RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 NischQ80TM9 1593 aa35,46■■■■□ 3,27
Shox2-201ENSMUST00000029422 Rhox8Q6VSS7 320 aa34,72■■■■□ 3,15
Shox2-201ENSMUST00000029422 Abcc9P70170 1546 aa34,23■■■■□ 3,07
Shox2-201ENSMUST00000029422 Gm35339A0A140LHH9 1649 aa33,78■■■■□ 3
Shox2-201ENSMUST00000029422 Rtl1Q7M732 1744 aa33,49■■■□□ 2,95
Shox2-201ENSMUST00000029422 Rpgrip1Q9EPQ2 1331 aa33,43■■■□□ 2,94
Shox2-201ENSMUST00000029422 Ccdc180J3QNE4 1664 aa33,35■■■□□ 2,93
Shox2-201ENSMUST00000029422 Abcc8B2RUS7 1588 aa33,3■■■□□ 2,92
Shox2-201ENSMUST00000029422 Ehmt2Q9Z148 1263 aaKnown RBP33,09■■■□□ 2,89
Shox2-201ENSMUST00000029422 Acin1Q9JIX8 1338 aaKnown RBP32,81■■■□□ 2,84
Shox2-201ENSMUST00000029422 Zcchc6Q5BLK4 1491 aaKnown RBP32,38■■■□□ 2,77
Shox2-201ENSMUST00000029422 Pcgf6Q99NA9 353 aa32,2■■■□□ 2,74
Shox2-201ENSMUST00000029422 Ccdc136Q3TVA9 1136 aa32,14■■■□□ 2,74
Shox2-201ENSMUST00000029422 HrcG5E8J6 738 aa31,96■■■□□ 2,71
Shox2-201ENSMUST00000029422 Dcaf1Q80TR8 1506 aa31,77■■■□□ 2,68
Shox2-201ENSMUST00000029422 Trim41Q5NCC3 630 aa31,58■■■□□ 2,65
Shox2-201ENSMUST00000029422 Supt5hO55201 1082 aaKnown RBP31,53■■■□□ 2,64
Shox2-201ENSMUST00000029422 Rb1cc1Q9ESK9 1588 aa31,14■■■□□ 2,57
Shox2-201ENSMUST00000029422 Zeb1Q64318 1117 aa31,06■■■□□ 2,56
Shox2-201ENSMUST00000029422 Neurod1Q60867 357 aa31,03■■■□□ 2,56
Shox2-201ENSMUST00000029422 Gab3Q8BSM5 595 aa30,85■■■□□ 2,53
Shox2-201ENSMUST00000029422 Cep164Q5DU05 1446 aa30,7■■■□□ 2,5
Shox2-201ENSMUST00000029422 Baz1aO88379 1555 aa30,66■■■□□ 2,5
Shox2-201ENSMUST00000029422 ScribQ80U72 1612 aa30,63■■■□□ 2,49
Shox2-201ENSMUST00000029422 Cngb1E1AZ71 1325 aa30,63■■■□□ 2,49
Shox2-201ENSMUST00000029422 Chic1Q8CBW7 227 aa30,5■■■□□ 2,47
Shox2-201ENSMUST00000029422 Mier1Q5UAK0 511 aa30,48■■■□□ 2,47
Shox2-201ENSMUST00000029422 Sall2Q9QX96 1004 aa30,45■■■□□ 2,47
Shox2-201ENSMUST00000029422 NefmP08553 848 aa30,4■■■□□ 2,46
Shox2-201ENSMUST00000029422 Kdm5dQ62240 1548 aa30,36■■■□□ 2,45
Shox2-201ENSMUST00000029422 Las1lA2BE28 776 aaKnown RBP30,34■■■□□ 2,45
Shox2-201ENSMUST00000029422 Rsf1E9PWW9 1441 aaKnown RBP30,21■■■□□ 2,43
Shox2-201ENSMUST00000029422 Wdr66E9Q743 1299 aa30,13■■■□□ 2,41
Shox2-201ENSMUST00000029422 Csrnp3P59055 597 aa30,1■■■□□ 2,41
Shox2-201ENSMUST00000029422 1700123L14RikQ3V2K7 440 aa30,07■■■□□ 2,4
Shox2-201ENSMUST00000029422 Ppargc1bQ8VHJ7 1014 aa30,02■■■□□ 2,4
Shox2-201ENSMUST00000029422 Smarca2Q6DIC0 1577 aa29,98■■■□□ 2,39
Shox2-201ENSMUST00000029422 UbtfP25976 765 aaKnown RBP29,97■■■□□ 2,39
Shox2-201ENSMUST00000029422 Anks4bQ8K3X6 423 aa29,95■■■□□ 2,39
Shox2-201ENSMUST00000029422 Ccdc88bQ4QRL3 1481 aa29,91■■■□□ 2,38
Shox2-201ENSMUST00000029422 NacadQ5SWP3 1504 aa29,9■■■□□ 2,38
Shox2-201ENSMUST00000029422 Aebp2Q9Z248 504 aaKnown RBP29,88■■■□□ 2,37
Shox2-201ENSMUST00000029422 Esf1Q3V1V3 845 aaKnown RBP29,74■■■□□ 2,35
Shox2-201ENSMUST00000029422 Cdk11bP24788 784 aaKnown RBP29,7■■■□□ 2,35
Shox2-201ENSMUST00000029422 Nop58Q6DFW4 536 aaKnown RBP29,67■■■□□ 2,34
Shox2-201ENSMUST00000029422 Gm38655A0A286YDK6 273 aa29,61■■■□□ 2,33
Shox2-201ENSMUST00000029422 Crybg2B7ZCC2 1516 aa29,58■■■□□ 2,33
Shox2-201ENSMUST00000029422 Brd4Q9ESU6 1400 aaKnown RBP29,57■■■□□ 2,32
Shox2-201ENSMUST00000029422 Golga3P55937 1487 aa29,55■■■□□ 2,32
Shox2-201ENSMUST00000029422 Myt1lP97500 1187 aa29,51■■■□□ 2,31
Shox2-201ENSMUST00000029422 ClspnQ80YR7 1315 aa29,48■■■□□ 2,31
Shox2-201ENSMUST00000029422 Cecr2E9Q2Z1 1453 aa29,46■■■□□ 2,31
Shox2-201ENSMUST00000029422 Aplp2Q06335 707 aa29,33■■■□□ 2,29
Shox2-201ENSMUST00000029422 CenpbP27790 599 aa29,32■■■□□ 2,28
Shox2-201ENSMUST00000029422 TonslQ6NZL6 1363 aa29,27■■■□□ 2,28
Shox2-201ENSMUST00000029422 Synj1Q8CHC4 1574 aa29,25■■■□□ 2,27
Shox2-201ENSMUST00000029422 Sycp2Q9CUU3 1500 aa29,22■■■□□ 2,27
Shox2-201ENSMUST00000029422 Plekhg3Q4VAC9 1341 aa29,11■■■□□ 2,25
Shox2-201ENSMUST00000029422 Npm2Q80W85 207 aa29,06■■■□□ 2,24
Shox2-201ENSMUST00000029422 CftrP26361 1476 aa28,94■■■□□ 2,22
Shox2-201ENSMUST00000029422 Myt1Q8CFC2 1127 aa28,91■■■□□ 2,22
Shox2-201ENSMUST00000029422 Eid3Q3V124 375 aa28,89■■■□□ 2,21
Shox2-201ENSMUST00000029422 Rapgef2Q8CHG7 1496 aa28,87■■■□□ 2,21
Shox2-201ENSMUST00000029422 SafbD3YXK2 937 aaKnown RBP28,83■■■□□ 2,21
Shox2-201ENSMUST00000029422 Mapk8ip2Q9ERE9 830 aa28,82■■■□□ 2,2
Shox2-201ENSMUST00000029422 Cc2d2aQ8CFW7 1633 aa28,81■■■□□ 2,2
Shox2-201ENSMUST00000029422 Cep162Q6ZQ06 1403 aa28,81■■■□□ 2,2
Shox2-201ENSMUST00000029422 Ap3b1Q9Z1T1 1105 aa28,8■■■□□ 2,2
Shox2-201ENSMUST00000029422 Top2bQ64511 1612 aa28,8■■■□□ 2,2
Shox2-201ENSMUST00000029422 Clip1Q922J3 1391 aa28,79■■■□□ 2,2
Shox2-201ENSMUST00000029422 Hnrnpul2Q00PI9 745 aaKnown RBP28,79■■■□□ 2,2
Shox2-201ENSMUST00000029422 Fam71e1A1L3C1 212 aa28,69■■■□□ 2,18
Shox2-201ENSMUST00000029422 Cttnbp2B9EJA2 1648 aa28,52■■■□□ 2,16
Shox2-201ENSMUST00000029422 BicraF8VPZ9 1578 aa28,51■■■□□ 2,15
Shox2-201ENSMUST00000029422 Fmn1Q05860 1466 aa28,51■■■□□ 2,15
Shox2-201ENSMUST00000029422 Top2aQ01320 1528 aaKnown RBP28,48■■■□□ 2,15
Shox2-201ENSMUST00000029422 Ncapd3Q6ZQK0 1506 aa28,48■■■□□ 2,15
Shox2-201ENSMUST00000029422 Tnnt3Q9QZ47 272 aa28,48■■■□□ 2,15
Shox2-201ENSMUST00000029422 NclP09405 707 aaKnown RBP28,29■■■□□ 2,12
Shox2-201ENSMUST00000029422 DiexfQ8BTT6 772 aaKnown RBP28,29■■■□□ 2,12
Shox2-201ENSMUST00000029422 Il27Q8K3I6 234 aa28,28■■■□□ 2,12
Shox2-201ENSMUST00000029422 Fam50aQ9WV03 339 aaKnown RBP28,23■■■□□ 2,11
Shox2-201ENSMUST00000029422 Slc24a1Q91WD8 1130 aa28,17■■■□□ 2,1
Shox2-201ENSMUST00000029422 Smarca4Q3TKT4 1613 aaKnown RBP28,16■■■□□ 2,1
Shox2-201ENSMUST00000029422 Bcl11aQ9QYE3 773 aa28,15■■■□□ 2,1
Shox2-201ENSMUST00000029422 Eea1Q8BL66 1411 aa28,11■■■□□ 2,09
Shox2-201ENSMUST00000029422 Anp32aO35381 247 aa28,1■■■□□ 2,09
Shox2-201ENSMUST00000029422 Znf710Q3U288 666 aa28,1■■■□□ 2,09
Shox2-201ENSMUST00000029422 Setd5Q5XJV7 1441 aa28,1■■■□□ 2,09
Shox2-201ENSMUST00000029422 Arap1Q4LDD4 1452 aa28,08■■■□□ 2,09
Shox2-201ENSMUST00000029422 Stra8P70278 393 aa28,05■■■□□ 2,08
Shox2-201ENSMUST00000029422 Rpap1Q80TE0 1409 aa28,03■■■□□ 2,08
Shox2-201ENSMUST00000029422 Lmod2Q3UHZ5 550 aa28,02■■■□□ 2,08
Shox2-201ENSMUST00000029422 Arhgap35Q91YM2 1499 aa28,01■■■□□ 2,07
Shox2-201ENSMUST00000029422 Eif4g1Q6NZJ6 1600 aaKnown RBP27,97■■■□□ 2,07
Shox2-201ENSMUST00000029422 PtprkP35822 1457 aa27,96■■■□□ 2,07
Shox2-201ENSMUST00000029422 Calr4Q3TQS0 420 aa27,96■■■□□ 2,07
Shox2-201ENSMUST00000029422 BlmO88700 1416 aa27,96■■■□□ 2,07
Shox2-201ENSMUST00000029422 Nolc1E9Q5C9 702 aaKnown RBP27,95■■■□□ 2,07
Shox2-201ENSMUST00000029422 Baz1bQ9Z277 1479 aa27,94■■■□□ 2,06
Retrieved 100 of 22,080 RNA–protein pairs in 10,2 ms