RNA–Protein interactions for RNA: ENSMUST00000049055.7

Lysmd3-201, Transcript of LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Lysmd3, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3-201ENSMUST00000049055 NischQ80TM9 1593 aa25.83■■□□□ 1.73
Lysmd3-201ENSMUST00000049055 Gm35339A0A140LHH9 1649 aa25.2■■□□□ 1.62
Lysmd3-201ENSMUST00000049055 Abcc9P70170 1546 aa25.15■■□□□ 1.62
Lysmd3-201ENSMUST00000049055 Rtl1Q7M732 1744 aa24.67■■□□□ 1.54
Lysmd3-201ENSMUST00000049055 Abcc8B2RUS7 1588 aa24.41■■□□□ 1.5
Lysmd3-201ENSMUST00000049055 Rhox8Q6VSS7 320 aa24.35■■□□□ 1.49
Lysmd3-201ENSMUST00000049055 Ccdc180J3QNE4 1664 aa24.32■■□□□ 1.48
Lysmd3-201ENSMUST00000049055 Rpgrip1Q9EPQ2 1331 aa24.02■■□□□ 1.44
Lysmd3-201ENSMUST00000049055 Zcchc6Q5BLK4 1491 aaKnown RBP23.65■■□□□ 1.38
Lysmd3-201ENSMUST00000049055 Acin1Q9JIX8 1338 aaKnown RBP23.4■■□□□ 1.34
Lysmd3-201ENSMUST00000049055 HrcG5E8J6 738 aa23.08■■□□□ 1.28
Lysmd3-201ENSMUST00000049055 Dcaf1Q80TR8 1506 aa23.07■■□□□ 1.28
Lysmd3-201ENSMUST00000049055 Ehmt2Q9Z148 1263 aaKnown RBP22.82■■□□□ 1.24
Lysmd3-201ENSMUST00000049055 Pcgf6Q99NA9 353 aa22.72■■□□□ 1.23
Lysmd3-201ENSMUST00000049055 Rb1cc1Q9ESK9 1588 aa22.67■■□□□ 1.22
Lysmd3-201ENSMUST00000049055 Ccdc136Q3TVA9 1136 aa22.53■■□□□ 1.2
Lysmd3-201ENSMUST00000049055 ScribQ80U72 1612 aa22.48■■□□□ 1.19
Lysmd3-201ENSMUST00000049055 Baz1aO88379 1555 aa22.45■■□□□ 1.18
Lysmd3-201ENSMUST00000049055 Trim41Q5NCC3 630 aa22.35■■□□□ 1.17
Lysmd3-201ENSMUST00000049055 Cep164Q5DU05 1446 aa22.23■■□□□ 1.15
Lysmd3-201ENSMUST00000049055 Kdm5dQ62240 1548 aa22.17■■□□□ 1.14
Lysmd3-201ENSMUST00000049055 Supt5hO55201 1082 aaKnown RBP22.17■■□□□ 1.14
Lysmd3-201ENSMUST00000049055 Smarca2Q6DIC0 1577 aa22.01■■□□□ 1.11
Lysmd3-201ENSMUST00000049055 Crybg2B7ZCC2 1516 aa21.95■■□□□ 1.1
Lysmd3-201ENSMUST00000049055 NacadQ5SWP3 1504 aa21.92■■□□□ 1.1
Lysmd3-201ENSMUST00000049055 Neurod1Q60867 357 aa21.84■■□□□ 1.09
Lysmd3-201ENSMUST00000049055 Rsf1E9PWW9 1441 aaKnown RBP21.73■■□□□ 1.07
Lysmd3-201ENSMUST00000049055 NefmP08553 848 aa21.71■■□□□ 1.07
Lysmd3-201ENSMUST00000049055 Chic1Q8CBW7 227 aa21.64■■□□□ 1.06
Lysmd3-201ENSMUST00000049055 Zeb1Q64318 1117 aa21.61■■□□□ 1.05
Lysmd3-201ENSMUST00000049055 Mier1Q5UAK0 511 aa21.56■■□□□ 1.04
Lysmd3-201ENSMUST00000049055 Las1lA2BE28 776 aaKnown RBP21.52■■□□□ 1.04
Lysmd3-201ENSMUST00000049055 Gab3Q8BSM5 595 aa21.51■■□□□ 1.03
Lysmd3-201ENSMUST00000049055 Cngb1E1AZ71 1325 aa21.5■■□□□ 1.03
Lysmd3-201ENSMUST00000049055 Ccdc88bQ4QRL3 1481 aa21.49■■□□□ 1.03
Lysmd3-201ENSMUST00000049055 Brd4Q9ESU6 1400 aaKnown RBP21.48■■□□□ 1.03
Lysmd3-201ENSMUST00000049055 Sall2Q9QX96 1004 aa21.47■■□□□ 1.03
Lysmd3-201ENSMUST00000049055 Golga3P55937 1487 aa21.45■■□□□ 1.02
Lysmd3-201ENSMUST00000049055 Sycp2Q9CUU3 1500 aa21.43■■□□□ 1.02
Lysmd3-201ENSMUST00000049055 Anks4bQ8K3X6 423 aa21.34■■□□□ 1.01
Lysmd3-201ENSMUST00000049055 Cecr2E9Q2Z1 1453 aa21.28■■□□□ 1
Lysmd3-201ENSMUST00000049055 Synj1Q8CHC4 1574 aa21.25■□□□□ 0.99
Lysmd3-201ENSMUST00000049055 1700123L14RikQ3V2K7 440 aa21.19■□□□□ 0.98
Lysmd3-201ENSMUST00000049055 Top2bQ64511 1612 aa21.16■□□□□ 0.98
Lysmd3-201ENSMUST00000049055 Csrnp3P59055 597 aa21.1■□□□□ 0.97
Lysmd3-201ENSMUST00000049055 CftrP26361 1476 aa21.06■□□□□ 0.96
Lysmd3-201ENSMUST00000049055 Aebp2Q9Z248 504 aaKnown RBP21.05■□□□□ 0.96
Lysmd3-201ENSMUST00000049055 Rapgef2Q8CHG7 1496 aa21.01■□□□□ 0.95
Lysmd3-201ENSMUST00000049055 ClspnQ80YR7 1315 aa21.01■□□□□ 0.95
Lysmd3-201ENSMUST00000049055 Wdr66E9Q743 1299 aa20.99■□□□□ 0.95
Lysmd3-201ENSMUST00000049055 UbtfP25976 765 aaKnown RBP20.98■□□□□ 0.95
Lysmd3-201ENSMUST00000049055 Cdk11bP24788 784 aaKnown RBP20.96■□□□□ 0.95
Lysmd3-201ENSMUST00000049055 Aplp2Q06335 707 aa20.92■□□□□ 0.94
Lysmd3-201ENSMUST00000049055 Cttnbp2B9EJA2 1648 aa20.92■□□□□ 0.94
Lysmd3-201ENSMUST00000049055 Nop58Q6DFW4 536 aaKnown RBP20.92■□□□□ 0.94
Lysmd3-201ENSMUST00000049055 Esf1Q3V1V3 845 aaKnown RBP20.91■□□□□ 0.94
Lysmd3-201ENSMUST00000049055 BicraF8VPZ9 1578 aa20.89■□□□□ 0.93
Lysmd3-201ENSMUST00000049055 Cc2d2aQ8CFW7 1633 aa20.89■□□□□ 0.93
Lysmd3-201ENSMUST00000049055 Top2aQ01320 1528 aaKnown RBP20.81■□□□□ 0.92
Lysmd3-201ENSMUST00000049055 Cep162Q6ZQ06 1403 aa20.79■□□□□ 0.92
Lysmd3-201ENSMUST00000049055 Myt1Q8CFC2 1127 aa20.79■□□□□ 0.92
Lysmd3-201ENSMUST00000049055 Fmn1Q05860 1466 aa20.77■□□□□ 0.92
Lysmd3-201ENSMUST00000049055 TonslQ6NZL6 1363 aa20.76■□□□□ 0.91
Lysmd3-201ENSMUST00000049055 CenpbP27790 599 aa20.71■□□□□ 0.91
Lysmd3-201ENSMUST00000049055 Ppargc1bQ8VHJ7 1014 aa20.64■□□□□ 0.89
Lysmd3-201ENSMUST00000049055 Ncapd3Q6ZQK0 1506 aa20.63■□□□□ 0.89
Lysmd3-201ENSMUST00000049055 Smarca4Q3TKT4 1613 aaKnown RBP20.62■□□□□ 0.89
Lysmd3-201ENSMUST00000049055 Eif4g1Q6NZJ6 1600 aaKnown RBP20.61■□□□□ 0.89
Lysmd3-201ENSMUST00000049055 Myt1lP97500 1187 aa20.58■□□□□ 0.89
Lysmd3-201ENSMUST00000049055 Clip1Q922J3 1391 aa20.55■□□□□ 0.88
Lysmd3-201ENSMUST00000049055 Plekhg3Q4VAC9 1341 aa20.46■□□□□ 0.87
Lysmd3-201ENSMUST00000049055 Gm38655A0A286YDK6 273 aa20.43■□□□□ 0.86
Lysmd3-201ENSMUST00000049055 Npm2Q80W85 207 aa20.42■□□□□ 0.86
Lysmd3-201ENSMUST00000049055 Kdm5bQ80Y84 1544 aa20.4■□□□□ 0.86
Lysmd3-201ENSMUST00000049055 Tnnt3Q9QZ47 272 aa20.31■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 Arhgap35Q91YM2 1499 aa20.3■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 Dnajc5bQ9CQ94 199 aa20.3■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 Arap1Q4LDD4 1452 aa20.28■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 TnnQ80Z71 1560 aa20.28■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 Iqgap2Q3UQ44 1575 aa20.27■□□□□ 0.84
Lysmd3-201ENSMUST00000049055 Hnrnpul2Q00PI9 745 aaKnown RBP20.26■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 Eea1Q8BL66 1411 aa20.24■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 Ccdc18Q640L5 1455 aa20.23■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 Arhgef5E9Q7D5 1581 aa20.23■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 NrkQ9R0G8 1455 aa20.22■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 TchhA0A0B4J1F9 1599 aa20.21■□□□□ 0.83
Lysmd3-201ENSMUST00000049055 Eid3Q3V124 375 aa20.18■□□□□ 0.82
Lysmd3-201ENSMUST00000049055 PtprkP35822 1457 aa20.15■□□□□ 0.82
Lysmd3-201ENSMUST00000049055 SafbD3YXK2 937 aaKnown RBP20.15■□□□□ 0.82
Lysmd3-201ENSMUST00000049055 Fam71e1A1L3C1 212 aa20.14■□□□□ 0.82
Lysmd3-201ENSMUST00000049055 Baz1bQ9Z277 1479 aa20.13■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Pds5bQ4VA53 1446 aaKnown RBP20.13■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Rpap1Q80TE0 1409 aa20.1■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Tiam1Q60610 1591 aa20.09■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Setd5Q5XJV7 1441 aa20.09■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Map3k1P53349 1493 aa20.08■□□□□ 0.81
Lysmd3-201ENSMUST00000049055 Ap3b1Q9Z1T1 1105 aa20.07■□□□□ 0.8
Lysmd3-201ENSMUST00000049055 Thoc2B1AZI6 1594 aaKnown RBP20.06■□□□□ 0.8
Lysmd3-201ENSMUST00000049055 Mapk8ip2Q9ERE9 830 aa20.05■□□□□ 0.8
Lysmd3-201ENSMUST00000049055 Znf710Q3U288 666 aa20.04■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 128.4 ms