RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Rhox8Q6VSS7 320 aa19.26■□□□□ 0.67
Herc6-201ENSMUST00000031817 NischQ80TM9 1593 aa18.02■□□□□ 0.48
Herc6-201ENSMUST00000031817 Ccdc136Q3TVA9 1136 aa17.23■□□□□ 0.35
Herc6-201ENSMUST00000031817 Esf1Q3V1V3 845 aaKnown RBP17.13■□□□□ 0.33
Herc6-201ENSMUST00000031817 Trim41Q5NCC3 630 aa17.09■□□□□ 0.33
Herc6-201ENSMUST00000031817 Cngb1E1AZ71 1325 aa17.01■□□□□ 0.31
Herc6-201ENSMUST00000031817 Rpgrip1Q9EPQ2 1331 aa16.96■□□□□ 0.31
Herc6-201ENSMUST00000031817 Abcc9P70170 1546 aa16.95■□□□□ 0.3
Herc6-201ENSMUST00000031817 Abcc8B2RUS7 1588 aa16.63■□□□□ 0.25
Herc6-201ENSMUST00000031817 Ehmt2Q9Z148 1263 aaKnown RBP16.63■□□□□ 0.25
Herc6-201ENSMUST00000031817 Gab3Q8BSM5 595 aa16.62■□□□□ 0.25
Herc6-201ENSMUST00000031817 Zeb1Q64318 1117 aa16.61■□□□□ 0.25
Herc6-201ENSMUST00000031817 Npm2Q80W85 207 aa16.61■□□□□ 0.25
Herc6-201ENSMUST00000031817 Rtl1Q7M732 1744 aa16.47■□□□□ 0.23
Herc6-201ENSMUST00000031817 Ccdc180J3QNE4 1664 aa16.46■□□□□ 0.23
Herc6-201ENSMUST00000031817 Zcchc6Q5BLK4 1491 aaKnown RBP16.43■□□□□ 0.22
Herc6-201ENSMUST00000031817 Myt1lP97500 1187 aa16.38■□□□□ 0.21
Herc6-201ENSMUST00000031817 Gm35339A0A140LHH9 1649 aa16.35■□□□□ 0.21
Herc6-201ENSMUST00000031817 HrcG5E8J6 738 aa16.32■□□□□ 0.2
Herc6-201ENSMUST00000031817 Las1lA2BE28 776 aaKnown RBP16.3■□□□□ 0.2
Herc6-201ENSMUST00000031817 Ube2uB1AUC4 352 aa16.28■□□□□ 0.2
Herc6-201ENSMUST00000031817 Wdr66E9Q743 1299 aa16.11■□□□□ 0.17
Herc6-201ENSMUST00000031817 Il27Q8K3I6 234 aa16.11■□□□□ 0.17
Herc6-201ENSMUST00000031817 NefmP08553 848 aa15.93■□□□□ 0.14
Herc6-201ENSMUST00000031817 UbtfP25976 765 aaKnown RBP15.93■□□□□ 0.14
Herc6-201ENSMUST00000031817 Acin1Q9JIX8 1338 aaKnown RBP15.92■□□□□ 0.14
Herc6-201ENSMUST00000031817 Rb1cc1Q9ESK9 1588 aa15.83■□□□□ 0.12
Herc6-201ENSMUST00000031817 Brd4Q9ESU6 1400 aaKnown RBP15.8■□□□□ 0.12
Herc6-201ENSMUST00000031817 NacadQ5SWP3 1504 aa15.79■□□□□ 0.12
Herc6-201ENSMUST00000031817 Npm1Q61937 292 aaKnown RBP15.74■□□□□ 0.11
Herc6-201ENSMUST00000031817 Ap3b1Q9Z1T1 1105 aa15.62■□□□□ 0.09
Herc6-201ENSMUST00000031817 Dcaf1Q80TR8 1506 aa15.54■□□□□ 0.08
Herc6-201ENSMUST00000031817 Fam50aQ9WV03 339 aaKnown RBP15.54■□□□□ 0.08
