RNA–Protein interactions for RNA: ENSMUST00000031668.9

Col1a2-201, Transcript of Collagen alpha-2(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a2, Length 5,348 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2-201ENSMUST00000031668 Rhox8Q6VSS7 320 aa24.27■■□□□ 1.48
Col1a2-201ENSMUST00000031668 Rpgrip1Q9EPQ2 1331 aa22.63■■□□□ 1.21
Col1a2-201ENSMUST00000031668 NischQ80TM9 1593 aa22.04■■□□□ 1.12
Col1a2-201ENSMUST00000031668 Ehmt2Q9Z148 1263 aaKnown RBP21.82■■□□□ 1.08
Col1a2-201ENSMUST00000031668 Esf1Q3V1V3 845 aaKnown RBP21.72■■□□□ 1.07
Col1a2-201ENSMUST00000031668 Ccdc136Q3TVA9 1136 aa21.65■■□□□ 1.06
Col1a2-201ENSMUST00000031668 Cngb1E1AZ71 1325 aa21.41■■□□□ 1.02
Col1a2-201ENSMUST00000031668 Las1lA2BE28 776 aaKnown RBP21.36■■□□□ 1.01
Col1a2-201ENSMUST00000031668 Trim41Q5NCC3 630 aa21.36■■□□□ 1.01
Col1a2-201ENSMUST00000031668 Zeb1Q64318 1117 aa21.24■□□□□ 0.99
Col1a2-201ENSMUST00000031668 Wdr66E9Q743 1299 aa21.16■□□□□ 0.98
Col1a2-201ENSMUST00000031668 Gab3Q8BSM5 595 aa21.13■□□□□ 0.97
Col1a2-201ENSMUST00000031668 Ccdc180J3QNE4 1664 aa21.11■□□□□ 0.97
Col1a2-201ENSMUST00000031668 Acin1Q9JIX8 1338 aaKnown RBP21.05■□□□□ 0.96
Col1a2-201ENSMUST00000031668 Rtl1Q7M732 1744 aa21.02■□□□□ 0.96
Col1a2-201ENSMUST00000031668 Npm2Q80W85 207 aa20.96■□□□□ 0.95
Col1a2-201ENSMUST00000031668 Abcc9P70170 1546 aa20.81■□□□□ 0.92
Col1a2-201ENSMUST00000031668 HrcG5E8J6 738 aa20.78■□□□□ 0.92
Col1a2-201ENSMUST00000031668 Ube2uB1AUC4 352 aa20.77■□□□□ 0.92
Col1a2-201ENSMUST00000031668 NefmP08553 848 aa20.73■□□□□ 0.91
Col1a2-201ENSMUST00000031668 Myt1lP97500 1187 aa20.71■□□□□ 0.91
Col1a2-201ENSMUST00000031668 Pelp1Q9DBD5 1123 aaKnown RBP20.7■□□□□ 0.9
Col1a2-201ENSMUST00000031668 Il27Q8K3I6 234 aa20.5■□□□□ 0.87
Col1a2-201ENSMUST00000031668 UbtfP25976 765 aaKnown RBP20.45■□□□□ 0.86
Col1a2-201ENSMUST00000031668 Gm35339A0A140LHH9 1649 aa20.41■□□□□ 0.86
Col1a2-201ENSMUST00000031668 CenpbP27790 599 aa20.36■□□□□ 0.85
Col1a2-201ENSMUST00000031668 Stra8P70278 393 aa20.26■□□□□ 0.83
Col1a2-201ENSMUST00000031668 Zcchc6Q5BLK4 1491 aaKnown RBP20.24■□□□□ 0.83
Col1a2-201ENSMUST00000031668 Pcgf6Q99NA9 353 aa20.23■□□□□ 0.83
Col1a2-201ENSMUST00000031668 Abcc8B2RUS7 1588 aa20.16■□□□□ 0.82
Col1a2-201ENSMUST00000031668 Cdk11bP24788 784 aaKnown RBP20.07■□□□□ 0.8
Col1a2-201ENSMUST00000031668 Npm1Q61937 292 aaKnown RBP19.94■□□□□ 0.78
Col1a2-201ENSMUST00000031668 Slc24a1Q91WD8 1130 aa19.87■□□□□ 0.77
Col1a2-201ENSMUST00000031668 Nop58Q6DFW4 536 aaKnown RBP19.85■□□□□ 0.77
Col1a2-201ENSMUST00000031668 Supt5hO55201 1082 aaKnown RBP19.83■□□□□ 0.77
Col1a2-201ENSMUST00000031668 Tnnt3Q9QZ47 272 aa19.83■□□□□ 0.76
Col1a2-201ENSMUST00000031668 Ap3b1Q9Z1T1 1105 aa19.75■□□□□ 0.75
Col1a2-201ENSMUST00000031668 TonslQ6NZL6 1363 aa19.75■□□□□ 0.75
Col1a2-201ENSMUST00000031668 Mier1Q5UAK0 511 aa19.74■□□□□ 0.75
Col1a2-201ENSMUST00000031668 Myt1Q8CFC2 1127 aa19.74■□□□□ 0.75
Col1a2-201ENSMUST00000031668 Fam50aQ9WV03 339 aaKnown RBP19.74■□□□□ 0.75
Col1a2-201ENSMUST00000031668 NclP09405 707 aaKnown RBP19.7■□□□□ 0.74
Col1a2-201ENSMUST00000031668 NrdcQ8BHG1 1161 aa19.63■□□□□ 0.73
Col1a2-201ENSMUST00000031668 Dcaf1Q80TR8 1506 aa19.6■□□□□ 0.73
Col1a2-201ENSMUST00000031668 Amer1Q7TS75 1132 aa19.58■□□□□ 0.72
Col1a2-201ENSMUST00000031668 Anp32bQ9EST5 272 aaKnown RBP19.56■□□□□ 0.72
Col1a2-201ENSMUST00000031668 Ppargc1bQ8VHJ7 1014 aa19.53■□□□□ 0.72
Col1a2-201ENSMUST00000031668 Ifnlr1Q8CGK5 535 aa19.52■□□□□ 0.72
Col1a2-201ENSMUST00000031668 Ubl4bQ9CQ84 188 aa19.5■□□□□ 0.71
Col1a2-201ENSMUST00000031668 Neurod1Q60867 357 aa19.49■□□□□ 0.71
Col1a2-201ENSMUST00000031668 Cep164Q5DU05 1446 aa19.49■□□□□ 0.71
Col1a2-201ENSMUST00000031668 Brd4Q9ESU6 1400 aaKnown RBP19.47■□□□□ 0.71
Col1a2-201ENSMUST00000031668 Ttbk1Q6PCN3 1308 aa19.47■□□□□ 0.71
Col1a2-201ENSMUST00000031668 ClspnQ80YR7 1315 aa19.46■□□□□ 0.7
Col1a2-201ENSMUST00000031668 Rb1cc1Q9ESK9 1588 aa19.43■□□□□ 0.7
Col1a2-201ENSMUST00000031668 Os9Q8K2C7 672 aa19.4■□□□□ 0.7
Col1a2-201ENSMUST00000031668 Gm13697A2AK42 830 aa19.4■□□□□ 0.7
Col1a2-201ENSMUST00000031668 NeflP08551 543 aa19.39■□□□□ 0.69
Col1a2-201ENSMUST00000031668 Eif5bQ05D44 1216 aaKnown RBP19.38■□□□□ 0.69
Col1a2-201ENSMUST00000031668 Plekhg3Q4VAC9 1341 aa19.34■□□□□ 0.69
Col1a2-201ENSMUST00000031668 Rtl5Q5DTT4 599 aa19.29■□□□□ 0.68
Col1a2-201ENSMUST00000031668 Plppr3Q7TPB0 716 aa19.25■□□□□ 0.67
Col1a2-201ENSMUST00000031668 Chic1Q8CBW7 227 aa19.23■□□□□ 0.67
Col1a2-201ENSMUST00000031668 Lmod2Q3UHZ5 550 aa19.21■□□□□ 0.67
Col1a2-201ENSMUST00000031668 4933416C03RikQ3V063 378 aa19.19■□□□□ 0.66
Col1a2-201ENSMUST00000031668 Fkbp15Q6P9Q6 1216 aaKnown RBP19.19■□□□□ 0.66
Col1a2-201ENSMUST00000031668 Clip1Q922J3 1391 aa19.18■□□□□ 0.66
Col1a2-201ENSMUST00000031668 Hnrnpul2Q00PI9 745 aaKnown RBP19.15■□□□□ 0.66
Col1a2-201ENSMUST00000031668 Zbtb7cQ8VCZ7 619 aa19.15■□□□□ 0.66
Col1a2-201ENSMUST00000031668 Sall2Q9QX96 1004 aa19.13■□□□□ 0.65
Col1a2-201ENSMUST00000031668 Anks4bQ8K3X6 423 aa19.09■□□□□ 0.65
Col1a2-201ENSMUST00000031668 Anp32aO35381 247 aa19.09■□□□□ 0.65
Col1a2-201ENSMUST00000031668 NacadQ5SWP3 1504 aa19.02■□□□□ 0.64
Col1a2-201ENSMUST00000031668 Baz1aO88379 1555 aa19.02■□□□□ 0.64
Col1a2-201ENSMUST00000031668 Ccer2J3QPU5 274 aa19■□□□□ 0.63
Col1a2-201ENSMUST00000031668 Gm13695A2AK44 830 aa18.98■□□□□ 0.63
Col1a2-201ENSMUST00000031668 Eid3Q3V124 375 aa18.97■□□□□ 0.63
Col1a2-201ENSMUST00000031668 Atp1b4Q99ME6 356 aa18.92■□□□□ 0.62
Col1a2-201ENSMUST00000031668 Ercc6F8VPZ5 1481 aa18.89■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Safb2Q80YR5 991 aaKnown RBP18.88■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Aplp2Q06335 707 aa18.88■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Csrnp3P59055 597 aa18.87■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Mapk8ip2Q9ERE9 830 aa18.86■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Erich6D3Z6S9 713 aa18.86■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Golga3P55937 1487 aa18.84■□□□□ 0.61
Col1a2-201ENSMUST00000031668 Hdac5Q9Z2V6 1113 aa18.8■□□□□ 0.6
Col1a2-201ENSMUST00000031668 4930567H17RikQ3V0K5 233 aa18.8■□□□□ 0.6
Col1a2-201ENSMUST00000031668 BlmO88700 1416 aa18.72■□□□□ 0.59
Col1a2-201ENSMUST00000031668 Gm38655A0A286YDK6 273 aa18.71■□□□□ 0.59
Col1a2-201ENSMUST00000031668 Nlrp6Q91WS2 869 aa18.7■□□□□ 0.58
Col1a2-201ENSMUST00000031668 Rsf1E9PWW9 1441 aaKnown RBP18.7■□□□□ 0.58
Col1a2-201ENSMUST00000031668 Kif15Q6P9L6 1387 aa18.7■□□□□ 0.58
Col1a2-201ENSMUST00000031668 Calr4Q3TQS0 420 aa18.67■□□□□ 0.58
Col1a2-201ENSMUST00000031668 Setd5Q5XJV7 1441 aa18.66■□□□□ 0.58
Col1a2-201ENSMUST00000031668 Zbtb4Q5F293 982 aa18.66■□□□□ 0.58
Col1a2-201ENSMUST00000031668 DaxxO35613 739 aa18.61■□□□□ 0.57
Col1a2-201ENSMUST00000031668 Kdm5dQ62240 1548 aa18.61■□□□□ 0.57
Col1a2-201ENSMUST00000031668 DiexfQ8BTT6 772 aaKnown RBP18.59■□□□□ 0.57
Col1a2-201ENSMUST00000031668 Upf2A2AT37 1269 aaKnown RBP18.58■□□□□ 0.57
Col1a2-201ENSMUST00000031668 Chic2Q9D9G3 165 aa18.58■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms