201ENSMUST00000051344 Mier1Q5UAK0 511 aa13.97□□□□□ -0.17
Col19a1-201ENSMUST00000051344 Rsf1E9PWW9 1441 aaKnown RBP13.97□□□□□ -0.17
Col19a1-201ENSMUST00000051344 Nop58Q6DFW4 536 aaKnown RBP13.97□□□□□ -0.17
Col19a1-201ENSMUST00000051344 Brd4Q9ESU6 1400 aaKnown RBP13.92□□□□□ -0.18
Col19a1-201ENSMUST00000051344 Gab3Q8BSM5 595 aa13.92□□□□□ -0.18
Col19a1-201ENSMUST00000051344 Synj1Q8CHC4 1574 aa13.91□□□□□ -0.18
Col19a1-201ENSMUST00000051344 Ccdc88bQ4QRL3 1481 aa13.9□□□□□ -0.19
Col19a1-201ENSMUST00000051344 Ppargc1bQ8VHJ7 1014 aa13.85□□□□□ -0.19
Col19a1-201ENSMUST00000051344 Aebp2Q9Z248 504 aaKnown RBP13.84□□□□□ -0.19
Col19a1-201ENSMUST00000051344 Golga3P55937 1487 aa13.83□□□□□ -0.2
Col19a1-201ENSMUST00000051344 Fam71e1A1L3C1 212 aa13.79□□□□□ -0.2
Col19a1-201ENSMUST00000051344 CftrP26361 1476 aa13.79□□□□□ -0.2
Col19a1-201ENSMUST00000051344 Esf1Q3V1V3 845 aaKnown RBP13.75□□□□□ -0.21
Col19a1-201ENSMUST00000051344 ClspnQ80YR7 1315 aa13.75□□□□□ -0.21
Col19a1-201ENSMUST00000051344 PrkcshO08795 521 aa13.74□□□□□ -0.21
Col19a1-201ENSMUST00000051344 Mapk8ip2Q9ERE9 830 aa13.69□□□□□ -0.22
Col19a1-201ENSMUST00000051344 Top2bQ64511 1612 aa13.67□□□□□ -0.22
Col19a1-201ENSMUST00000051344 Cttnbp2B9EJA2 1648 aa13.65□□□□□ -0.22
Col19a1-201ENSMUST00000051344 Ifnlr1Q8CGK5 535 aa13.64□□□□□ -0.23
Col19a1-201ENSMUST00000051344 SafbD3YXK2 937 aaKnown RBP13.63□□□□□ -0.23
Col19a1-201ENSMUST00000051344 Cc2d2aQ8CFW7 1633 aa13.62□□□□□ -0.23
Col19a1-201ENSMUST00000051344 Smarca4Q3TKT4 1613 aaKnown RBP13.61□□□□□ -0.23
Col19a1-201ENSMUST00000051344 Hnrnpul2Q00PI9 745 aaKnown RBP13.56□□□□□ -0.24
Col19a1-201ENSMUST00000051344 UbtfP25976 765 aaKnown RBP13.56□□□□□ -0.24
Col19a1-201ENSMUST00000051344 Amer1Q7TS75 1132 aa13.51□□□□□ -0.25
Col19a1-201ENSMUST00000051344 Tnnt3Q9QZ47 272 aa13.5□□□□□ -0.25
Col19a1-201ENSMUST00000051344 Iqgap2Q3UQ44 1575 aa13.46□□□□□ -0.26
Col19a1-201ENSMUST00000051344 TonslQ6NZL6 1363 aa13.45□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Fmn1Q05860 1466 aa13.42□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Rapgef2Q8CHG7 1496 aa13.42□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Anp32aO35381 247 aa13.41□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Top2aQ01320 1528 aaKnown RBP13.41□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Ap3b1Q9Z1T1 1105 aa13.4□□□□□ -0.26
Col19a1-201ENSMUST00000051344 Myt1lP97500 1187 aa13.38□□□□□ -0.27
Col19a1-201ENSMUST00000051344 Rtl5Q5DTT4 599 aa13.34□□□□□ -0.27
Col19a1-201ENSMUST00000051344 Cep162Q6ZQ06 1403 aa13.33□□□□□ -0.28
Col19a1-201ENSMUST00000051344 Atad2bE9Q166 1460 aaKnown RBP13.33□□□□□ -0.28
Col19a1-201ENSMUST00000051344 Pelp1Q9DBD5 1123 aaKnown RBP13.32□□□□□ -0.28
Col19a1-201ENSMUST00000051344 Npm2Q80W85 207 aa13.27□□□□□ -0.28
Col19a1-201ENSMUST00000051344 Ttbk1Q6PCN3 1308 aa13.26□□□□□ -0.29
Col19a1-201ENSMUST00000051344 Nolc1E9Q5C9 702 aaKnown RBP13.23□□□□□ -0.29
Col19a1-201ENSMUST00000051344 Pds5bQ4VA53 1446 aaKnown RBP13.23□□□□□ -0.29
Col19a1-201ENSMUST00000051344 Hdac5Q9Z2V6 1113 aa13.23□□□□□ -0.29
Col19a1-201ENSMUST00000051344 Frmpd1A2AKB4 1549 aa13.22□□□□□ -0.29
Col19a1-201ENSMUST00000051344 TnnQ80Z71 1560 aa13.2□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Eif4g1Q6NZJ6 1600 aaKnown RBP13.2□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Plekhg3Q4VAC9 1341 aa13.19□□□□□ -0.3
Col19a1-201ENSMUST00000051344 PtprkP35822 1457 aa13.19□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Il27Q8K3I6 234 aa13.18□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Wdr62Q3U3T8 1523 aa13.17□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Calr4Q3TQS0 420 aa13.15□□□□□ -0.3
Col19a1-201ENSMUST00000051344 Supt16hQ920B9 1047 aa13.15□□□□□ -0.31
Col19a1-201ENSMUST00000051344 Clip1Q922J3 1391 aa13.14□□□□□ -0.31
Col19a1-201ENSMUST00000051344 Znf710Q3U288 666 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms