RNA–Protein interactions for RNA: ENSMUST00000039021.10

Ssx2ip-201, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 3,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-201ENSMUST00000039021 NischQ80TM9 1593 aa33.94■■■■□ 3.02
Ssx2ip-201ENSMUST00000039021 Rhox8Q6VSS7 320 aa33.17■■■□□ 2.9
Ssx2ip-201ENSMUST00000039021 Abcc9P70170 1546 aa32.74■■■□□ 2.83
Ssx2ip-201ENSMUST00000039021 Gm35339A0A140LHH9 1649 aa32.52■■■□□ 2.8
Ssx2ip-201ENSMUST00000039021 Abcc8B2RUS7 1588 aa32■■■□□ 2.71
Ssx2ip-201ENSMUST00000039021 Rtl1Q7M732 1744 aa31.22■■■□□ 2.59
Ssx2ip-201ENSMUST00000039021 Ehmt2Q9Z148 1263 aaKnown RBP31.12■■■□□ 2.57
Ssx2ip-201ENSMUST00000039021 Ccdc180J3QNE4 1664 aa31.11■■■□□ 2.57
Ssx2ip-201ENSMUST00000039021 Ccdc136Q3TVA9 1136 aa30.74■■■□□ 2.51
Ssx2ip-201ENSMUST00000039021 Rpgrip1Q9EPQ2 1331 aa30.53■■■□□ 2.48
Ssx2ip-201ENSMUST00000039021 Zcchc6Q5BLK4 1491 aaKnown RBP30.42■■■□□ 2.46
Ssx2ip-201ENSMUST00000039021 Acin1Q9JIX8 1338 aaKnown RBP30.27■■■□□ 2.44
Ssx2ip-201ENSMUST00000039021 HrcG5E8J6 738 aa29.93■■■□□ 2.38
Ssx2ip-201ENSMUST00000039021 Trim41Q5NCC3 630 aa29.91■■■□□ 2.38
Ssx2ip-201ENSMUST00000039021 Rb1cc1Q9ESK9 1588 aa29.79■■■□□ 2.36
Ssx2ip-201ENSMUST00000039021 ScribQ80U72 1612 aa29.73■■■□□ 2.35
Ssx2ip-201ENSMUST00000039021 Dcaf1Q80TR8 1506 aa29.68■■■□□ 2.34
Ssx2ip-201ENSMUST00000039021 Pcgf6Q99NA9 353 aa29.55■■■□□ 2.32
Ssx2ip-201ENSMUST00000039021 Gab3Q8BSM5 595 aa29.39■■■□□ 2.3
Ssx2ip-201ENSMUST00000039021 Kdm5dQ62240 1548 aa29.35■■■□□ 2.29
Ssx2ip-201ENSMUST00000039021 Cngb1E1AZ71 1325 aa29.31■■■□□ 2.28
Ssx2ip-201ENSMUST00000039021 Baz1aO88379 1555 aa29.27■■■□□ 2.28
Ssx2ip-201ENSMUST00000039021 Supt5hO55201 1082 aaKnown RBP29.14■■■□□ 2.26
Ssx2ip-201ENSMUST00000039021 Zeb1Q64318 1117 aa29.01■■■□□ 2.23
Ssx2ip-201ENSMUST00000039021 Chic1Q8CBW7 227 aa29■■■□□ 2.23
Ssx2ip-201ENSMUST00000039021 NacadQ5SWP3 1504 aa28.93■■■□□ 2.22
Ssx2ip-201ENSMUST00000039021 Cep164Q5DU05 1446 aa28.88■■■□□ 2.21
Ssx2ip-201ENSMUST00000039021 Rsf1E9PWW9 1441 aaKnown RBP28.64■■■□□ 2.18
Ssx2ip-201ENSMUST00000039021 Esf1Q3V1V3 845 aaKnown RBP28.63■■■□□ 2.17
Ssx2ip-201ENSMUST00000039021 Smarca2Q6DIC0 1577 aa28.59■■■□□ 2.17
Ssx2ip-201ENSMUST00000039021 Mier1Q5UAK0 511 aa28.55■■■□□ 2.16
Ssx2ip-201ENSMUST00000039021 Neurod1Q60867 357 aa28.45■■■□□ 2.14
Ssx2ip-201ENSMUST00000039021 Ccdc88bQ4QRL3 1481 aa28.42■■■□□ 2.14
Ssx2ip-201ENSMUST00000039021 UbtfP25976 765 aaKnown RBP28.34■■■□□ 2.13
Ssx2ip-201ENSMUST00000039021 Cecr2E9Q2Z1 1453 aa28.3■■■□□ 2.12
Ssx2ip-201ENSMUST00000039021 Sycp2Q9CUU3 1500 aa28.29■■■□□ 2.12
Ssx2ip-201ENSMUST00000039021 Crybg2B7ZCC2 1516 aa28.26■■■□□ 2.12
Ssx2ip-201ENSMUST00000039021 Sall2Q9QX96 1004 aa28.24■■■□□ 2.11
Ssx2ip-201ENSMUST00000039021 NefmP08553 848 aa28.24■■■□□ 2.11
Ssx2ip-201ENSMUST00000039021 Brd4Q9ESU6 1400 aaKnown RBP28.22■■■□□ 2.11
Ssx2ip-201ENSMUST00000039021 Ppargc1bQ8VHJ7 1014 aa28.22■■■□□ 2.11
Ssx2ip-201ENSMUST00000039021 Myt1lP97500 1187 aa28.2■■■□□ 2.1
Ssx2ip-201ENSMUST00000039021 Wdr66E9Q743 1299 aa28.18■■■□□ 2.1
Ssx2ip-201ENSMUST00000039021 Golga3P55937 1487 aa28.11■■■□□ 2.09
Ssx2ip-201ENSMUST00000039021 Synj1Q8CHC4 1574 aa27.97■■■□□ 2.07
Ssx2ip-201ENSMUST00000039021 Aebp2Q9Z248 504 aaKnown RBP27.86■■■□□ 2.05
Ssx2ip-201ENSMUST00000039021 Las1lA2BE28 776 aaKnown RBP27.85■■■□□ 2.05
Ssx2ip-201ENSMUST00000039021 Npm2Q80W85 207 aa27.82■■■□□ 2.04
Ssx2ip-201ENSMUST00000039021 CftrP26361 1476 aa27.7■■■□□ 2.03
Ssx2ip-201ENSMUST00000039021 BicraF8VPZ9 1578 aa27.7■■■□□ 2.02
Ssx2ip-201ENSMUST00000039021 Plekhg3Q4VAC9 1341 aa27.67■■■□□ 2.02
Ssx2ip-201ENSMUST00000039021 Csrnp3P59055 597 aa27.62■■■□□ 2.01
Ssx2ip-201ENSMUST00000039021 Nop58Q6DFW4 536 aaKnown RBP27.47■■□□□ 1.99
Ssx2ip-201ENSMUST00000039021 Ap3b1Q9Z1T1 1105 aa27.47■■□□□ 1.99
Ssx2ip-201ENSMUST00000039021 Cc2d2aQ8CFW7 1633 aa27.46■■□□□ 1.99
Ssx2ip-201ENSMUST00000039021 Cdk11bP24788 784 aaKnown RBP27.44■■□□□ 1.98
Ssx2ip-201ENSMUST00000039021 Anks4bQ8K3X6 423 aa27.4■■□□□ 1.98
Ssx2ip-201ENSMUST00000039021 Gm38655A0A286YDK6 273 aa27.39■■□□□ 1.98
Ssx2ip-201ENSMUST00000039021 1700123L14RikQ3V2K7 440 aa27.39■■□□□ 1.98
Ssx2ip-201ENSMUST00000039021 TonslQ6NZL6 1363 aa27.39■■□□□ 1.97
Ssx2ip-201ENSMUST00000039021 Il27Q8K3I6 234 aa27.38■■□□□ 1.97
Ssx2ip-201ENSMUST00000039021 ClspnQ80YR7 1315 aa27.35■■□□□ 1.97
Ssx2ip-201ENSMUST00000039021 Top2bQ64511 1612 aa27.34■■□□□ 1.97
Ssx2ip-201ENSMUST00000039021 Rapgef2Q8CHG7 1496 aa27.33■■□□□ 1.97
Ssx2ip-201ENSMUST00000039021 Eid3Q3V124 375 aa27.32■■□□□ 1.96
Ssx2ip-201ENSMUST00000039021 Cep162Q6ZQ06 1403 aa27.31■■□□□ 1.96
Ssx2ip-201ENSMUST00000039021 Cttnbp2B9EJA2 1648 aa27.3■■□□□ 1.96
Ssx2ip-201ENSMUST00000039021 Clip1Q922J3 1391 aa27.29■■□□□ 1.96
Ssx2ip-201ENSMUST00000039021 Smarca4Q3TKT4 1613 aaKnown RBP27.17■■□□□ 1.94
Ssx2ip-201ENSMUST00000039021 Fmn1Q05860 1466 aa27.15■■□□□ 1.94
Ssx2ip-201ENSMUST00000039021 Mapk8ip2Q9ERE9 830 aa27.13■■□□□ 1.93
Ssx2ip-201ENSMUST00000039021 Top2aQ01320 1528 aaKnown RBP27.04■■□□□ 1.92
Ssx2ip-201ENSMUST00000039021 Iqgap2Q3UQ44 1575 aa26.87■■□□□ 1.89
Ssx2ip-201ENSMUST00000039021 Fam50aQ9WV03 339 aaKnown RBP26.86■■□□□ 1.89
Ssx2ip-201ENSMUST00000039021 Lmod2Q3UHZ5 550 aa26.83■■□□□ 1.88
Ssx2ip-201ENSMUST00000039021 CenpbP27790 599 aa26.74■■□□□ 1.87
Ssx2ip-201ENSMUST00000039021 Setd5Q5XJV7 1441 aa26.73■■□□□ 1.87
Ssx2ip-201ENSMUST00000039021 PtprkP35822 1457 aa26.72■■□□□ 1.87
Ssx2ip-201ENSMUST00000039021 Ncapd3Q6ZQK0 1506 aa26.72■■□□□ 1.87
Ssx2ip-201ENSMUST00000039021 Aplp2Q06335 707 aa26.7■■□□□ 1.87
Ssx2ip-201ENSMUST00000039021 Eea1Q8BL66 1411 aa26.66■■□□□ 1.86
Ssx2ip-201ENSMUST00000039021 SafbD3YXK2 937 aaKnown RBP26.65■■□□□ 1.86
Ssx2ip-201ENSMUST00000039021 NclP09405 707 aaKnown RBP26.64■■□□□ 1.86
Ssx2ip-201ENSMUST00000039021 Hnrnpul2Q00PI9 745 aaKnown RBP26.63■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 Arhgap35Q91YM2 1499 aa26.62■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 Arap1Q4LDD4 1452 aa26.61■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 Kif15Q6P9L6 1387 aa26.58■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 Atad2bE9Q166 1460 aaKnown RBP26.58■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 BlmO88700 1416 aa26.58■■□□□ 1.85
Ssx2ip-201ENSMUST00000039021 Ube2uB1AUC4 352 aa26.56■■□□□ 1.84
Ssx2ip-201ENSMUST00000039021 Slc24a1Q91WD8 1130 aa26.51■■□□□ 1.83
Ssx2ip-201ENSMUST00000039021 Eif4g1Q6NZJ6 1600 aaKnown RBP26.41■■□□□ 1.82
Ssx2ip-201ENSMUST00000039021 Pds5bQ4VA53 1446 aaKnown RBP26.4■■□□□ 1.82
Ssx2ip-201ENSMUST00000039021 Frmpd1A2AKB4 1549 aa26.36■■□□□ 1.81
Ssx2ip-201ENSMUST00000039021 Hspa5P20029 655 aaKnown RBP26.35■■□□□ 1.81
Ssx2ip-201ENSMUST00000039021 AqrQ8CFQ3 1481 aaKnown RBP26.33■■□□□ 1.81
Ssx2ip-201ENSMUST00000039021 Arhgef5E9Q7D5 1581 aa26.32■■□□□ 1.8
Ssx2ip-201ENSMUST00000039021 Baz1bQ9Z277 1479 aa26.29■■□□□ 1.8
Ssx2ip-201ENSMUST00000039021 Ccdc18Q640L5 1455 aa26.28■■□□□ 1.8
Ssx2ip-201ENSMUST00000039021 Fam71e1A1L3C1 212 aa26.26■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms