RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 NischQ80TM9 1593 aa31.11■■■□□ 2.57
Lsm1-201ENSMUST00000038421 Gm35339A0A140LHH9 1649 aa30.21■■■□□ 2.43
Lsm1-201ENSMUST00000038421 Abcc9P70170 1546 aa30.18■■■□□ 2.42
Lsm1-201ENSMUST00000038421 Rhox8Q6VSS7 320 aa29.52■■■□□ 2.32
Lsm1-201ENSMUST00000038421 Abcc8B2RUS7 1588 aa29.37■■■□□ 2.29
Lsm1-201ENSMUST00000038421 Rtl1Q7M732 1744 aa29.22■■■□□ 2.27
Lsm1-201ENSMUST00000038421 Ccdc180J3QNE4 1664 aa28.84■■■□□ 2.21
Lsm1-201ENSMUST00000038421 Rpgrip1Q9EPQ2 1331 aa28.16■■■□□ 2.1
Lsm1-201ENSMUST00000038421 Zcchc6Q5BLK4 1491 aaKnown RBP28.12■■■□□ 2.09
Lsm1-201ENSMUST00000038421 Acin1Q9JIX8 1338 aaKnown RBP27.64■■■□□ 2.01
Lsm1-201ENSMUST00000038421 Ehmt2Q9Z148 1263 aaKnown RBP27.51■■□□□ 1.99
Lsm1-201ENSMUST00000038421 HrcG5E8J6 738 aa27.43■■□□□ 1.98
Lsm1-201ENSMUST00000038421 Dcaf1Q80TR8 1506 aa27.36■■□□□ 1.97
Lsm1-201ENSMUST00000038421 Ccdc136Q3TVA9 1136 aa27.35■■□□□ 1.97
Lsm1-201ENSMUST00000038421 Rb1cc1Q9ESK9 1588 aa27.31■■□□□ 1.96
Lsm1-201ENSMUST00000038421 ScribQ80U72 1612 aa27.18■■□□□ 1.94
Lsm1-201ENSMUST00000038421 Baz1aO88379 1555 aa26.96■■□□□ 1.91
Lsm1-201ENSMUST00000038421 Trim41Q5NCC3 630 aa26.89■■□□□ 1.89
Lsm1-201ENSMUST00000038421 Pcgf6Q99NA9 353 aa26.83■■□□□ 1.88
Lsm1-201ENSMUST00000038421 Kdm5dQ62240 1548 aa26.8■■□□□ 1.88
Lsm1-201ENSMUST00000038421 Cep164Q5DU05 1446 aa26.5■■□□□ 1.83
Lsm1-201ENSMUST00000038421 NacadQ5SWP3 1504 aa26.45■■□□□ 1.83
Lsm1-201ENSMUST00000038421 Smarca2Q6DIC0 1577 aa26.39■■□□□ 1.82
Lsm1-201ENSMUST00000038421 Supt5hO55201 1082 aaKnown RBP26.3■■□□□ 1.8
Lsm1-201ENSMUST00000038421 Crybg2B7ZCC2 1516 aa26.24■■□□□ 1.79
Lsm1-201ENSMUST00000038421 Cngb1E1AZ71 1325 aa26.09■■□□□ 1.77
Lsm1-201ENSMUST00000038421 Chic1Q8CBW7 227 aa26.08■■□□□ 1.77
Lsm1-201ENSMUST00000038421 Gab3Q8BSM5 595 aa26.07■■□□□ 1.76
Lsm1-201ENSMUST00000038421 Rsf1E9PWW9 1441 aaKnown RBP26.06■■□□□ 1.76
Lsm1-201ENSMUST00000038421 Zeb1Q64318 1117 aa25.89■■□□□ 1.73
Lsm1-201ENSMUST00000038421 Sycp2Q9CUU3 1500 aa25.87■■□□□ 1.73
Lsm1-201ENSMUST00000038421 Ccdc88bQ4QRL3 1481 aa25.82■■□□□ 1.72
Lsm1-201ENSMUST00000038421 Brd4Q9ESU6 1400 aaKnown RBP25.81■■□□□ 1.72
Lsm1-201ENSMUST00000038421 Neurod1Q60867 357 aa25.79■■□□□ 1.72
Lsm1-201ENSMUST00000038421 Mier1Q5UAK0 511 aa25.75■■□□□ 1.71
Lsm1-201ENSMUST00000038421 NefmP08553 848 aa25.75■■□□□ 1.71
Lsm1-201ENSMUST00000038421 Cecr2E9Q2Z1 1453 aa25.73■■□□□ 1.71
Lsm1-201ENSMUST00000038421 Golga3P55937 1487 aa25.71■■□□□ 1.71
Lsm1-201ENSMUST00000038421 Synj1Q8CHC4 1574 aa25.59■■□□□ 1.69
Lsm1-201ENSMUST00000038421 Sall2Q9QX96 1004 aa25.51■■□□□ 1.67
Lsm1-201ENSMUST00000038421 Esf1Q3V1V3 845 aaKnown RBP25.47■■□□□ 1.67
Lsm1-201ENSMUST00000038421 CftrP26361 1476 aa25.35■■□□□ 1.65
Lsm1-201ENSMUST00000038421 Top2bQ64511 1612 aa25.33■■□□□ 1.64
Lsm1-201ENSMUST00000038421 BicraF8VPZ9 1578 aa25.28■■□□□ 1.64
Lsm1-201ENSMUST00000038421 UbtfP25976 765 aaKnown RBP25.28■■□□□ 1.64
Lsm1-201ENSMUST00000038421 Las1lA2BE28 776 aaKnown RBP25.21■■□□□ 1.63
Lsm1-201ENSMUST00000038421 Cc2d2aQ8CFW7 1633 aa25.17■■□□□ 1.62
Lsm1-201ENSMUST00000038421 Cttnbp2B9EJA2 1648 aa25.15■■□□□ 1.62
Lsm1-201ENSMUST00000038421 Wdr66E9Q743 1299 aa25.14■■□□□ 1.62
Lsm1-201ENSMUST00000038421 Aebp2Q9Z248 504 aaKnown RBP25.11■■□□□ 1.61
Lsm1-201ENSMUST00000038421 Rapgef2Q8CHG7 1496 aa25.09■■□□□ 1.61
Lsm1-201ENSMUST00000038421 Anks4bQ8K3X6 423 aa25.08■■□□□ 1.61
Lsm1-201ENSMUST00000038421 Myt1lP97500 1187 aa25■■□□□ 1.59
Lsm1-201ENSMUST00000038421 Csrnp3P59055 597 aa24.95■■□□□ 1.58
Lsm1-201ENSMUST00000038421 Fmn1Q05860 1466 aa24.92■■□□□ 1.58
Lsm1-201ENSMUST00000038421 Top2aQ01320 1528 aaKnown RBP24.91■■□□□ 1.58
Lsm1-201ENSMUST00000038421 Cep162Q6ZQ06 1403 aa24.91■■□□□ 1.58
Lsm1-201ENSMUST00000038421 1700123L14RikQ3V2K7 440 aa24.91■■□□□ 1.58
Lsm1-201ENSMUST00000038421 ClspnQ80YR7 1315 aa24.9■■□□□ 1.58
Lsm1-201ENSMUST00000038421 Ppargc1bQ8VHJ7 1014 aa24.89■■□□□ 1.58
Lsm1-201ENSMUST00000038421 Smarca4Q3TKT4 1613 aaKnown RBP24.88■■□□□ 1.57
Lsm1-201ENSMUST00000038421 Cdk11bP24788 784 aaKnown RBP24.85■■□□□ 1.57
Lsm1-201ENSMUST00000038421 Nop58Q6DFW4 536 aaKnown RBP24.83■■□□□ 1.57
Lsm1-201ENSMUST00000038421 Npm2Q80W85 207 aa24.78■■□□□ 1.56
Lsm1-201ENSMUST00000038421 TonslQ6NZL6 1363 aa24.77■■□□□ 1.56
Lsm1-201ENSMUST00000038421 Plekhg3Q4VAC9 1341 aa24.72■■□□□ 1.55
Lsm1-201ENSMUST00000038421 Clip1Q922J3 1391 aa24.68■■□□□ 1.54
Lsm1-201ENSMUST00000038421 Eif4g1Q6NZJ6 1600 aaKnown RBP24.56■■□□□ 1.52
Lsm1-201ENSMUST00000038421 Ncapd3Q6ZQK0 1506 aa24.55■■□□□ 1.52
Lsm1-201ENSMUST00000038421 Iqgap2Q3UQ44 1575 aa24.52■■□□□ 1.52
Lsm1-201ENSMUST00000038421 Aplp2Q06335 707 aa24.51■■□□□ 1.51
Lsm1-201ENSMUST00000038421 Gm38655A0A286YDK6 273 aa24.36■■□□□ 1.49
Lsm1-201ENSMUST00000038421 Arhgap35Q91YM2 1499 aa24.35■■□□□ 1.49
Lsm1-201ENSMUST00000038421 Eid3Q3V124 375 aa24.34■■□□□ 1.49
Lsm1-201ENSMUST00000038421 CenpbP27790 599 aa24.33■■□□□ 1.48
Lsm1-201ENSMUST00000038421 Ap3b1Q9Z1T1 1105 aa24.32■■□□□ 1.48
Lsm1-201ENSMUST00000038421 Arap1Q4LDD4 1452 aa24.3■■□□□ 1.48
Lsm1-201ENSMUST00000038421 TnnQ80Z71 1560 aa24.3■■□□□ 1.48
Lsm1-201ENSMUST00000038421 Eea1Q8BL66 1411 aa24.28■■□□□ 1.48
Lsm1-201ENSMUST00000038421 PtprkP35822 1457 aa24.28■■□□□ 1.48
Lsm1-201ENSMUST00000038421 Atad2bE9Q166 1460 aaKnown RBP24.21■■□□□ 1.47
Lsm1-201ENSMUST00000038421 Kdm5bQ80Y84 1544 aa24.2■■□□□ 1.47
Lsm1-201ENSMUST00000038421 NrkQ9R0G8 1455 aa24.19■■□□□ 1.46
Lsm1-201ENSMUST00000038421 Arhgef5E9Q7D5 1581 aa24.18■■□□□ 1.46
Lsm1-201ENSMUST00000038421 Setd5Q5XJV7 1441 aa24.18■■□□□ 1.46
Lsm1-201ENSMUST00000038421 Il27Q8K3I6 234 aa24.18■■□□□ 1.46
Lsm1-201ENSMUST00000038421 Ccdc18Q640L5 1455 aa24.14■■□□□ 1.45
Lsm1-201ENSMUST00000038421 Hnrnpul2Q00PI9 745 aaKnown RBP24.05■■□□□ 1.44
Lsm1-201ENSMUST00000038421 Shroom4Q1W617 1475 aa24.04■■□□□ 1.44
Lsm1-201ENSMUST00000038421 Myt1Q8CFC2 1127 aa24.03■■□□□ 1.44
Lsm1-201ENSMUST00000038421 Baz1bQ9Z277 1479 aa24.02■■□□□ 1.44
Lsm1-201ENSMUST00000038421 Tiam1Q60610 1591 aa24.02■■□□□ 1.44
Lsm1-201ENSMUST00000038421 Mapk8ip2Q9ERE9 830 aa24.01■■□□□ 1.43
Lsm1-201ENSMUST00000038421 Lamc3Q9R0B6 1581 aa23.99■■□□□ 1.43
Lsm1-201ENSMUST00000038421 Pds5bQ4VA53 1446 aaKnown RBP23.98■■□□□ 1.43
Lsm1-201ENSMUST00000038421 Map3k1P53349 1493 aa23.98■■□□□ 1.43
Lsm1-201ENSMUST00000038421 Frmpd1A2AKB4 1549 aa23.98■■□□□ 1.43
Lsm1-201ENSMUST00000038421 BlmO88700 1416 aa23.97■■□□□ 1.43
Lsm1-201ENSMUST00000038421 Kif15Q6P9L6 1387 aa23.97■■□□□ 1.43
Lsm1-201ENSMUST00000038421 TchhA0A0B4J1F9 1599 aa23.97■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms