RNA–Protein interactions for RNA: ENSMUST00000046095.9

Vsx1-201, Transcript of Visual system homeobox 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vsx1, Length 3,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1-201ENSMUST00000046095 Rhox8Q6VSS7 320 aa22.26■■□□□ 1.15
Vsx1-201ENSMUST00000046095 NischQ80TM9 1593 aa21.43■■□□□ 1.02
Vsx1-201ENSMUST00000046095 Ehmt2Q9Z148 1263 aaKnown RBP21.13■□□□□ 0.97
Vsx1-201ENSMUST00000046095 Rpgrip1Q9EPQ2 1331 aa20.77■□□□□ 0.92
Vsx1-201ENSMUST00000046095 Abcc9P70170 1546 aa20.43■□□□□ 0.86
Vsx1-201ENSMUST00000046095 Ccdc136Q3TVA9 1136 aa20.42■□□□□ 0.86
Vsx1-201ENSMUST00000046095 Acin1Q9JIX8 1338 aaKnown RBP20.29■□□□□ 0.84
Vsx1-201ENSMUST00000046095 Ccdc180J3QNE4 1664 aa20.13■□□□□ 0.81
Vsx1-201ENSMUST00000046095 Pcgf6Q99NA9 353 aa19.97■□□□□ 0.79
Vsx1-201ENSMUST00000046095 Rtl1Q7M732 1744 aa19.95■□□□□ 0.78
Vsx1-201ENSMUST00000046095 Abcc8B2RUS7 1588 aa19.93■□□□□ 0.78
Vsx1-201ENSMUST00000046095 Trim41Q5NCC3 630 aa19.9■□□□□ 0.78
Vsx1-201ENSMUST00000046095 Zeb1Q64318 1117 aa19.82■□□□□ 0.76
Vsx1-201ENSMUST00000046095 Gab3Q8BSM5 595 aa19.75■□□□□ 0.75
Vsx1-201ENSMUST00000046095 HrcG5E8J6 738 aa19.68■□□□□ 0.74
Vsx1-201ENSMUST00000046095 Gm35339A0A140LHH9 1649 aa19.65■□□□□ 0.74
Vsx1-201ENSMUST00000046095 Supt5hO55201 1082 aaKnown RBP19.64■□□□□ 0.74
Vsx1-201ENSMUST00000046095 Cngb1E1AZ71 1325 aa19.57■□□□□ 0.72
Vsx1-201ENSMUST00000046095 Wdr66E9Q743 1299 aa19.36■□□□□ 0.69
Vsx1-201ENSMUST00000046095 Zcchc6Q5BLK4 1491 aaKnown RBP19.23■□□□□ 0.67
Vsx1-201ENSMUST00000046095 Neurod1Q60867 357 aa19.21■□□□□ 0.67
Vsx1-201ENSMUST00000046095 Dcaf1Q80TR8 1506 aa19.2■□□□□ 0.66
Vsx1-201ENSMUST00000046095 Las1lA2BE28 776 aaKnown RBP19.2■□□□□ 0.66
Vsx1-201ENSMUST00000046095 Ppargc1bQ8VHJ7 1014 aa19.17■□□□□ 0.66
Vsx1-201ENSMUST00000046095 Esf1Q3V1V3 845 aaKnown RBP19.12■□□□□ 0.65
Vsx1-201ENSMUST00000046095 UbtfP25976 765 aaKnown RBP19.1■□□□□ 0.65
Vsx1-201ENSMUST00000046095 NefmP08553 848 aa19.05■□□□□ 0.64
Vsx1-201ENSMUST00000046095 Mier1Q5UAK0 511 aa19.03■□□□□ 0.64
Vsx1-201ENSMUST00000046095 Myt1lP97500 1187 aa18.98■□□□□ 0.63
Vsx1-201ENSMUST00000046095 Sall2Q9QX96 1004 aa18.94■□□□□ 0.62
Vsx1-201ENSMUST00000046095 Chic1Q8CBW7 227 aa18.92■□□□□ 0.62
Vsx1-201ENSMUST00000046095 Rb1cc1Q9ESK9 1588 aa18.82■□□□□ 0.6
Vsx1-201ENSMUST00000046095 Csrnp3P59055 597 aa18.75■□□□□ 0.59
Vsx1-201ENSMUST00000046095 Cep164Q5DU05 1446 aa18.75■□□□□ 0.59
Vsx1-201ENSMUST00000046095 Cdk11bP24788 784 aaKnown RBP18.72■□□□□ 0.59
Vsx1-201ENSMUST00000046095 Gm38655A0A286YDK6 273 aa18.71■□□□□ 0.59
Vsx1-201ENSMUST00000046095 Npm2Q80W85 207 aa18.69■□□□□ 0.58
Vsx1-201ENSMUST00000046095 Nop58Q6DFW4 536 aaKnown RBP18.69■□□□□ 0.58
Vsx1-201ENSMUST00000046095 CenpbP27790 599 aa18.58■□□□□ 0.56
Vsx1-201ENSMUST00000046095 1700123L14RikQ3V2K7 440 aa18.55■□□□□ 0.56
Vsx1-201ENSMUST00000046095 Aebp2Q9Z248 504 aaKnown RBP18.55■□□□□ 0.56
Vsx1-201ENSMUST00000046095 Anks4bQ8K3X6 423 aa18.5■□□□□ 0.55
Vsx1-201ENSMUST00000046095 Rsf1E9PWW9 1441 aaKnown RBP18.45■□□□□ 0.54
Vsx1-201ENSMUST00000046095 Baz1aO88379 1555 aa18.44■□□□□ 0.54
Vsx1-201ENSMUST00000046095 Plekhg3Q4VAC9 1341 aa18.4■□□□□ 0.54
Vsx1-201ENSMUST00000046095 TonslQ6NZL6 1363 aa18.39■□□□□ 0.54
Vsx1-201ENSMUST00000046095 Ap3b1Q9Z1T1 1105 aa18.37■□□□□ 0.53
Vsx1-201ENSMUST00000046095 ClspnQ80YR7 1315 aa18.37■□□□□ 0.53
Vsx1-201ENSMUST00000046095 Mapk8ip2Q9ERE9 830 aa18.34■□□□□ 0.53
Vsx1-201ENSMUST00000046095 Eid3Q3V124 375 aa18.3■□□□□ 0.52
Vsx1-201ENSMUST00000046095 Kdm5dQ62240 1548 aa18.27■□□□□ 0.52
Vsx1-201ENSMUST00000046095 Slc24a1Q91WD8 1130 aa18.26■□□□□ 0.51
Vsx1-201ENSMUST00000046095 Ccdc88bQ4QRL3 1481 aa18.25■□□□□ 0.51
Vsx1-201ENSMUST00000046095 Il27Q8K3I6 234 aa18.23■□□□□ 0.51
Vsx1-201ENSMUST00000046095 Ube2uB1AUC4 352 aa18.22■□□□□ 0.51
Vsx1-201ENSMUST00000046095 ScribQ80U72 1612 aa18.19■□□□□ 0.5
Vsx1-201ENSMUST00000046095 Brd4Q9ESU6 1400 aaKnown RBP18.18■□□□□ 0.5
Vsx1-201ENSMUST00000046095 Aplp2Q06335 707 aa18.13■□□□□ 0.49
Vsx1-201ENSMUST00000046095 NacadQ5SWP3 1504 aa18.1■□□□□ 0.49
Vsx1-201ENSMUST00000046095 Fam50aQ9WV03 339 aaKnown RBP18.1■□□□□ 0.49
Vsx1-201ENSMUST00000046095 Golga3P55937 1487 aa18.06■□□□□ 0.48
Vsx1-201ENSMUST00000046095 NclP09405 707 aaKnown RBP18.05■□□□□ 0.48
Vsx1-201ENSMUST00000046095 Clip1Q922J3 1391 aa18■□□□□ 0.47
Vsx1-201ENSMUST00000046095 SafbD3YXK2 937 aaKnown RBP17.98■□□□□ 0.47
Vsx1-201ENSMUST00000046095 Myt1Q8CFC2 1127 aa17.95■□□□□ 0.46
Vsx1-201ENSMUST00000046095 Tnnt3Q9QZ47 272 aa17.92■□□□□ 0.46
Vsx1-201ENSMUST00000046095 Lmod2Q3UHZ5 550 aa17.91■□□□□ 0.46
Vsx1-201ENSMUST00000046095 Hnrnpul2Q00PI9 745 aaKnown RBP17.89■□□□□ 0.46
Vsx1-201ENSMUST00000046095 Eif5bQ05D44 1216 aaKnown RBP17.88■□□□□ 0.45
Vsx1-201ENSMUST00000046095 Smarca2Q6DIC0 1577 aa17.88■□□□□ 0.45
Vsx1-201ENSMUST00000046095 Cecr2E9Q2Z1 1453 aa17.88■□□□□ 0.45
Vsx1-201ENSMUST00000046095 Fam71e1A1L3C1 212 aa17.88■□□□□ 0.45
Vsx1-201ENSMUST00000046095 Stra8P70278 393 aa17.82■□□□□ 0.44
Vsx1-201ENSMUST00000046095 Ttbk1Q6PCN3 1308 aa17.8■□□□□ 0.44
Vsx1-201ENSMUST00000046095 DiexfQ8BTT6 772 aaKnown RBP17.74■□□□□ 0.43
Vsx1-201ENSMUST00000046095 Pelp1Q9DBD5 1123 aaKnown RBP17.73■□□□□ 0.43
Vsx1-201ENSMUST00000046095 Anp32aO35381 247 aa17.65■□□□□ 0.42
Vsx1-201ENSMUST00000046095 Synj1Q8CHC4 1574 aa17.65■□□□□ 0.42
Vsx1-201ENSMUST00000046095 Cep162Q6ZQ06 1403 aa17.64■□□□□ 0.41
Vsx1-201ENSMUST00000046095 Crybg2B7ZCC2 1516 aa17.59■□□□□ 0.41
Vsx1-201ENSMUST00000046095 Sycp2Q9CUU3 1500 aa17.58■□□□□ 0.41
Vsx1-201ENSMUST00000046095 Calr4Q3TQS0 420 aa17.58■□□□□ 0.4
Vsx1-201ENSMUST00000046095 Rapgef2Q8CHG7 1496 aa17.56■□□□□ 0.4
Vsx1-201ENSMUST00000046095 CftrP26361 1476 aa17.56■□□□□ 0.4
Vsx1-201ENSMUST00000046095 Setd5Q5XJV7 1441 aa17.53■□□□□ 0.4
Vsx1-201ENSMUST00000046095 BlmO88700 1416 aa17.53■□□□□ 0.4
Vsx1-201ENSMUST00000046095 NrdcQ8BHG1 1161 aa17.51■□□□□ 0.39
Vsx1-201ENSMUST00000046095 Ppp4r2Q0VGB7 417 aa17.5■□□□□ 0.39
Vsx1-201ENSMUST00000046095 P3h3Q8CG70 732 aa17.46■□□□□ 0.39
Vsx1-201ENSMUST00000046095 Chic2Q9D9G3 165 aa17.46■□□□□ 0.39
Vsx1-201ENSMUST00000046095 Hspa5P20029 655 aaKnown RBP17.45■□□□□ 0.38
Vsx1-201ENSMUST00000046095 Bcl11aQ9QYE3 773 aa17.44■□□□□ 0.38
Vsx1-201ENSMUST00000046095 Sin3aQ60520 1274 aaKnown RBP17.4■□□□□ 0.38
Vsx1-201ENSMUST00000046095 Eea1Q8BL66 1411 aa17.39■□□□□ 0.38
Vsx1-201ENSMUST00000046095 Mrs2Q5NCE8 434 aa17.37■□□□□ 0.37
Vsx1-201ENSMUST00000046095 Fmn1Q05860 1466 aa17.36■□□□□ 0.37
Vsx1-201ENSMUST00000046095 Amer1Q7TS75 1132 aa17.33■□□□□ 0.36
Vsx1-201ENSMUST00000046095 Nolc1E9Q5C9 702 aaKnown RBP17.32■□□□□ 0.36
Vsx1-201ENSMUST00000046095 Zbtb4Q5F293 982 aa17.32■□□□□ 0.36
Vsx1-201ENSMUST00000046095 Wdr43Q6ZQL4 677 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms