RNA–Protein interactions for RNA: ENSMUST00000031382.13

Clip1-201, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-201ENSMUST00000031382 Rhox8Q6VSS7 320 aa16.89■□□□□ 0.3
Clip1-201ENSMUST00000031382 NischQ80TM9 1593 aa16.59■□□□□ 0.25
Clip1-201ENSMUST00000031382 Abcc9P70170 1546 aa15.73■□□□□ 0.11
Clip1-201ENSMUST00000031382 Ehmt2Q9Z148 1263 aaKnown RBP15.63■□□□□ 0.09
Clip1-201ENSMUST00000031382 Abcc8B2RUS7 1588 aa15.55■□□□□ 0.08
Clip1-201ENSMUST00000031382 Rpgrip1Q9EPQ2 1331 aa15.47■□□□□ 0.07
Clip1-201ENSMUST00000031382 Ccdc136Q3TVA9 1136 aa15.42■□□□□ 0.06
Clip1-201ENSMUST00000031382 Gm35339A0A140LHH9 1649 aa15.4■□□□□ 0.06
Clip1-201ENSMUST00000031382 Esf1Q3V1V3 845 aaKnown RBP15□□□□□ -0.01
Clip1-201ENSMUST00000031382 Cngb1E1AZ71 1325 aa14.94□□□□□ -0.02
Clip1-201ENSMUST00000031382 Trim41Q5NCC3 630 aa14.87□□□□□ -0.03
Clip1-201ENSMUST00000031382 Zcchc6Q5BLK4 1491 aaKnown RBP14.84□□□□□ -0.03
Clip1-201ENSMUST00000031382 Gab3Q8BSM5 595 aa14.84□□□□□ -0.03
Clip1-201ENSMUST00000031382 Las1lA2BE28 776 aaKnown RBP14.83□□□□□ -0.04
Clip1-201ENSMUST00000031382 Zeb1Q64318 1117 aa14.81□□□□□ -0.04
Clip1-201ENSMUST00000031382 Wdr66E9Q743 1299 aa14.71□□□□□ -0.05
Clip1-201ENSMUST00000031382 Acin1Q9JIX8 1338 aaKnown RBP14.71□□□□□ -0.05
Clip1-201ENSMUST00000031382 Rb1cc1Q9ESK9 1588 aa14.53□□□□□ -0.08
Clip1-201ENSMUST00000031382 NacadQ5SWP3 1504 aa14.52□□□□□ -0.09
Clip1-201ENSMUST00000031382 Kdm5dQ62240 1548 aa14.44□□□□□ -0.1
Clip1-201ENSMUST00000031382 Myt1lP97500 1187 aa14.43□□□□□ -0.1
Clip1-201ENSMUST00000031382 Pcgf6Q99NA9 353 aa14.39□□□□□ -0.11
Clip1-201ENSMUST00000031382 Il27Q8K3I6 234 aa14.38□□□□□ -0.11
Clip1-201ENSMUST00000031382 Npm2Q80W85 207 aa14.38□□□□□ -0.11
Clip1-201ENSMUST00000031382 ScribQ80U72 1612 aa14.37□□□□□ -0.11
Clip1-201ENSMUST00000031382 HrcG5E8J6 738 aa14.37□□□□□ -0.11
Clip1-201ENSMUST00000031382 UbtfP25976 765 aaKnown RBP14.32□□□□□ -0.12
Clip1-201ENSMUST00000031382 Ccdc180J3QNE4 1664 aa14.31□□□□□ -0.12
Clip1-201ENSMUST00000031382 Rtl1Q7M732 1744 aa14.29□□□□□ -0.12
Clip1-201ENSMUST00000031382 Ube2uB1AUC4 352 aa14.27□□□□□ -0.13
Clip1-201ENSMUST00000031382 NefmP08553 848 aa14.27□□□□□ -0.13
Clip1-201ENSMUST00000031382 Baz1aO88379 1555 aa14.22□□□□□ -0.13
Clip1-201ENSMUST00000031382 CenpbP27790 599 aa14.21□□□□□ -0.13
Clip1-201ENSMUST00000031382 Dcaf1Q80TR8 1506 aa14.19□□□□□ -0.14
Clip1-201ENSMUST00000031382 Ppargc1bQ8VHJ7 1014 aa14.15□□□□□ -0.14
Clip1-201ENSMUST00000031382 Supt5hO55201 1082 aaKnown RBP14.15□□□□□ -0.14
Clip1-201ENSMUST00000031382 Myt1Q8CFC2 1127 aa14.07□□□□□ -0.16
Clip1-201ENSMUST00000031382 Brd4Q9ESU6 1400 aaKnown RBP14.07□□□□□ -0.16
Clip1-201ENSMUST00000031382 DiexfQ8BTT6 772 aaKnown RBP14.06□□□□□ -0.16
Clip1-201ENSMUST00000031382 Sycp2Q9CUU3 1500 aa14.05□□□□□ -0.16
Clip1-201ENSMUST00000031382 Amer1Q7TS75 1132 aa13.99□□□□□ -0.17
Clip1-201ENSMUST00000031382 Cdk11bP24788 784 aaKnown RBP13.98□□□□□ -0.17
Clip1-201ENSMUST00000031382 Chic1Q8CBW7 227 aa13.97□□□□□ -0.17
Clip1-201ENSMUST00000031382 Npm1Q61937 292 aaKnown RBP13.93□□□□□ -0.18
Clip1-201ENSMUST00000031382 Slc24a1Q91WD8 1130 aa13.93□□□□□ -0.18
Clip1-201ENSMUST00000031382 Pelp1Q9DBD5 1123 aaKnown RBP13.92□□□□□ -0.18
Clip1-201ENSMUST00000031382 Ubl4bQ9CQ84 188 aa13.92□□□□□ -0.18
Clip1-201ENSMUST00000031382 Nop58Q6DFW4 536 aaKnown RBP13.89□□□□□ -0.19
Clip1-201ENSMUST00000031382 Mier1Q5UAK0 511 aa13.88□□□□□ -0.19
Clip1-201ENSMUST00000031382 Ap3b1Q9Z1T1 1105 aa13.86□□□□□ -0.19
Clip1-201ENSMUST00000031382 Ttbk1Q6PCN3 1308 aa13.81□□□□□ -0.2
Clip1-201ENSMUST00000031382 Cecr2E9Q2Z1 1453 aa13.81□□□□□ -0.2
Clip1-201ENSMUST00000031382 Neurod1Q60867 357 aa13.77□□□□□ -0.21
Clip1-201ENSMUST00000031382 Gm38655A0A286YDK6 273 aa13.76□□□□□ -0.21
Clip1-201ENSMUST00000031382 Stra8P70278 393 aa13.74□□□□□ -0.21
Clip1-201ENSMUST00000031382 Crybg2B7ZCC2 1516 aa13.73□□□□□ -0.21
Clip1-201ENSMUST00000031382 Fam50aQ9WV03 339 aaKnown RBP13.73□□□□□ -0.21
Clip1-201ENSMUST00000031382 Pds5bQ4VA53 1446 aaKnown RBP13.7□□□□□ -0.22
Clip1-201ENSMUST00000031382 TonslQ6NZL6 1363 aa13.68□□□□□ -0.22
Clip1-201ENSMUST00000031382 Ercc6F8VPZ5 1481 aa13.67□□□□□ -0.22
Clip1-201ENSMUST00000031382 NclP09405 707 aaKnown RBP13.67□□□□□ -0.22
Clip1-201ENSMUST00000031382 Golga3P55937 1487 aa13.67□□□□□ -0.22
Clip1-201ENSMUST00000031382 Kif15Q6P9L6 1387 aa13.66□□□□□ -0.22
Clip1-201ENSMUST00000031382 Smarca2Q6DIC0 1577 aa13.66□□□□□ -0.22
Clip1-201ENSMUST00000031382 Sall2Q9QX96 1004 aa13.64□□□□□ -0.23
Clip1-201ENSMUST00000031382 Cep164Q5DU05 1446 aa13.63□□□□□ -0.23
Clip1-201ENSMUST00000031382 Plekhg3Q4VAC9 1341 aa13.6□□□□□ -0.23
Clip1-201ENSMUST00000031382 Rsf1E9PWW9 1441 aaKnown RBP13.58□□□□□ -0.24
Clip1-201ENSMUST00000031382 CftrP26361 1476 aa13.58□□□□□ -0.24
Clip1-201ENSMUST00000031382 Csrnp3P59055 597 aa13.57□□□□□ -0.24
Clip1-201ENSMUST00000031382 Lmod2Q3UHZ5 550 aa13.57□□□□□ -0.24
Clip1-201ENSMUST00000031382 Tnnt3Q9QZ47 272 aa13.55□□□□□ -0.24
Clip1-201ENSMUST00000031382 Eif5bQ05D44 1216 aaKnown RBP13.54□□□□□ -0.24
Clip1-201ENSMUST00000031382 Atad2bE9Q166 1460 aaKnown RBP13.53□□□□□ -0.24
Clip1-201ENSMUST00000031382 Synj1Q8CHC4 1574 aa13.52□□□□□ -0.25
Clip1-201ENSMUST00000031382 ClspnQ80YR7 1315 aa13.52□□□□□ -0.25
Clip1-201ENSMUST00000031382 BicraF8VPZ9 1578 aa13.51□□□□□ -0.25
Clip1-201ENSMUST00000031382 Mapk8ip2Q9ERE9 830 aa13.51□□□□□ -0.25
Clip1-201ENSMUST00000031382 Eid3Q3V124 375 aa13.5□□□□□ -0.25
Clip1-201ENSMUST00000031382 Ccdc88bQ4QRL3 1481 aa13.5□□□□□ -0.25
Clip1-201ENSMUST00000031382 Smarca4Q3TKT4 1613 aaKnown RBP13.48□□□□□ -0.25
Clip1-201ENSMUST00000031382 NrdcQ8BHG1 1161 aa13.48□□□□□ -0.25
Clip1-201ENSMUST00000031382 Ifnlr1Q8CGK5 535 aa13.44□□□□□ -0.26
Clip1-201ENSMUST00000031382 Fkbp15Q6P9Q6 1216 aaKnown RBP13.43□□□□□ -0.26
Clip1-201ENSMUST00000031382 Anks4bQ8K3X6 423 aa13.41□□□□□ -0.26
Clip1-201ENSMUST00000031382 1700123L14RikQ3V2K7 440 aa13.39□□□□□ -0.27
Clip1-201ENSMUST00000031382 Clip1Q922J3 1391 aa13.39□□□□□ -0.27
Clip1-201ENSMUST00000031382 Iqgap2Q3UQ44 1575 aa13.37□□□□□ -0.27
Clip1-201ENSMUST00000031382 Ccdc18Q640L5 1455 aa13.37□□□□□ -0.27
Clip1-201ENSMUST00000031382 Phldb1Q6PDH0 1371 aaKnown RBP13.35□□□□□ -0.27
Clip1-201ENSMUST00000031382 4933416C03RikQ3V063 378 aa13.32□□□□□ -0.28
Clip1-201ENSMUST00000031382 Cux2P70298 1426 aa13.31□□□□□ -0.28
Clip1-201ENSMUST00000031382 Bcl11aQ9QYE3 773 aa13.3□□□□□ -0.28
Clip1-201ENSMUST00000031382 Cttnbp2B9EJA2 1648 aa13.29□□□□□ -0.28
Clip1-201ENSMUST00000031382 Fmn1Q05860 1466 aa13.29□□□□□ -0.28
Clip1-201ENSMUST00000031382 Zbtb7cQ8VCZ7 619 aa13.27□□□□□ -0.28
Clip1-201ENSMUST00000031382 Aebp2Q9Z248 504 aaKnown RBP13.27□□□□□ -0.29
Clip1-201ENSMUST00000031382 Aplp2Q06335 707 aa13.26□□□□□ -0.29
Clip1-201ENSMUST00000031382 Anp32bQ9EST5 272 aaKnown RBP13.26□□□□□ -0.29
Clip1-201ENSMUST00000031382 Dnajc5bQ9CQ94 199 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms