RNA–Protein interactions for RNA: ENSMUST00000035667.8

Trim62-201, Transcript of E3 ubiquitin-protein ligase TRIM62, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim62, Length 3,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62-201ENSMUST00000035667 Rhox8Q6VSS7 320 aa26.62■■□□□ 1.85
Trim62-201ENSMUST00000035667 Ehmt2Q9Z148 1263 aaKnown RBP25.77■■□□□ 1.72
Trim62-201ENSMUST00000035667 Rpgrip1Q9EPQ2 1331 aa25.68■■□□□ 1.7
Trim62-201ENSMUST00000035667 NischQ80TM9 1593 aa25.22■■□□□ 1.63
Trim62-201ENSMUST00000035667 Acin1Q9JIX8 1338 aaKnown RBP24.91■■□□□ 1.58
Trim62-201ENSMUST00000035667 Pcgf6Q99NA9 353 aa24.71■■□□□ 1.55
Trim62-201ENSMUST00000035667 Ccdc136Q3TVA9 1136 aa24.38■■□□□ 1.49
Trim62-201ENSMUST00000035667 Ccdc180J3QNE4 1664 aa24.3■■□□□ 1.48
Trim62-201ENSMUST00000035667 Zeb1Q64318 1117 aa24.26■■□□□ 1.47
Trim62-201ENSMUST00000035667 Supt5hO55201 1082 aaKnown RBP24.18■■□□□ 1.46
Trim62-201ENSMUST00000035667 Abcc9P70170 1546 aa24.05■■□□□ 1.44
Trim62-201ENSMUST00000035667 Rtl1Q7M732 1744 aa24.02■■□□□ 1.44
Trim62-201ENSMUST00000035667 Las1lA2BE28 776 aaKnown RBP23.96■■□□□ 1.43
Trim62-201ENSMUST00000035667 Trim41Q5NCC3 630 aa23.91■■□□□ 1.42
Trim62-201ENSMUST00000035667 Neurod1Q60867 357 aa23.81■■□□□ 1.4
Trim62-201ENSMUST00000035667 HrcG5E8J6 738 aa23.72■■□□□ 1.39
Trim62-201ENSMUST00000035667 Gab3Q8BSM5 595 aa23.71■■□□□ 1.39
Trim62-201ENSMUST00000035667 Cngb1E1AZ71 1325 aa23.69■■□□□ 1.38
Trim62-201ENSMUST00000035667 Wdr66E9Q743 1299 aa23.67■■□□□ 1.38
Trim62-201ENSMUST00000035667 Ppargc1bQ8VHJ7 1014 aa23.4■■□□□ 1.34
Trim62-201ENSMUST00000035667 Abcc8B2RUS7 1588 aa23.38■■□□□ 1.33
Trim62-201ENSMUST00000035667 Dcaf1Q80TR8 1506 aa23.32■■□□□ 1.32
Trim62-201ENSMUST00000035667 Csrnp3P59055 597 aa23.25■■□□□ 1.31
Trim62-201ENSMUST00000035667 NefmP08553 848 aa23.24■■□□□ 1.31
Trim62-201ENSMUST00000035667 Sall2Q9QX96 1004 aa23.21■■□□□ 1.31
Trim62-201ENSMUST00000035667 Gm38655A0A286YDK6 273 aa23.15■■□□□ 1.3
Trim62-201ENSMUST00000035667 CenpbP27790 599 aa23.14■■□□□ 1.29
Trim62-201ENSMUST00000035667 1700123L14RikQ3V2K7 440 aa23.11■■□□□ 1.29
Trim62-201ENSMUST00000035667 Mier1Q5UAK0 511 aa23.1■■□□□ 1.29
Trim62-201ENSMUST00000035667 UbtfP25976 765 aaKnown RBP23.06■■□□□ 1.28
Trim62-201ENSMUST00000035667 Zcchc6Q5BLK4 1491 aaKnown RBP23.06■■□□□ 1.28
Trim62-201ENSMUST00000035667 Cdk11bP24788 784 aaKnown RBP23.04■■□□□ 1.28
Trim62-201ENSMUST00000035667 Nop58Q6DFW4 536 aaKnown RBP22.97■■□□□ 1.27
Trim62-201ENSMUST00000035667 Gm35339A0A140LHH9 1649 aa22.95■■□□□ 1.27
Trim62-201ENSMUST00000035667 Anks4bQ8K3X6 423 aa22.89■■□□□ 1.25
Trim62-201ENSMUST00000035667 Myt1lP97500 1187 aa22.73■■□□□ 1.23
Trim62-201ENSMUST00000035667 Esf1Q3V1V3 845 aaKnown RBP22.69■■□□□ 1.22
Trim62-201ENSMUST00000035667 Myt1Q8CFC2 1127 aa22.64■■□□□ 1.21
Trim62-201ENSMUST00000035667 Aebp2Q9Z248 504 aaKnown RBP22.62■■□□□ 1.21
Trim62-201ENSMUST00000035667 Chic1Q8CBW7 227 aa22.6■■□□□ 1.21
Trim62-201ENSMUST00000035667 DiexfQ8BTT6 772 aaKnown RBP22.55■■□□□ 1.2
Trim62-201ENSMUST00000035667 Aplp2Q06335 707 aa22.53■■□□□ 1.2
Trim62-201ENSMUST00000035667 Cep164Q5DU05 1446 aa22.48■■□□□ 1.19
Trim62-201ENSMUST00000035667 ClspnQ80YR7 1315 aa22.45■■□□□ 1.18
Trim62-201ENSMUST00000035667 Mapk8ip2Q9ERE9 830 aa22.39■■□□□ 1.17
Trim62-201ENSMUST00000035667 TonslQ6NZL6 1363 aa22.34■■□□□ 1.17
Trim62-201ENSMUST00000035667 Npm2Q80W85 207 aa22.31■■□□□ 1.16
Trim62-201ENSMUST00000035667 Slc24a1Q91WD8 1130 aa22.27■■□□□ 1.16
Trim62-201ENSMUST00000035667 Ap3b1Q9Z1T1 1105 aa22.24■■□□□ 1.15
Trim62-201ENSMUST00000035667 Fam71e1A1L3C1 212 aa22.2■■□□□ 1.14
Trim62-201ENSMUST00000035667 Ttbk1Q6PCN3 1308 aa22.18■■□□□ 1.14
Trim62-201ENSMUST00000035667 Rb1cc1Q9ESK9 1588 aa22.16■■□□□ 1.14
Trim62-201ENSMUST00000035667 SafbD3YXK2 937 aaKnown RBP22.16■■□□□ 1.14
Trim62-201ENSMUST00000035667 Eid3Q3V124 375 aa22.11■■□□□ 1.13
Trim62-201ENSMUST00000035667 Plekhg3Q4VAC9 1341 aa22.07■■□□□ 1.12
Trim62-201ENSMUST00000035667 Tnnt3Q9QZ47 272 aa22.06■■□□□ 1.12
Trim62-201ENSMUST00000035667 Bcl11aQ9QYE3 773 aa22.04■■□□□ 1.12
Trim62-201ENSMUST00000035667 Pelp1Q9DBD5 1123 aaKnown RBP22.04■■□□□ 1.12
Trim62-201ENSMUST00000035667 Rsf1E9PWW9 1441 aaKnown RBP22.01■■□□□ 1.11
Trim62-201ENSMUST00000035667 Hnrnpul2Q00PI9 745 aaKnown RBP22■■□□□ 1.11
Trim62-201ENSMUST00000035667 Ube2uB1AUC4 352 aa21.91■■□□□ 1.1
Trim62-201ENSMUST00000035667 NclP09405 707 aaKnown RBP21.87■■□□□ 1.09
Trim62-201ENSMUST00000035667 Eif5bQ05D44 1216 aaKnown RBP21.86■■□□□ 1.09
Trim62-201ENSMUST00000035667 Anp32aO35381 247 aa21.83■■□□□ 1.08
Trim62-201ENSMUST00000035667 Stra8P70278 393 aa21.82■■□□□ 1.08
Trim62-201ENSMUST00000035667 Fam50aQ9WV03 339 aaKnown RBP21.74■■□□□ 1.07
Trim62-201ENSMUST00000035667 Ccdc88bQ4QRL3 1481 aa21.72■■□□□ 1.07
Trim62-201ENSMUST00000035667 Baz1aO88379 1555 aa21.72■■□□□ 1.07
Trim62-201ENSMUST00000035667 Amer1Q7TS75 1132 aa21.72■■□□□ 1.07
Trim62-201ENSMUST00000035667 Ifnlr1Q8CGK5 535 aa21.61■■□□□ 1.05
Trim62-201ENSMUST00000035667 Calr4Q3TQS0 420 aa21.58■■□□□ 1.05
Trim62-201ENSMUST00000035667 Il27Q8K3I6 234 aa21.56■■□□□ 1.04
Trim62-201ENSMUST00000035667 PrkcshO08795 521 aa21.55■■□□□ 1.04
Trim62-201ENSMUST00000035667 Clip1Q922J3 1391 aa21.54■■□□□ 1.04
Trim62-201ENSMUST00000035667 Ppp4r2Q0VGB7 417 aa21.51■■□□□ 1.03
Trim62-201ENSMUST00000035667 Brd4Q9ESU6 1400 aaKnown RBP21.48■■□□□ 1.03
Trim62-201ENSMUST00000035667 Rtl5Q5DTT4 599 aa21.45■■□□□ 1.02
Trim62-201ENSMUST00000035667 Golga3P55937 1487 aa21.42■■□□□ 1.02
Trim62-201ENSMUST00000035667 Lmod2Q3UHZ5 550 aa21.39■■□□□ 1.01
Trim62-201ENSMUST00000035667 Kdm5dQ62240 1548 aa21.35■■□□□ 1.01
Trim62-201ENSMUST00000035667 Nolc1E9Q5C9 702 aaKnown RBP21.35■■□□□ 1.01
Trim62-201ENSMUST00000035667 4933416C03RikQ3V063 378 aa21.34■■□□□ 1.01
Trim62-201ENSMUST00000035667 P3h3Q8CG70 732 aa21.31■■□□□ 1
Trim62-201ENSMUST00000035667 NrdcQ8BHG1 1161 aa21.31■■□□□ 1
Trim62-201ENSMUST00000035667 Wdr43Q6ZQL4 677 aaKnown RBP21.27■■□□□ 1
Trim62-201ENSMUST00000035667 Supt16hQ920B9 1047 aa21.2■□□□□ 0.98
Trim62-201ENSMUST00000035667 ScribQ80U72 1612 aa21.12■□□□□ 0.97
Trim62-201ENSMUST00000035667 Slc4a3P16283 1227 aa21.12■□□□□ 0.97
Trim62-201ENSMUST00000035667 NacadQ5SWP3 1504 aa21.12■□□□□ 0.97
Trim62-201ENSMUST00000035667 DaxxO35613 739 aa21.11■□□□□ 0.97
Trim62-201ENSMUST00000035667 Mrs2Q5NCE8 434 aa21.1■□□□□ 0.97
Trim62-201ENSMUST00000035667 Smarca2Q6DIC0 1577 aa21.09■□□□□ 0.97
Trim62-201ENSMUST00000035667 Znf710Q3U288 666 aa21.05■□□□□ 0.96
Trim62-201ENSMUST00000035667 Sin3aQ60520 1274 aaKnown RBP21.03■□□□□ 0.96
Trim62-201ENSMUST00000035667 Cecr2E9Q2Z1 1453 aa21.03■□□□□ 0.96
Trim62-201ENSMUST00000035667 Cep162Q6ZQ06 1403 aa21.02■□□□□ 0.96
Trim62-201ENSMUST00000035667 Hspa5P20029 655 aaKnown RBP21.01■□□□□ 0.95
Trim62-201ENSMUST00000035667 BlmO88700 1416 aa20.94■□□□□ 0.94
Trim62-201ENSMUST00000035667 Setd5Q5XJV7 1441 aa20.9■□□□□ 0.94
Trim62-201ENSMUST00000035667 Rapgef2Q8CHG7 1496 aa20.89■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms