RNA–Protein interactions for RNA: ENSMUST00000047830.7

Hoxd3-201, Transcript of Homeobox protein Hox-D3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Hoxd3, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3-201ENSMUST00000047830 NischQ80TM9 1593 aa34,83■■■■□ 3,17
Hoxd3-201ENSMUST00000047830 Gm35339A0A140LHH9 1649 aa34,18■■■■□ 3,06
Hoxd3-201ENSMUST00000047830 Abcc9P70170 1546 aa33,98■■■■□ 3,03
Hoxd3-201ENSMUST00000047830 Rtl1Q7M732 1744 aa33,56■■■□□ 2,96
Hoxd3-201ENSMUST00000047830 Ccdc180J3QNE4 1664 aa32,96■■■□□ 2,87
Hoxd3-201ENSMUST00000047830 Abcc8B2RUS7 1588 aa32,95■■■□□ 2,86
Hoxd3-201ENSMUST00000047830 Rpgrip1Q9EPQ2 1331 aa32,63■■■□□ 2,81
Hoxd3-201ENSMUST00000047830 Rhox8Q6VSS7 320 aa32,56■■■□□ 2,8
Hoxd3-201ENSMUST00000047830 Zcchc6Q5BLK4 1491 aaKnown RBP31,87■■■□□ 2,69
Hoxd3-201ENSMUST00000047830 Acin1Q9JIX8 1338 aaKnown RBP31,5■■■□□ 2,63
Hoxd3-201ENSMUST00000047830 ScribQ80U72 1612 aa31,4■■■□□ 2,62
Hoxd3-201ENSMUST00000047830 HrcG5E8J6 738 aa31,27■■■□□ 2,6
Hoxd3-201ENSMUST00000047830 Dcaf1Q80TR8 1506 aa31,2■■■□□ 2,58
Hoxd3-201ENSMUST00000047830 Rb1cc1Q9ESK9 1588 aa30,55■■■□□ 2,48
Hoxd3-201ENSMUST00000047830 Kdm5dQ62240 1548 aa30,5■■■□□ 2,47
Hoxd3-201ENSMUST00000047830 Pcgf6Q99NA9 353 aa30,44■■■□□ 2,46
Hoxd3-201ENSMUST00000047830 Baz1aO88379 1555 aa30,34■■■□□ 2,45
Hoxd3-201ENSMUST00000047830 NacadQ5SWP3 1504 aa30,33■■■□□ 2,45
Hoxd3-201ENSMUST00000047830 Ehmt2Q9Z148 1263 aaKnown RBP30,19■■■□□ 2,42
Hoxd3-201ENSMUST00000047830 Trim41Q5NCC3 630 aa30,06■■■□□ 2,4
Hoxd3-201ENSMUST00000047830 Ccdc136Q3TVA9 1136 aa30,04■■■□□ 2,4
Hoxd3-201ENSMUST00000047830 Cep164Q5DU05 1446 aa30,02■■■□□ 2,4
Hoxd3-201ENSMUST00000047830 Crybg2B7ZCC2 1516 aa29,89■■■□□ 2,38
Hoxd3-201ENSMUST00000047830 Sycp2Q9CUU3 1500 aa29,76■■■□□ 2,36
Hoxd3-201ENSMUST00000047830 Smarca2Q6DIC0 1577 aa29,73■■■□□ 2,35
Hoxd3-201ENSMUST00000047830 Supt5hO55201 1082 aaKnown RBP29,6■■■□□ 2,33
Hoxd3-201ENSMUST00000047830 NefmP08553 848 aa29,37■■■□□ 2,29
Hoxd3-201ENSMUST00000047830 BicraF8VPZ9 1578 aa29,36■■■□□ 2,29
Hoxd3-201ENSMUST00000047830 Neurod1Q60867 357 aa29,19■■■□□ 2,26
Hoxd3-201ENSMUST00000047830 Las1lA2BE28 776 aaKnown RBP29,15■■■□□ 2,26
Hoxd3-201ENSMUST00000047830 Rsf1E9PWW9 1441 aaKnown RBP29,14■■■□□ 2,26
Hoxd3-201ENSMUST00000047830 Brd4Q9ESU6 1400 aaKnown RBP29,04■■■□□ 2,24
Hoxd3-201ENSMUST00000047830 Golga3P55937 1487 aa28,94■■■□□ 2,22
Hoxd3-201ENSMUST00000047830 Cngb1E1AZ71 1325 aa28,93■■■□□ 2,22
Hoxd3-201ENSMUST00000047830 Chic1Q8CBW7 227 aa28,93■■■□□ 2,22
Hoxd3-201ENSMUST00000047830 Mier1Q5UAK0 511 aa28,89■■■□□ 2,22
Hoxd3-201ENSMUST00000047830 Ccdc88bQ4QRL3 1481 aa28,81■■■□□ 2,2
Hoxd3-201ENSMUST00000047830 Zeb1Q64318 1117 aa28,8■■■□□ 2,2
Hoxd3-201ENSMUST00000047830 Anks4bQ8K3X6 423 aa28,78■■■□□ 2,2
Hoxd3-201ENSMUST00000047830 Sall2Q9QX96 1004 aa28,73■■■□□ 2,19
Hoxd3-201ENSMUST00000047830 Gab3Q8BSM5 595 aa28,65■■■□□ 2,18
Hoxd3-201ENSMUST00000047830 Top2bQ64511 1612 aa28,58■■■□□ 2,17
Hoxd3-201ENSMUST00000047830 Synj1Q8CHC4 1574 aa28,58■■■□□ 2,17
Hoxd3-201ENSMUST00000047830 Cecr2E9Q2Z1 1453 aa28,55■■■□□ 2,16
Hoxd3-201ENSMUST00000047830 CftrP26361 1476 aa28,39■■■□□ 2,14
Hoxd3-201ENSMUST00000047830 Myt1Q8CFC2 1127 aa28,38■■■□□ 2,13
Hoxd3-201ENSMUST00000047830 1700123L14RikQ3V2K7 440 aa28,35■■■□□ 2,13
Hoxd3-201ENSMUST00000047830 Rapgef2Q8CHG7 1496 aa28,35■■■□□ 2,13
Hoxd3-201ENSMUST00000047830 ClspnQ80YR7 1315 aa28,3■■■□□ 2,12
Hoxd3-201ENSMUST00000047830 Cttnbp2B9EJA2 1648 aa28,28■■■□□ 2,12
Hoxd3-201ENSMUST00000047830 Aplp2Q06335 707 aa28,26■■■□□ 2,11
Hoxd3-201ENSMUST00000047830 Pds5bQ4VA53 1446 aaKnown RBP28,23■■■□□ 2,11
Hoxd3-201ENSMUST00000047830 Cdk11bP24788 784 aaKnown RBP28,2■■■□□ 2,1
Hoxd3-201ENSMUST00000047830 Csrnp3P59055 597 aa28,16■■■□□ 2,1
Hoxd3-201ENSMUST00000047830 Smarca4Q3TKT4 1613 aaKnown RBP28,15■■■□□ 2,1
Hoxd3-201ENSMUST00000047830 Atad2bE9Q166 1460 aaKnown RBP28,13■■■□□ 2,09
Hoxd3-201ENSMUST00000047830 Aebp2Q9Z248 504 aaKnown RBP28,1■■■□□ 2,09
Hoxd3-201ENSMUST00000047830 Nop58Q6DFW4 536 aaKnown RBP28,09■■■□□ 2,09
Hoxd3-201ENSMUST00000047830 Fmn1Q05860 1466 aa28,09■■■□□ 2,09
Hoxd3-201ENSMUST00000047830 Top2aQ01320 1528 aaKnown RBP28,08■■■□□ 2,09
Hoxd3-201ENSMUST00000047830 Cc2d2aQ8CFW7 1633 aa28,05■■■□□ 2,08
Hoxd3-201ENSMUST00000047830 Wdr66E9Q743 1299 aa28,04■■■□□ 2,08
Hoxd3-201ENSMUST00000047830 Dnajc5bQ9CQ94 199 aa28,03■■■□□ 2,08
Hoxd3-201ENSMUST00000047830 Esf1Q3V1V3 845 aaKnown RBP28,02■■■□□ 2,08
Hoxd3-201ENSMUST00000047830 UbtfP25976 765 aaKnown RBP28,01■■■□□ 2,07
Hoxd3-201ENSMUST00000047830 Cep162Q6ZQ06 1403 aa28,01■■■□□ 2,07
Hoxd3-201ENSMUST00000047830 Iqgap2Q3UQ44 1575 aa27,97■■■□□ 2,07
Hoxd3-201ENSMUST00000047830 CenpbP27790 599 aa27,96■■■□□ 2,07
Hoxd3-201ENSMUST00000047830 TonslQ6NZL6 1363 aa27,91■■■□□ 2,06
Hoxd3-201ENSMUST00000047830 Eif4g1Q6NZJ6 1600 aaKnown RBP27,84■■■□□ 2,05
Hoxd3-201ENSMUST00000047830 Ncapd3Q6ZQK0 1506 aa27,81■■■□□ 2,04
Hoxd3-201ENSMUST00000047830 Thoc2B1AZI6 1594 aaKnown RBP27,8■■■□□ 2,04
Hoxd3-201ENSMUST00000047830 Ercc6F8VPZ5 1481 aa27,68■■■□□ 2,02
Hoxd3-201ENSMUST00000047830 Frmpd1A2AKB4 1549 aa27,65■■■□□ 2,02
Hoxd3-201ENSMUST00000047830 Clip1Q922J3 1391 aa27,64■■■□□ 2,01
Hoxd3-201ENSMUST00000047830 Wdr62Q3U3T8 1523 aa27,61■■■□□ 2,01
Hoxd3-201ENSMUST00000047830 Tnnt3Q9QZ47 272 aa27,53■■■□□ 2
Hoxd3-201ENSMUST00000047830 Kdm5bQ80Y84 1544 aa27,48■■□□□ 1,99
Hoxd3-201ENSMUST00000047830 Myt1lP97500 1187 aa27,46■■□□□ 1,99
Hoxd3-201ENSMUST00000047830 TnnQ80Z71 1560 aa27,44■■□□□ 1,98
Hoxd3-201ENSMUST00000047830 Ccdc18Q640L5 1455 aa27,42■■□□□ 1,98
Hoxd3-201ENSMUST00000047830 TchhA0A0B4J1F9 1599 aa27,37■■□□□ 1,97
Hoxd3-201ENSMUST00000047830 Npm2Q80W85 207 aa27,36■■□□□ 1,97
Hoxd3-201ENSMUST00000047830 NrkQ9R0G8 1455 aa27,33■■□□□ 1,97
Hoxd3-201ENSMUST00000047830 Arhgap35Q91YM2 1499 aa27,33■■□□□ 1,97
Hoxd3-201ENSMUST00000047830 Eea1Q8BL66 1411 aa27,31■■□□□ 1,96
Hoxd3-201ENSMUST00000047830 Plekhg3Q4VAC9 1341 aa27,3■■□□□ 1,96
Hoxd3-201ENSMUST00000047830 Arhgef5E9Q7D5 1581 aa27,28■■□□□ 1,96
Hoxd3-201ENSMUST00000047830 Unc13aQ4KUS2 1712 aa27,27■■□□□ 1,96
Hoxd3-201ENSMUST00000047830 Phldb1Q6PDH0 1371 aaKnown RBP27,26■■□□□ 1,95
Hoxd3-201ENSMUST00000047830 Arap1Q4LDD4 1452 aa27,26■■□□□ 1,95
Hoxd3-201ENSMUST00000047830 Ppargc1bQ8VHJ7 1014 aa27,25■■□□□ 1,95
Hoxd3-201ENSMUST00000047830 Fam135aQ6NS59 1506 aa27,25■■□□□ 1,95
Hoxd3-201ENSMUST00000047830 Map3k1P53349 1493 aa27,21■■□□□ 1,95
Hoxd3-201ENSMUST00000047830 Ubl4bQ9CQ84 188 aa27,18■■□□□ 1,94
Hoxd3-201ENSMUST00000047830 Baz1bQ9Z277 1479 aa27,14■■□□□ 1,94
Hoxd3-201ENSMUST00000047830 Tiam1Q60610 1591 aa27,1■■□□□ 1,93
Hoxd3-201ENSMUST00000047830 Stra8P70278 393 aa27,1■■□□□ 1,93
Hoxd3-201ENSMUST00000047830 Hnrnpul2Q00PI9 745 aaKnown RBP27,06■■□□□ 1,92
Hoxd3-201ENSMUST00000047830 Erich3F6QRE9 1637 aa27,02■■□□□ 1,92
Retrieved 100 of 22,080 RNA–protein pairs in 30,9 ms