RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Rhox8Q6VSS7 320 aa24.76■■□□□ 1.55
Ccdc85a-201ENSMUST00000042534 Rpgrip1Q9EPQ2 1331 aa23.1■■□□□ 1.29
Ccdc85a-201ENSMUST00000042534 Ehmt2Q9Z148 1263 aaKnown RBP22.16■■□□□ 1.14
Ccdc85a-201ENSMUST00000042534 NischQ80TM9 1593 aa22.09■■□□□ 1.13
Ccdc85a-201ENSMUST00000042534 Ccdc136Q3TVA9 1136 aa21.99■■□□□ 1.11
Ccdc85a-201ENSMUST00000042534 Las1lA2BE28 776 aaKnown RBP21.93■■□□□ 1.1
Ccdc85a-201ENSMUST00000042534 Cngb1E1AZ71 1325 aa21.87■■□□□ 1.09
Ccdc85a-201ENSMUST00000042534 Esf1Q3V1V3 845 aaKnown RBP21.78■■□□□ 1.08
Ccdc85a-201ENSMUST00000042534 Trim41Q5NCC3 630 aa21.75■■□□□ 1.07
Ccdc85a-201ENSMUST00000042534 Wdr66E9Q743 1299 aa21.64■■□□□ 1.05
Ccdc85a-201ENSMUST00000042534 Gab3Q8BSM5 595 aa21.5■■□□□ 1.03
Ccdc85a-201ENSMUST00000042534 Zeb1Q64318 1117 aa21.45■■□□□ 1.02
Ccdc85a-201ENSMUST00000042534 Pelp1Q9DBD5 1123 aaKnown RBP21.35■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Acin1Q9JIX8 1338 aaKnown RBP21.35■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Npm2Q80W85 207 aa21.34■■□□□ 1.01
Ccdc85a-201ENSMUST00000042534 Ube2uB1AUC4 352 aa21.28■■□□□ 1
Ccdc85a-201ENSMUST00000042534 Ccdc180J3QNE4 1664 aa21.25■□□□□ 0.99
Ccdc85a-201ENSMUST00000042534 NefmP08553 848 aa21.15■□□□□ 0.98
Ccdc85a-201ENSMUST00000042534 Myt1lP97500 1187 aa21.13■□□□□ 0.97
Ccdc85a-201ENSMUST00000042534 Rtl1Q7M732 1744 aa21.1■□□□□ 0.97
Ccdc85a-201ENSMUST00000042534 HrcG5E8J6 738 aa21.05■□□□□ 0.96
Ccdc85a-201ENSMUST00000042534 CenpbP27790 599 aa20.86■□□□□ 0.93
Ccdc85a-201ENSMUST00000042534 UbtfP25976 765 aaKnown RBP20.82■□□□□ 0.92
Ccdc85a-201ENSMUST00000042534 Stra8P70278 393 aa20.8■□□□□ 0.92
Ccdc85a-201ENSMUST00000042534 Abcc9P70170 1546 aa20.66■□□□□ 0.9
Ccdc85a-201ENSMUST00000042534 Pcgf6Q99NA9 353 aa20.49■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Cdk11bP24788 784 aaKnown RBP20.47■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Zcchc6Q5BLK4 1491 aaKnown RBP20.47■□□□□ 0.87
Ccdc85a-201ENSMUST00000042534 Il27Q8K3I6 234 aa20.32■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Slc24a1Q91WD8 1130 aa20.32■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Tnnt3Q9QZ47 272 aa20.29■□□□□ 0.84
Ccdc85a-201ENSMUST00000042534 Myt1Q8CFC2 1127 aa20.23■□□□□ 0.83
Ccdc85a-201ENSMUST00000042534 Nop58Q6DFW4 536 aaKnown RBP20.23■□□□□ 0.83
Ccdc85a-201ENSMUST00000042534 Amer1Q7TS75 1132 aa20.18■□□□□ 0.82
Ccdc85a-201ENSMUST00000042534 Fam50aQ9WV03 339 aaKnown RBP20.14■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Abcc8B2RUS7 1588 aa20.13■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 NrdcQ8BHG1 1161 aa20.12■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 NclP09405 707 aaKnown RBP20.11■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Anp32bQ9EST5 272 aaKnown RBP20.11■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 TonslQ6NZL6 1363 aa20.1■□□□□ 0.81
Ccdc85a-201ENSMUST00000042534 Supt5hO55201 1082 aaKnown RBP20.08■□□□□ 0.8
Ccdc85a-201ENSMUST00000042534 Ap3b1Q9Z1T1 1105 aa20.08■□□□□ 0.8
Ccdc85a-201ENSMUST00000042534 Mier1Q5UAK0 511 aa20■□□□□ 0.79
Ccdc85a-201ENSMUST00000042534 Gm35339A0A140LHH9 1649 aa19.95■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 NeflP08551 543 aa19.91■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 Neurod1Q60867 357 aa19.91■□□□□ 0.78
Ccdc85a-201ENSMUST00000042534 Ppargc1bQ8VHJ7 1014 aa19.81■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Eif5bQ05D44 1216 aaKnown RBP19.79■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 ClspnQ80YR7 1315 aa19.78■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Rtl5Q5DTT4 599 aa19.78■□□□□ 0.76
Ccdc85a-201ENSMUST00000042534 Dcaf1Q80TR8 1506 aa19.74■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 4933416C03RikQ3V063 378 aa19.72■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 Os9Q8K2C7 672 aa19.71■□□□□ 0.75
Ccdc85a-201ENSMUST00000042534 Brd4Q9ESU6 1400 aaKnown RBP19.68■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Ttbk1Q6PCN3 1308 aa19.67■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Cep164Q5DU05 1446 aa19.67■□□□□ 0.74
Ccdc85a-201ENSMUST00000042534 Npm1Q61937 292 aaKnown RBP19.64■□□□□ 0.73
Ccdc85a-201ENSMUST00000042534 Plekhg3Q4VAC9 1341 aa19.63■□□□□ 0.73
Ccdc85a-201ENSMUST00000042534 Lmod2Q3UHZ5 550 aa19.55■□□□□ 0.72
Ccdc85a-201ENSMUST00000042534 4930567H17RikQ3V0K5 233 aa19.51■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Anp32aO35381 247 aa19.49■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Rb1cc1Q9ESK9 1588 aa19.47■□□□□ 0.71
Ccdc85a-201ENSMUST00000042534 Clip1Q922J3 1391 aa19.45■□□□□ 0.7
Ccdc85a-201ENSMUST00000042534 Chic1Q8CBW7 227 aa19.39■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Ccer2J3QPU5 274 aa19.38■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Anks4bQ8K3X6 423 aa19.37■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Sall2Q9QX96 1004 aa19.36■□□□□ 0.69
Ccdc85a-201ENSMUST00000042534 Hdac5Q9Z2V6 1113 aa19.29■□□□□ 0.68
Ccdc85a-201ENSMUST00000042534 Eid3Q3V124 375 aa19.26■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Hnrnpul2Q00PI9 745 aaKnown RBP19.26■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Zbtb7cQ8VCZ7 619 aa19.25■□□□□ 0.67
Ccdc85a-201ENSMUST00000042534 Aplp2Q06335 707 aa19.19■□□□□ 0.66
Ccdc85a-201ENSMUST00000042534 Nlrp6Q91WS2 869 aa19.15■□□□□ 0.66
Ccdc85a-201ENSMUST00000042534 Mapk8ip2Q9ERE9 830 aa19.14■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 Csrnp3P59055 597 aa19.11■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 NacadQ5SWP3 1504 aa19.1■□□□□ 0.65
Ccdc85a-201ENSMUST00000042534 DaxxO35613 739 aa19.07■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Baz1aO88379 1555 aa19.06■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Erich6D3Z6S9 713 aa19.05■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Zbtb4Q5F293 982 aa19.03■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Upf2A2AT37 1269 aaKnown RBP19.02■□□□□ 0.64
Ccdc85a-201ENSMUST00000042534 Calr4Q3TQS0 420 aa19.02■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Gm13697A2AK42 830 aa19.01■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 DiexfQ8BTT6 772 aaKnown RBP19■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 BlmO88700 1416 aa18.99■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Golga3P55937 1487 aa18.99■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Gm38655A0A286YDK6 273 aa18.96■□□□□ 0.63
Ccdc85a-201ENSMUST00000042534 Ubl4bQ9CQ84 188 aa18.95■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Setd5Q5XJV7 1441 aa18.92■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Atp1b4Q99ME6 356 aa18.92■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Ifnlr1Q8CGK5 535 aa18.91■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Polr3glQ8R0C0 218 aa18.89■□□□□ 0.62
Ccdc85a-201ENSMUST00000042534 Ppp4r2Q0VGB7 417 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Clstn2Q9ER65 966 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Chic2Q9D9G3 165 aa18.88■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Fkbp15Q6P9Q6 1216 aaKnown RBP18.87■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Mrs2Q5NCE8 434 aa18.86■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Wdr43Q6ZQL4 677 aaKnown RBP18.84■□□□□ 0.61
Ccdc85a-201ENSMUST00000042534 Prdm10Q3UTQ7 1184 aa18.81■□□□□ 0.6
Ccdc85a-201ENSMUST00000042534 Rsf1E9PWW9 1441 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 109.7 ms