Herc6-201ENSMUST00000031817 Baz1aO88379 1555 aa15.53■□□□□ 0.08
Herc6-201ENSMUST00000031817 Stra8P70278 393 aa15.49■□□□□ 0.07
Herc6-201ENSMUST00000031817 Cep164Q5DU05 1446 aa15.42■□□□□ 0.06
Herc6-201ENSMUST00000031817 Pelp1Q9DBD5 1123 aaKnown RBP15.4■□□□□ 0.06
Herc6-201ENSMUST00000031817 Kdm5dQ62240 1548 aa15.4■□□□□ 0.06
Herc6-201ENSMUST00000031817 Ubl4bQ9CQ84 188 aa15.39■□□□□ 0.05
Herc6-201ENSMUST00000031817 NclP09405 707 aaKnown RBP15.35■□□□□ 0.05
Herc6-201ENSMUST00000031817 Chic1Q8CBW7 227 aa15.3■□□□□ 0.04
Herc6-201ENSMUST00000031817 Lmod2Q3UHZ5 550 aa15.27■□□□□ 0.04
Herc6-201ENSMUST00000031817 Anp32bQ9EST5 272 aaKnown RBP15.25■□□□□ 0.03
Herc6-201ENSMUST00000031817 Plekhg3Q4VAC9 1341 aa15.25■□□□□ 0.03
Herc6-201ENSMUST00000031817 TonslQ6NZL6 1363 aa15.24■□□□□ 0.03
Herc6-201ENSMUST00000031817 Mier1Q5UAK0 511 aa15.23■□□□□ 0.03
Herc6-201ENSMUST00000031817 Neurod1Q60867 357 aa15.23■□□□□ 0.03
Herc6-201ENSMUST00000031817 Ercc6F8VPZ5 1481 aa15.22■□□□□ 0.03
Herc6-201ENSMUST00000031817 Clip1Q922J3 1391 aa15.21■□□□□ 0.03
Herc6-201ENSMUST00000031817 Golga3P55937 1487 aa15.19■□□□□ 0.02
Herc6-201ENSMUST00000031817 Os9Q8K2C7 672 aa15.19■□□□□ 0.02
Herc6-201ENSMUST00000031817 Slc24a1Q91WD8 1130 aa15.19■□□□□ 0.02
Herc6-201ENSMUST00000031817 Rsf1E9PWW9 1441 aaKnown RBP15.18■□□□□ 0.02
Herc6-201ENSMUST00000031817 Cdk11bP24788 784 aaKnown RBP15.14■□□□□ 0.01
Herc6-201ENSMUST00000031817 NrdcQ8BHG1 1161 aa15.14■□□□□ 0.01
Herc6-201ENSMUST00000031817 Kif15Q6P9L6 1387 aa15.11■□□□□ 0.01
Herc6-201ENSMUST00000031817 Pds5bQ4VA53 1446 aaKnown RBP15.08■□□□□ 0
Herc6-201ENSMUST00000031817 Sycp2Q9CUU3 1500 aa15.07■□□□□ 0
Herc6-201ENSMUST00000031817 Pcgf6Q99NA9 353 aa15.05■□□□□ -0
Herc6-201ENSMUST00000031817 CenpbP27790 599 aa15.04■□□□□ -0
Herc6-201ENSMUST00000031817 Ccdc18Q640L5 1455 aa15.03■□□□□ -0
Herc6-201ENSMUST00000031817 Crybg2B7ZCC2 1516 aa15.03■□□□□ -0
Herc6-201ENSMUST00000031817 Hnrnpul2Q00PI9 745 aaKnown RBP15.02□□□□□ -0.01
Herc6-201ENSMUST00000031817 Ifnlr1Q8CGK5 535 aa15.02□□□□□ -0.01
Herc6-201ENSMUST00000031817 Hdac5Q9Z2V6 1113 aa15.02□□□□□ -0.01
Herc6-201ENSMUST00000031817 Nop58Q6DFW4 536 aaKnown RBP15.01□□□□□ -0.01
Herc6-201ENSMUST00000031817 Ccer2J3QPU5 274 aa15□□□□□ -0.01
Herc6-201ENSMUST00000031817 Zbtb7cQ8VCZ7 619 aa14.99□□□□□ -0.01
Herc6-201ENSMUST00000031817 Fkbp15Q6P9Q6 1216 aaKnown RBP14.98□□□□□ -0.01
Herc6-201ENSMUST00000031817 Tnnt3Q9QZ47 272 aa14.98□□□□□ -0.01
Herc6-201ENSMUST00000031817 Gm13697A2AK42 830 aa14.92□□□□□ -0.02
Herc6-201ENSMUST00000031817 Setd5Q5XJV7 1441 aa14.92□□□□□ -0.02
Herc6-201ENSMUST00000031817 BlmO88700 1416 aa14.89□□□□□ -0.03
Herc6-201ENSMUST00000031817 ScribQ80U72 1612 aa14.89□□□□□ -0.03
Herc6-201ENSMUST00000031817 Supt5hO55201 1082 aaKnown RBP14.88□□□□□ -0.03
Herc6-201ENSMUST00000031817 ClspnQ80YR7 1315 aa14.86□□□□□ -0.03
Herc6-201ENSMUST00000031817 Ppargc1bQ8VHJ7 1014 aa14.86□□□□□ -0.03
Herc6-201ENSMUST00000031817 NeflP08551 543 aa14.84□□□□□ -0.03
Herc6-201ENSMUST00000031817 Erich6D3Z6S9 713 aa14.82□□□□□ -0.04
Herc6-201ENSMUST00000031817 Eea1Q8BL66 1411 aa14.8□□□□□ -0.04
Herc6-201ENSMUST00000031817 Eid3Q3V124 375 aa14.8□□□□□ -0.04
Herc6-201ENSMUST00000031817 Clstn2Q9ER65 966 aa14.79□□□□□ -0.04
Herc6-201ENSMUST00000031817 Fmn1Q05860 1466 aa14.79□□□□□ -0.04
Herc6-201ENSMUST00000031817 Ttbk1Q6PCN3 1308 aa14.77□□□□□ -0.05
Herc6-201ENSMUST00000031817 Eif5bQ05D44 1216 aaKnown RBP14.75□□□□□ -0.05
Herc6-201ENSMUST00000031817 Smarca2Q6DIC0 1577 aa14.74□□□□□ -0.05
Herc6-201ENSMUST00000031817 CftrP26361 1476 aa14.74□□□□□ -0.05
Herc6-201ENSMUST00000031817 Atad2bE9Q166 1460 aaKnown RBP14.73□□□□□ -0.05
Herc6-201ENSMUST00000031817 Chic2Q9D9G3 165 aa14.73□□□□□ -0.05
Herc6-201ENSMUST00000031817 Atp1b4Q99ME6 356 aa14.72□□□□□ -0.05
Herc6-201ENSMUST00000031817 Arhgap27A2AB59 869 aa14.67□□□□□ -0.06
Herc6-201ENSMUST00000031817 Gm13695A2AK44 830 aa14.66□□□□□ -0.06
Herc6-201ENSMUST00000031817 Cecr2E9Q2Z1 1453 aa14.66□□□□□ -0.06
Herc6-201ENSMUST00000031817 Phldb1Q6PDH0 1371 aaKnown RBP14.65□□□□□ -0.06
Herc6-201ENSMUST00000031817 Ccdc88bQ4QRL3 1481 aa14.64□□□□□ -0.07
Herc6-201ENSMUST00000031817 Smarca4Q3TKT4 1613 aaKnown RBP14.64□□□□□ -0.07
Herc6-201ENSMUST00000031817 Zbtb4Q5F293 982 aa14.62□□□□□ -0.07
Herc6-201ENSMUST00000031817 Nlrp6Q91WS2 869 aa14.6□□□□□ -0.07
Herc6-201ENSMUST00000031817 Cux2P70298 1426 aa14.58□□□□□ -0.08
Herc6-201ENSMUST00000031817 Cep162Q6ZQ06 1403 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms