RNA–Protein interactions for RNA: ENSMUST00000034851.5

Chrna3-201, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chrna3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-201ENSMUST00000034851 Rhox8Q6VSS7 320 aa22.91■■□□□ 1.26
Chrna3-201ENSMUST00000034851 NischQ80TM9 1593 aa22.08■■□□□ 1.13
Chrna3-201ENSMUST00000034851 Abcc9P70170 1546 aa20.97■□□□□ 0.95
Chrna3-201ENSMUST00000034851 Ccdc136Q3TVA9 1136 aa20.83■□□□□ 0.92
Chrna3-201ENSMUST00000034851 Ehmt2Q9Z148 1263 aaKnown RBP20.69■□□□□ 0.9
Chrna3-201ENSMUST00000034851 Abcc8B2RUS7 1588 aa20.53■□□□□ 0.88
Chrna3-201ENSMUST00000034851 Rpgrip1Q9EPQ2 1331 aa20.47■□□□□ 0.87
Chrna3-201ENSMUST00000034851 Gm35339A0A140LHH9 1649 aa20.3■□□□□ 0.84
Chrna3-201ENSMUST00000034851 Ccdc180J3QNE4 1664 aa20.21■□□□□ 0.83
Chrna3-201ENSMUST00000034851 Cngb1E1AZ71 1325 aa20.2■□□□□ 0.82
Chrna3-201ENSMUST00000034851 Trim41Q5NCC3 630 aa20.2■□□□□ 0.82
Chrna3-201ENSMUST00000034851 Rtl1Q7M732 1744 aa20.17■□□□□ 0.82
Chrna3-201ENSMUST00000034851 Esf1Q3V1V3 845 aaKnown RBP20.06■□□□□ 0.8
Chrna3-201ENSMUST00000034851 Gab3Q8BSM5 595 aa20.04■□□□□ 0.8
Chrna3-201ENSMUST00000034851 HrcG5E8J6 738 aa19.83■□□□□ 0.76
Chrna3-201ENSMUST00000034851 Acin1Q9JIX8 1338 aaKnown RBP19.77■□□□□ 0.76
Chrna3-201ENSMUST00000034851 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Chrna3-201ENSMUST00000034851 Zeb1Q64318 1117 aa19.54■□□□□ 0.72
Chrna3-201ENSMUST00000034851 Myt1lP97500 1187 aa19.49■□□□□ 0.71
Chrna3-201ENSMUST00000034851 Npm2Q80W85 207 aa19.47■□□□□ 0.71
Chrna3-201ENSMUST00000034851 Rb1cc1Q9ESK9 1588 aa19.39■□□□□ 0.69
Chrna3-201ENSMUST00000034851 Wdr66E9Q743 1299 aa19.34■□□□□ 0.69
Chrna3-201ENSMUST00000034851 Las1lA2BE28 776 aaKnown RBP19.28■□□□□ 0.68
Chrna3-201ENSMUST00000034851 UbtfP25976 765 aaKnown RBP19.25■□□□□ 0.67
Chrna3-201ENSMUST00000034851 Dcaf1Q80TR8 1506 aa19.23■□□□□ 0.67
Chrna3-201ENSMUST00000034851 NefmP08553 848 aa19.11■□□□□ 0.65
Chrna3-201ENSMUST00000034851 Pcgf6Q99NA9 353 aa19.07■□□□□ 0.64
Chrna3-201ENSMUST00000034851 Il27Q8K3I6 234 aa19.04■□□□□ 0.64
Chrna3-201ENSMUST00000034851 NacadQ5SWP3 1504 aa19.01■□□□□ 0.63
Chrna3-201ENSMUST00000034851 Baz1aO88379 1555 aa19.01■□□□□ 0.63
Chrna3-201ENSMUST00000034851 Chic1Q8CBW7 227 aa18.98■□□□□ 0.63
Chrna3-201ENSMUST00000034851 Kdm5dQ62240 1548 aa18.94■□□□□ 0.62
Chrna3-201ENSMUST00000034851 Ube2uB1AUC4 352 aa18.92■□□□□ 0.62
Chrna3-201ENSMUST00000034851 Cep164Q5DU05 1446 aa18.91■□□□□ 0.62
Chrna3-201ENSMUST00000034851 Brd4Q9ESU6 1400 aaKnown RBP18.9■□□□□ 0.62
Chrna3-201ENSMUST00000034851 Supt5hO55201 1082 aaKnown RBP18.84■□□□□ 0.61
Chrna3-201ENSMUST00000034851 Mier1Q5UAK0 511 aa18.81■□□□□ 0.6
Chrna3-201ENSMUST00000034851 Ap3b1Q9Z1T1 1105 aa18.76■□□□□ 0.59
Chrna3-201ENSMUST00000034851 ScribQ80U72 1612 aa18.69■□□□□ 0.58
Chrna3-201ENSMUST00000034851 Ppargc1bQ8VHJ7 1014 aa18.65■□□□□ 0.58
Chrna3-201ENSMUST00000034851 Plekhg3Q4VAC9 1341 aa18.58■□□□□ 0.57
Chrna3-201ENSMUST00000034851 Fam50aQ9WV03 339 aaKnown RBP18.52■□□□□ 0.56
Chrna3-201ENSMUST00000034851 Rsf1E9PWW9 1441 aaKnown RBP18.51■□□□□ 0.55
Chrna3-201ENSMUST00000034851 Golga3P55937 1487 aa18.5■□□□□ 0.55
Chrna3-201ENSMUST00000034851 TonslQ6NZL6 1363 aa18.44■□□□□ 0.54
Chrna3-201ENSMUST00000034851 Cdk11bP24788 784 aaKnown RBP18.43■□□□□ 0.54
Chrna3-201ENSMUST00000034851 Nop58Q6DFW4 536 aaKnown RBP18.37■□□□□ 0.53
Chrna3-201ENSMUST00000034851 Sycp2Q9CUU3 1500 aa18.36■□□□□ 0.53
Chrna3-201ENSMUST00000034851 Clip1Q922J3 1391 aa18.35■□□□□ 0.53
Chrna3-201ENSMUST00000034851 Lmod2Q3UHZ5 550 aa18.34■□□□□ 0.53
Chrna3-201ENSMUST00000034851 Npm1Q61937 292 aaKnown RBP18.34■□□□□ 0.53
Chrna3-201ENSMUST00000034851 Ccdc88bQ4QRL3 1481 aa18.32■□□□□ 0.52
Chrna3-201ENSMUST00000034851 Sall2Q9QX96 1004 aa18.3■□□□□ 0.52
Chrna3-201ENSMUST00000034851 Smarca2Q6DIC0 1577 aa18.29■□□□□ 0.52
Chrna3-201ENSMUST00000034851 Crybg2B7ZCC2 1516 aa18.28■□□□□ 0.52
Chrna3-201ENSMUST00000034851 NclP09405 707 aaKnown RBP18.28■□□□□ 0.52
Chrna3-201ENSMUST00000034851 Slc24a1Q91WD8 1130 aa18.26■□□□□ 0.51
Chrna3-201ENSMUST00000034851 Cecr2E9Q2Z1 1453 aa18.24■□□□□ 0.51
Chrna3-201ENSMUST00000034851 Eid3Q3V124 375 aa18.24■□□□□ 0.51
Chrna3-201ENSMUST00000034851 ClspnQ80YR7 1315 aa18.17■□□□□ 0.5
Chrna3-201ENSMUST00000034851 Neurod1Q60867 357 aa18.17■□□□□ 0.5
Chrna3-201ENSMUST00000034851 CenpbP27790 599 aa18.14■□□□□ 0.5
Chrna3-201ENSMUST00000034851 Stra8P70278 393 aa18.12■□□□□ 0.49
Chrna3-201ENSMUST00000034851 CftrP26361 1476 aa18.07■□□□□ 0.48
Chrna3-201ENSMUST00000034851 Ubl4bQ9CQ84 188 aa18.06■□□□□ 0.48
Chrna3-201ENSMUST00000034851 Synj1Q8CHC4 1574 aa18.03■□□□□ 0.48
Chrna3-201ENSMUST00000034851 Mapk8ip2Q9ERE9 830 aa18.02■□□□□ 0.48
Chrna3-201ENSMUST00000034851 Kif15Q6P9L6 1387 aa18.02■□□□□ 0.47
Chrna3-201ENSMUST00000034851 Setd5Q5XJV7 1441 aa17.98■□□□□ 0.47
Chrna3-201ENSMUST00000034851 Aebp2Q9Z248 504 aaKnown RBP17.96■□□□□ 0.47
Chrna3-201ENSMUST00000034851 BlmO88700 1416 aa17.93■□□□□ 0.46
Chrna3-201ENSMUST00000034851 Fmn1Q05860 1466 aa17.91■□□□□ 0.46
Chrna3-201ENSMUST00000034851 Cep162Q6ZQ06 1403 aa17.89■□□□□ 0.45
Chrna3-201ENSMUST00000034851 Tnnt3Q9QZ47 272 aa17.86■□□□□ 0.45
Chrna3-201ENSMUST00000034851 Pelp1Q9DBD5 1123 aaKnown RBP17.84■□□□□ 0.45
Chrna3-201ENSMUST00000034851 Eea1Q8BL66 1411 aa17.84■□□□□ 0.45
Chrna3-201ENSMUST00000034851 NrdcQ8BHG1 1161 aa17.82■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Ercc6F8VPZ5 1481 aa17.81■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Eif5bQ05D44 1216 aaKnown RBP17.8■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Anks4bQ8K3X6 423 aa17.8■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Zbtb7cQ8VCZ7 619 aa17.8■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Pds5bQ4VA53 1446 aaKnown RBP17.79■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Chic2Q9D9G3 165 aa17.78■□□□□ 0.44
Chrna3-201ENSMUST00000034851 Csrnp3P59055 597 aa17.77■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Ccdc18Q640L5 1455 aa17.76■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Smarca4Q3TKT4 1613 aaKnown RBP17.75■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Cttnbp2B9EJA2 1648 aa17.73■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Rapgef2Q8CHG7 1496 aa17.73■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Gm38655A0A286YDK6 273 aa17.72■□□□□ 0.43
Chrna3-201ENSMUST00000034851 Fkbp15Q6P9Q6 1216 aaKnown RBP17.69■□□□□ 0.42
Chrna3-201ENSMUST00000034851 Ccer2J3QPU5 274 aa17.68■□□□□ 0.42
Chrna3-201ENSMUST00000034851 Atad2bE9Q166 1460 aaKnown RBP17.64■□□□□ 0.41
Chrna3-201ENSMUST00000034851 Anp32bQ9EST5 272 aaKnown RBP17.6■□□□□ 0.41
Chrna3-201ENSMUST00000034851 Hnrnpul2Q00PI9 745 aaKnown RBP17.59■□□□□ 0.41
Chrna3-201ENSMUST00000034851 Zbtb4Q5F293 982 aa17.59■□□□□ 0.41
Chrna3-201ENSMUST00000034851 Os9Q8K2C7 672 aa17.58■□□□□ 0.41
Chrna3-201ENSMUST00000034851 Ifnlr1Q8CGK5 535 aa17.55■□□□□ 0.4
Chrna3-201ENSMUST00000034851 Iqgap2Q3UQ44 1575 aa17.54■□□□□ 0.4
Chrna3-201ENSMUST00000034851 Cc2d2aQ8CFW7 1633 aa17.54■□□□□ 0.4
Chrna3-201ENSMUST00000034851 BicraF8VPZ9 1578 aa17.52■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms