RNA–Protein interactions for RNA: ENSMUST00000041342.11

Cacna1b-201, Transcript of Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cacna1b, Length 6,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1b-201ENSMUST00000041342 Rhox8Q6VSS7 320 aa26.66■■□□□ 1.86
Cacna1b-201ENSMUST00000041342 NischQ80TM9 1593 aa25.83■■□□□ 1.73
Cacna1b-201ENSMUST00000041342 Abcc9P70170 1546 aa24.54■■□□□ 1.52
Cacna1b-201ENSMUST00000041342 Ccdc136Q3TVA9 1136 aa24.17■■□□□ 1.46
Cacna1b-201ENSMUST00000041342 Rpgrip1Q9EPQ2 1331 aa24.11■■□□□ 1.45
Cacna1b-201ENSMUST00000041342 Abcc8B2RUS7 1588 aa24■■□□□ 1.43
Cacna1b-201ENSMUST00000041342 Rtl1Q7M732 1744 aa23.91■■□□□ 1.42
Cacna1b-201ENSMUST00000041342 Ehmt2Q9Z148 1263 aaKnown RBP23.91■■□□□ 1.42
Cacna1b-201ENSMUST00000041342 Gm35339A0A140LHH9 1649 aa23.9■■□□□ 1.42
Cacna1b-201ENSMUST00000041342 Ccdc180J3QNE4 1664 aa23.82■■□□□ 1.4
Cacna1b-201ENSMUST00000041342 Trim41Q5NCC3 630 aa23.63■■□□□ 1.37
Cacna1b-201ENSMUST00000041342 Cngb1E1AZ71 1325 aa23.6■■□□□ 1.37
Cacna1b-201ENSMUST00000041342 Esf1Q3V1V3 845 aaKnown RBP23.45■■□□□ 1.34
Cacna1b-201ENSMUST00000041342 Gab3Q8BSM5 595 aa23.27■■□□□ 1.32
Cacna1b-201ENSMUST00000041342 HrcG5E8J6 738 aa23.18■■□□□ 1.3
Cacna1b-201ENSMUST00000041342 Zcchc6Q5BLK4 1491 aaKnown RBP23.08■■□□□ 1.28
Cacna1b-201ENSMUST00000041342 Acin1Q9JIX8 1338 aaKnown RBP23.07■■□□□ 1.28
Cacna1b-201ENSMUST00000041342 Npm2Q80W85 207 aa22.79■■□□□ 1.24
Cacna1b-201ENSMUST00000041342 Rb1cc1Q9ESK9 1588 aa22.72■■□□□ 1.23
Cacna1b-201ENSMUST00000041342 Zeb1Q64318 1117 aa22.72■■□□□ 1.23
Cacna1b-201ENSMUST00000041342 Myt1lP97500 1187 aa22.7■■□□□ 1.22
Cacna1b-201ENSMUST00000041342 Las1lA2BE28 776 aaKnown RBP22.66■■□□□ 1.22
Cacna1b-201ENSMUST00000041342 Wdr66E9Q743 1299 aa22.59■■□□□ 1.21
Cacna1b-201ENSMUST00000041342 Dcaf1Q80TR8 1506 aa22.42■■□□□ 1.18
Cacna1b-201ENSMUST00000041342 NefmP08553 848 aa22.41■■□□□ 1.18
Cacna1b-201ENSMUST00000041342 UbtfP25976 765 aaKnown RBP22.4■■□□□ 1.18
Cacna1b-201ENSMUST00000041342 NacadQ5SWP3 1504 aa22.32■■□□□ 1.16
Cacna1b-201ENSMUST00000041342 Baz1aO88379 1555 aa22.28■■□□□ 1.16
Cacna1b-201ENSMUST00000041342 Brd4Q9ESU6 1400 aaKnown RBP22.17■■□□□ 1.14
Cacna1b-201ENSMUST00000041342 Ube2uB1AUC4 352 aa22.15■■□□□ 1.14
Cacna1b-201ENSMUST00000041342 Il27Q8K3I6 234 aa22.15■■□□□ 1.14
Cacna1b-201ENSMUST00000041342 Kdm5dQ62240 1548 aa22.14■■□□□ 1.13
Cacna1b-201ENSMUST00000041342 Pcgf6Q99NA9 353 aa22.11■■□□□ 1.13
Cacna1b-201ENSMUST00000041342 Cep164Q5DU05 1446 aa22.1■■□□□ 1.13
Cacna1b-201ENSMUST00000041342 Chic1Q8CBW7 227 aa21.97■■□□□ 1.11
Cacna1b-201ENSMUST00000041342 Mier1Q5UAK0 511 aa21.89■■□□□ 1.09
Cacna1b-201ENSMUST00000041342 Ap3b1Q9Z1T1 1105 aa21.85■■□□□ 1.09
Cacna1b-201ENSMUST00000041342 Supt5hO55201 1082 aaKnown RBP21.81■■□□□ 1.08
Cacna1b-201ENSMUST00000041342 ScribQ80U72 1612 aa21.75■■□□□ 1.07
Cacna1b-201ENSMUST00000041342 Golga3P55937 1487 aa21.62■■□□□ 1.05
Cacna1b-201ENSMUST00000041342 Fam50aQ9WV03 339 aaKnown RBP21.58■■□□□ 1.04
Cacna1b-201ENSMUST00000041342 TonslQ6NZL6 1363 aa21.56■■□□□ 1.04
Cacna1b-201ENSMUST00000041342 Plekhg3Q4VAC9 1341 aa21.56■■□□□ 1.04
Cacna1b-201ENSMUST00000041342 Cdk11bP24788 784 aaKnown RBP21.53■■□□□ 1.04
Cacna1b-201ENSMUST00000041342 Sycp2Q9CUU3 1500 aa21.5■■□□□ 1.03
Cacna1b-201ENSMUST00000041342 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Cacna1b-201ENSMUST00000041342 Ppargc1bQ8VHJ7 1014 aa21.47■■□□□ 1.03
Cacna1b-201ENSMUST00000041342 Rsf1E9PWW9 1441 aaKnown RBP21.46■■□□□ 1.03
Cacna1b-201ENSMUST00000041342 Npm1Q61937 292 aaKnown RBP21.46■■□□□ 1.03
Cacna1b-201ENSMUST00000041342 Clip1Q922J3 1391 aa21.41■■□□□ 1.02
Cacna1b-201ENSMUST00000041342 Nop58Q6DFW4 536 aaKnown RBP21.4■■□□□ 1.02
Cacna1b-201ENSMUST00000041342 Stra8P70278 393 aa21.39■■□□□ 1.01
Cacna1b-201ENSMUST00000041342 Smarca2Q6DIC0 1577 aa21.38■■□□□ 1.01
Cacna1b-201ENSMUST00000041342 NclP09405 707 aaKnown RBP21.34■■□□□ 1.01
Cacna1b-201ENSMUST00000041342 CenpbP27790 599 aa21.3■■□□□ 1
Cacna1b-201ENSMUST00000041342 Lmod2Q3UHZ5 550 aa21.3■■□□□ 1
Cacna1b-201ENSMUST00000041342 Slc24a1Q91WD8 1130 aa21.26■□□□□ 0.99
Cacna1b-201ENSMUST00000041342 Ccdc88bQ4QRL3 1481 aa21.23■□□□□ 0.99
Cacna1b-201ENSMUST00000041342 ClspnQ80YR7 1315 aa21.23■□□□□ 0.99
Cacna1b-201ENSMUST00000041342 Cecr2E9Q2Z1 1453 aa21.18■□□□□ 0.98
Cacna1b-201ENSMUST00000041342 Pelp1Q9DBD5 1123 aaKnown RBP21.18■□□□□ 0.98
Cacna1b-201ENSMUST00000041342 Sall2Q9QX96 1004 aa21.16■□□□□ 0.98
Cacna1b-201ENSMUST00000041342 Neurod1Q60867 357 aa21.15■□□□□ 0.98
Cacna1b-201ENSMUST00000041342 Ubl4bQ9CQ84 188 aa21.1■□□□□ 0.97
Cacna1b-201ENSMUST00000041342 Synj1Q8CHC4 1574 aa21.08■□□□□ 0.96
Cacna1b-201ENSMUST00000041342 CftrP26361 1476 aa21.06■□□□□ 0.96
Cacna1b-201ENSMUST00000041342 Eid3Q3V124 375 aa21.05■□□□□ 0.96
Cacna1b-201ENSMUST00000041342 Kif15Q6P9L6 1387 aa21.04■□□□□ 0.96
Cacna1b-201ENSMUST00000041342 Tnnt3Q9QZ47 272 aa21.03■□□□□ 0.96
Cacna1b-201ENSMUST00000041342 Ercc6F8VPZ5 1481 aa21■□□□□ 0.95
Cacna1b-201ENSMUST00000041342 Fmn1Q05860 1466 aa20.99■□□□□ 0.95
Cacna1b-201ENSMUST00000041342 Setd5Q5XJV7 1441 aa20.96■□□□□ 0.95
Cacna1b-201ENSMUST00000041342 BlmO88700 1416 aa20.91■□□□□ 0.94
Cacna1b-201ENSMUST00000041342 NrdcQ8BHG1 1161 aa20.9■□□□□ 0.94
Cacna1b-201ENSMUST00000041342 Pds5bQ4VA53 1446 aaKnown RBP20.9■□□□□ 0.94
Cacna1b-201ENSMUST00000041342 Ccdc18Q640L5 1455 aa20.87■□□□□ 0.93
Cacna1b-201ENSMUST00000041342 Cep162Q6ZQ06 1403 aa20.85■□□□□ 0.93
Cacna1b-201ENSMUST00000041342 Eea1Q8BL66 1411 aa20.85■□□□□ 0.93
Cacna1b-201ENSMUST00000041342 Smarca4Q3TKT4 1613 aaKnown RBP20.84■□□□□ 0.93
Cacna1b-201ENSMUST00000041342 Cttnbp2B9EJA2 1648 aa20.83■□□□□ 0.93
Cacna1b-201ENSMUST00000041342 Mapk8ip2Q9ERE9 830 aa20.79■□□□□ 0.92
Cacna1b-201ENSMUST00000041342 Ccer2J3QPU5 274 aa20.78■□□□□ 0.92
Cacna1b-201ENSMUST00000041342 Eif5bQ05D44 1216 aaKnown RBP20.77■□□□□ 0.92
Cacna1b-201ENSMUST00000041342 Anks4bQ8K3X6 423 aa20.75■□□□□ 0.91
Cacna1b-201ENSMUST00000041342 Aebp2Q9Z248 504 aaKnown RBP20.73■□□□□ 0.91
Cacna1b-201ENSMUST00000041342 Anp32bQ9EST5 272 aaKnown RBP20.73■□□□□ 0.91
Cacna1b-201ENSMUST00000041342 Zbtb7cQ8VCZ7 619 aa20.68■□□□□ 0.9
Cacna1b-201ENSMUST00000041342 Chic2Q9D9G3 165 aa20.67■□□□□ 0.9
Cacna1b-201ENSMUST00000041342 Atad2bE9Q166 1460 aaKnown RBP20.65■□□□□ 0.9
Cacna1b-201ENSMUST00000041342 Rapgef2Q8CHG7 1496 aa20.63■□□□□ 0.89
Cacna1b-201ENSMUST00000041342 Os9Q8K2C7 672 aa20.61■□□□□ 0.89
Cacna1b-201ENSMUST00000041342 Csrnp3P59055 597 aa20.58■□□□□ 0.89
Cacna1b-201ENSMUST00000041342 Iqgap2Q3UQ44 1575 aa20.56■□□□□ 0.88
Cacna1b-201ENSMUST00000041342 Cc2d2aQ8CFW7 1633 aa20.55■□□□□ 0.88
Cacna1b-201ENSMUST00000041342 Fkbp15Q6P9Q6 1216 aaKnown RBP20.55■□□□□ 0.88
Cacna1b-201ENSMUST00000041342 Hnrnpul2Q00PI9 745 aaKnown RBP20.52■□□□□ 0.87
Cacna1b-201ENSMUST00000041342 NeflP08551 543 aa20.45■□□□□ 0.86
Cacna1b-201ENSMUST00000041342 Ifnlr1Q8CGK5 535 aa20.43■□□□□ 0.86
Cacna1b-201ENSMUST00000041342 Myt1Q8CFC2 1127 aa20.42■□□□□ 0.86
Cacna1b-201ENSMUST00000041342 Gm38655A0A286YDK6 273 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms