RNA–Protein interactions for RNA: ENSMUST00000039782.13

Chd6-201, Transcript of Chromodomain-helicase-DNA-binding protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd6, Length 10,515 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6-201ENSMUST00000039782 Rhox8Q6VSS7 320 aa10.61□□□□□ -0.71
Chd6-201ENSMUST00000039782 Rpgrip1Q9EPQ2 1331 aa10.55□□□□□ -0.72
Chd6-201ENSMUST00000039782 Las1lA2BE28 776 aaKnown RBP10.3□□□□□ -0.76
Chd6-201ENSMUST00000039782 Ehmt2Q9Z148 1263 aaKnown RBP10.2□□□□□ -0.78
Chd6-201ENSMUST00000039782 Cngb1E1AZ71 1325 aa10.14□□□□□ -0.79
Chd6-201ENSMUST00000039782 Pelp1Q9DBD5 1123 aaKnown RBP9.89□□□□□ -0.83
Chd6-201ENSMUST00000039782 Zeb1Q64318 1117 aa9.86□□□□□ -0.83
Chd6-201ENSMUST00000039782 Wdr66E9Q743 1299 aa9.85□□□□□ -0.83
Chd6-201ENSMUST00000039782 CenpbP27790 599 aa9.77□□□□□ -0.84
Chd6-201ENSMUST00000039782 Amer1Q7TS75 1132 aa9.73□□□□□ -0.85
Chd6-201ENSMUST00000039782 Acin1Q9JIX8 1338 aaKnown RBP9.73□□□□□ -0.85
Chd6-201ENSMUST00000039782 Rtl1Q7M732 1744 aa9.72□□□□□ -0.85
Chd6-201ENSMUST00000039782 Myt1Q8CFC2 1127 aa9.6□□□□□ -0.87
Chd6-201ENSMUST00000039782 Ccdc180J3QNE4 1664 aa9.59□□□□□ -0.87
Chd6-201ENSMUST00000039782 Pcgf6Q99NA9 353 aa9.55□□□□□ -0.88
Chd6-201ENSMUST00000039782 Ttbk1Q6PCN3 1308 aa9.53□□□□□ -0.88
Chd6-201ENSMUST00000039782 Ccdc136Q3TVA9 1136 aa9.43□□□□□ -0.9
Chd6-201ENSMUST00000039782 DiexfQ8BTT6 772 aaKnown RBP9.43□□□□□ -0.9
Chd6-201ENSMUST00000039782 NefmP08553 848 aa9.38□□□□□ -0.91
Chd6-201ENSMUST00000039782 Gab3Q8BSM5 595 aa9.36□□□□□ -0.91
Chd6-201ENSMUST00000039782 Cdk11bP24788 784 aaKnown RBP9.33□□□□□ -0.92
Chd6-201ENSMUST00000039782 Supt5hO55201 1082 aaKnown RBP9.32□□□□□ -0.92
Chd6-201ENSMUST00000039782 Ube2uB1AUC4 352 aa9.31□□□□□ -0.92
Chd6-201ENSMUST00000039782 Stra8P70278 393 aa9.3□□□□□ -0.92
Chd6-201ENSMUST00000039782 Slc24a1Q91WD8 1130 aa9.28□□□□□ -0.92
Chd6-201ENSMUST00000039782 4933416C03RikQ3V063 378 aa9.26□□□□□ -0.93
Chd6-201ENSMUST00000039782 Trim41Q5NCC3 630 aa9.25□□□□□ -0.93
Chd6-201ENSMUST00000039782 NischQ80TM9 1593 aa9.23□□□□□ -0.93
Chd6-201ENSMUST00000039782 Nop58Q6DFW4 536 aaKnown RBP9.22□□□□□ -0.93
Chd6-201ENSMUST00000039782 4930567H17RikQ3V0K5 233 aa9.2□□□□□ -0.94
Chd6-201ENSMUST00000039782 UbtfP25976 765 aaKnown RBP9.19□□□□□ -0.94
Chd6-201ENSMUST00000039782 Tnnt3Q9QZ47 272 aa9.18□□□□□ -0.94
Chd6-201ENSMUST00000039782 Esf1Q3V1V3 845 aaKnown RBP9.16□□□□□ -0.94
Chd6-201ENSMUST00000039782 Myt1lP97500 1187 aa9.15□□□□□ -0.94
Chd6-201ENSMUST00000039782 Ppargc1bQ8VHJ7 1014 aa9.12□□□□□ -0.95
Chd6-201ENSMUST00000039782 Rtl5Q5DTT4 599 aa9.11□□□□□ -0.95
Chd6-201ENSMUST00000039782 Neurod1Q60867 357 aa9.11□□□□□ -0.95
Chd6-201ENSMUST00000039782 HrcG5E8J6 738 aa9.1□□□□□ -0.95
Chd6-201ENSMUST00000039782 Npm2Q80W85 207 aa9.1□□□□□ -0.95
Chd6-201ENSMUST00000039782 Csrnp3P59055 597 aa9.06□□□□□ -0.96
Chd6-201ENSMUST00000039782 Gm38655A0A286YDK6 273 aa9.05□□□□□ -0.96
Chd6-201ENSMUST00000039782 Eif5bQ05D44 1216 aaKnown RBP9.04□□□□□ -0.96
Chd6-201ENSMUST00000039782 Anp32aO35381 247 aa8.97□□□□□ -0.97
Chd6-201ENSMUST00000039782 NeflP08551 543 aa8.97□□□□□ -0.97
Chd6-201ENSMUST00000039782 NrdcQ8BHG1 1161 aa8.95□□□□□ -0.98
Chd6-201ENSMUST00000039782 Anks4bQ8K3X6 423 aa8.95□□□□□ -0.98
Chd6-201ENSMUST00000039782 Aplp2Q06335 707 aa8.92□□□□□ -0.98
Chd6-201ENSMUST00000039782 DaxxO35613 739 aa8.92□□□□□ -0.98
Chd6-201ENSMUST00000039782 TonslQ6NZL6 1363 aa8.92□□□□□ -0.98
Chd6-201ENSMUST00000039782 NclP09405 707 aaKnown RBP8.91□□□□□ -0.98
Chd6-201ENSMUST00000039782 Mier1Q5UAK0 511 aa8.9□□□□□ -0.99
Chd6-201ENSMUST00000039782 ClspnQ80YR7 1315 aa8.9□□□□□ -0.99
Chd6-201ENSMUST00000039782 Bcl11aQ9QYE3 773 aa8.83□□□□□ -1
Chd6-201ENSMUST00000039782 1700123L14RikQ3V2K7 440 aa8.82□□□□□ -1
Chd6-201ENSMUST00000039782 Sall2Q9QX96 1004 aa8.8□□□□□ -1
Chd6-201ENSMUST00000039782 Dcaf1Q80TR8 1506 aa8.78□□□□□ -1
Chd6-201ENSMUST00000039782 Fam50aQ9WV03 339 aaKnown RBP8.78□□□□□ -1
Chd6-201ENSMUST00000039782 Anp32bQ9EST5 272 aaKnown RBP8.76□□□□□ -1.01
Chd6-201ENSMUST00000039782 Mapk8ip2Q9ERE9 830 aa8.73□□□□□ -1.01
Chd6-201ENSMUST00000039782 Fam71e1A1L3C1 212 aa8.72□□□□□ -1.01
Chd6-201ENSMUST00000039782 Ap3b1Q9Z1T1 1105 aa8.71□□□□□ -1.02
Chd6-201ENSMUST00000039782 Calr4Q3TQS0 420 aa8.68□□□□□ -1.02
Chd6-201ENSMUST00000039782 Ythdc1E9Q5K9 736 aaKnown RBP8.67□□□□□ -1.02
Chd6-201ENSMUST00000039782 Ppp4r2Q0VGB7 417 aa8.66□□□□□ -1.02
Chd6-201ENSMUST00000039782 ArxO35085 564 aa8.65□□□□□ -1.02
Chd6-201ENSMUST00000039782 Hsp90aa1P07901 733 aaKnown RBP8.65□□□□□ -1.02
Chd6-201ENSMUST00000039782 Ccdc9Q8VC31 543 aaKnown RBP8.65□□□□□ -1.03
Chd6-201ENSMUST00000039782 Zcchc6Q5BLK4 1491 aaKnown RBP8.57□□□□□ -1.04
Chd6-201ENSMUST00000039782 Wdr43Q6ZQL4 677 aaKnown RBP8.57□□□□□ -1.04
Chd6-201ENSMUST00000039782 CatipB9EKE5 520 aa8.56□□□□□ -1.04
Chd6-201ENSMUST00000039782 Lmod3E9QA62 571 aa8.56□□□□□ -1.04
Chd6-201ENSMUST00000039782 Plekhg3Q4VAC9 1341 aa8.54□□□□□ -1.04
Chd6-201ENSMUST00000039782 Abcc9P70170 1546 aa8.53□□□□□ -1.04
Chd6-201ENSMUST00000039782 Il27Q8K3I6 234 aa8.52□□□□□ -1.05
Chd6-201ENSMUST00000039782 Os9Q8K2C7 672 aa8.52□□□□□ -1.05
Chd6-201ENSMUST00000039782 Eid3Q3V124 375 aa8.52□□□□□ -1.05
Chd6-201ENSMUST00000039782 Ccdc27Q3V036 639 aa8.51□□□□□ -1.05
Chd6-201ENSMUST00000039782 Irx3P81067 507 aa8.48□□□□□ -1.05
Chd6-201ENSMUST00000039782 Upf2A2AT37 1269 aaKnown RBP8.48□□□□□ -1.05
Chd6-201ENSMUST00000039782 DekQ7TNV0 380 aaKnown RBP8.47□□□□□ -1.05
Chd6-201ENSMUST00000039782 Cep164Q5DU05 1446 aa8.45□□□□□ -1.06
Chd6-201ENSMUST00000039782 Aebp2Q9Z248 504 aaKnown RBP8.45□□□□□ -1.06
Chd6-201ENSMUST00000039782 Polr3glQ8R0C0 218 aa8.45□□□□□ -1.06
Chd6-201ENSMUST00000039782 SafbD3YXK2 937 aaKnown RBP8.45□□□□□ -1.06
Chd6-201ENSMUST00000039782 Zbtb7cQ8VCZ7 619 aa8.45□□□□□ -1.06
Chd6-201ENSMUST00000039782 Vsig10D3YX43 558 aa8.44□□□□□ -1.06
Chd6-201ENSMUST00000039782 CanxP35564 591 aaKnown RBP8.44□□□□□ -1.06
Chd6-201ENSMUST00000039782 Hnrnpul2Q00PI9 745 aaKnown RBP8.43□□□□□ -1.06
Chd6-201ENSMUST00000039782 Nlrp6Q91WS2 869 aa8.42□□□□□ -1.06
Chd6-201ENSMUST00000039782 Zbtb4Q5F293 982 aa8.42□□□□□ -1.06
Chd6-201ENSMUST00000039782 Trim44Q9QXA7 346 aa8.41□□□□□ -1.06
Chd6-201ENSMUST00000039782 Lmod2Q3UHZ5 550 aa8.38□□□□□ -1.07
Chd6-201ENSMUST00000039782 Hsp90ab1P11499 724 aaKnown RBP8.37□□□□□ -1.07
Chd6-201ENSMUST00000039782 Mrs2Q5NCE8 434 aa8.36□□□□□ -1.07
Chd6-201ENSMUST00000039782 PrkcshO08795 521 aa8.36□□□□□ -1.07
Chd6-201ENSMUST00000039782 Rad21Q61550 635 aaKnown RBP8.36□□□□□ -1.07
Chd6-201ENSMUST00000039782 Pknox2Q8BG99 474 aa8.36□□□□□ -1.07
Chd6-201ENSMUST00000039782 Taok2Q6ZQ29 1240 aa8.35□□□□□ -1.07
Chd6-201ENSMUST00000039782 P3h3Q8CG70 732 aa8.35□□□□□ -1.07
Chd6-201ENSMUST00000039782 Clip1Q922J3 1391 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms